Wall clock time and date at job start Sun Mar 7 2021 05:10:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35896 * 117.00336 * 2 1 4 4 C 1.38719 * 120.05357 * 180.02562 * 3 2 1 5 5 C 1.50692 * 120.03085 * 359.95461 * 4 3 2 6 6 H 1.09012 * 112.84898 * 9.67063 * 5 4 3 7 7 C 1.53785 * 113.61555 * 140.86327 * 5 4 3 8 8 C 1.53950 * 87.01858 * 139.95374 * 7 5 4 9 9 H 1.08995 * 113.74279 * 220.05396 * 8 7 5 10 10 N 1.46510 * 113.53556 * 89.19032 * 8 7 5 11 11 C 1.34773 * 119.99627 * 107.50449 * 10 8 7 12 12 O 1.21552 * 120.00627 * 0.02562 * 11 10 8 13 13 C 1.47852 * 119.99702 * 179.97438 * 11 10 8 14 14 C 1.39553 * 120.14515 * 353.76107 * 13 11 10 15 15 C 1.37978 * 119.85590 * 179.97438 * 14 13 11 16 16 C 1.50697 * 119.92913 * 179.97438 * 15 14 13 17 17 O 1.42904 * 109.47174 * 104.99893 * 16 15 14 18 18 Si 1.86293 * 109.47177 * 344.99691 * 16 15 14 19 19 C 1.38338 * 120.14016 * 0.02562 * 15 14 13 20 20 C 1.50698 * 119.85059 * 180.02562 * 19 15 14 21 21 C 1.38377 * 120.29647 * 359.97438 * 19 15 14 22 22 C 1.37937 * 120.14544 * 359.73915 * 21 19 15 23 23 C 1.50697 * 120.07878 * 180.27478 * 22 21 19 24 24 C 1.53780 * 87.11506 * 334.64005 * 8 7 5 25 25 C 1.38163 * 119.94041 * 179.97438 * 4 3 2 26 26 C 1.38250 * 120.05736 * 359.97438 * 25 4 3 27 27 C 1.38289 * 120.11155 * 359.75102 * 26 25 4 28 28 C 1.38125 * 120.05309 * 0.50133 * 27 26 25 29 29 H 1.08996 * 109.46724 * 300.00439 * 1 2 3 30 30 H 1.09004 * 109.46592 * 59.99692 * 1 2 3 31 31 H 1.08995 * 109.47714 * 179.97438 * 1 2 3 32 32 H 1.08999 * 113.61265 * 254.53429 * 7 5 4 33 33 H 1.08997 * 113.61052 * 25.43047 * 7 5 4 34 34 H 0.96991 * 120.00014 * 287.50141 * 10 8 7 35 35 H 1.07995 * 120.07249 * 359.95125 * 14 13 11 36 36 H 1.09001 * 109.47091 * 224.99586 * 16 15 14 37 37 H 0.96702 * 113.99743 * 59.99872 * 17 16 15 38 38 H 1.48499 * 110.00210 * 178.68234 * 18 16 15 39 39 H 1.48502 * 110.00092 * 300.00312 * 18 16 15 40 40 H 1.09005 * 109.47368 * 90.00165 * 20 19 15 41 41 H 1.09003 * 109.47375 * 210.00150 * 20 19 15 42 42 H 1.08995 * 109.47247 * 329.99816 * 20 19 15 43 43 H 1.08001 * 119.93175 * 179.97438 * 21 19 15 44 44 H 1.08998 * 109.47237 * 263.67105 * 23 22 21 45 45 H 1.09000 * 109.47190 * 23.67262 * 23 22 21 46 46 H 1.09002 * 109.47341 * 143.66938 * 23 22 21 47 47 H 1.09005 * 113.61071 * 270.81475 * 24 8 7 48 48 H 1.08994 * 113.61775 * 139.90993 * 24 8 7 49 49 H 1.08000 * 119.97340 * 180.02562 * 25 4 3 50 50 H 1.07997 * 119.93788 * 180.02562 * 26 25 4 51 51 H 1.07991 * 119.97495 * 180.27585 * 27 26 25 52 52 H 1.08001 * 120.02534 * 179.76563 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4312 1.2846 -0.0005 5 6 4.2537 0.0220 -0.0001 6 1 3.6550 -0.8733 -0.1681 7 6 5.5055 0.1018 -0.8899 8 6 6.2460 -0.6641 0.2214 9 1 7.2596 -0.3059 0.4008 10 7 6.1747 -2.1202 0.0758 11 6 7.2646 -2.8130 -0.3094 12 8 8.3069 -2.2300 -0.5355 13 6 7.1929 -4.2825 -0.4557 14 6 6.0403 -4.9695 -0.0723 15 6 5.9795 -6.3409 -0.2120 16 6 4.7359 -7.0845 0.2021 17 8 4.0056 -7.4768 -0.9619 18 14 3.6731 -5.9774 1.2582 19 6 7.0582 -7.0348 -0.7304 20 6 6.9846 -8.5324 -0.8806 21 6 8.2041 -6.3596 -1.1125 22 6 8.2756 -4.9882 -0.9836 23 6 9.5219 -4.2538 -1.4060 24 6 5.2078 -0.0914 1.2007 25 6 4.0561 2.5169 -0.0011 26 6 3.3021 3.6756 -0.0016 27 6 1.9210 3.6047 -0.0068 28 6 1.2915 2.3752 -0.0010 29 1 -0.3632 0.5139 0.8899 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3634 -1.0276 -0.0005 32 1 5.4154 -0.4572 -1.8213 33 1 5.8714 1.1177 -1.0385 34 1 5.3431 -2.5855 0.2567 35 1 5.1978 -4.4291 0.3333 36 1 5.0153 -7.9710 0.7715 37 1 4.4989 -8.0558 -1.5591 38 1 2.4286 -6.6882 1.6468 39 1 4.4212 -5.5625 2.4721 40 1 6.5849 -8.7797 -1.8641 41 1 7.9829 -8.9575 -0.7768 42 1 6.3329 -8.9433 -0.1097 43 1 9.0429 -6.9073 -1.5161 44 1 10.1576 -4.0869 -0.5365 45 1 10.0622 -4.8487 -2.1423 46 1 9.2473 -3.2945 -1.8448 47 1 5.4923 0.8716 1.6247 48 1 4.8778 -0.8061 1.9545 49 1 5.1346 2.5750 -0.0019 50 1 3.7926 4.6378 -0.0024 51 1 1.3342 4.5112 -0.0117 52 1 0.2129 2.3204 -0.0013 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15784314_9599494.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:10:41 Heat of formation + Delta-G solvation = -22.690969 kcal Electronic energy + Delta-G solvation = -33306.440542 eV Core-core repulsion = 29010.602165 eV Total energy + Delta-G solvation = -4295.838377 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.182 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -41.93893 -41.34928 -40.36185 -39.26679 -38.03042 -37.56172 -34.99639 -34.32895 -33.26185 -31.74941 -31.00510 -29.35295 -28.60312 -28.07473 -26.64240 -26.16275 -25.49972 -23.82310 -23.29449 -22.80490 -22.22420 -21.06342 -20.03354 -19.13065 -18.80062 -18.26764 -17.34754 -17.14013 -16.81014 -16.60937 -16.46417 -16.39677 -16.19949 -16.09030 -15.48131 -15.31507 -15.13365 -14.99387 -14.90966 -14.64522 -14.49999 -14.28163 -14.11335 -13.96621 -13.83330 -13.46902 -13.41210 -13.10260 -13.00170 -12.89309 -12.79368 -12.70952 -12.66888 -12.55377 -12.24234 -12.14979 -11.97162 -11.70127 -11.58721 -11.36379 -11.21552 -11.11080 -10.69460 -10.15984 -9.89812 -9.72669 -9.62217 -9.02670 -4.97956 -0.28181 0.15963 0.38554 0.52958 1.32691 1.56142 1.72869 1.90639 2.04393 2.43430 2.63130 2.80216 3.44923 3.50161 3.54227 3.63367 3.72034 3.75653 3.78559 3.82324 3.96730 4.04884 4.06853 4.11214 4.14957 4.23645 4.36415 4.37556 4.41949 4.48801 4.50516 4.52253 4.53848 4.65463 4.68827 4.70073 4.75039 4.79166 4.79473 4.83264 4.84994 4.91058 4.98281 5.05580 5.06766 5.08169 5.14420 5.19999 5.25668 5.41615 5.44993 5.48471 5.53265 5.63331 5.71350 5.78670 5.89764 6.45690 6.49196 6.59267 7.14272 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.327 6.327 3 C 0.113 3.887 4 C -0.115 4.115 5 C -0.060 4.060 6 H 0.103 0.897 7 C -0.140 4.140 8 C 0.118 3.882 9 H 0.094 0.906 10 N -0.700 5.700 11 C 0.559 3.441 12 O -0.560 6.560 13 C -0.157 4.157 14 C -0.066 4.066 15 C -0.137 4.137 16 C -0.081 4.081 17 O -0.544 6.544 18 Si 0.786 3.214 19 C -0.043 4.043 20 C -0.130 4.130 21 C -0.133 4.133 22 C -0.028 4.028 23 C -0.117 4.117 24 C -0.126 4.126 25 C -0.086 4.086 26 C -0.164 4.164 27 C -0.094 4.094 28 C -0.218 4.218 29 H 0.060 0.940 30 H 0.059 0.941 31 H 0.117 0.883 32 H 0.065 0.935 33 H 0.100 0.900 34 H 0.411 0.589 35 H 0.146 0.854 36 H 0.086 0.914 37 H 0.375 0.625 38 H -0.290 1.290 39 H -0.264 1.264 40 H 0.095 0.905 41 H 0.082 0.918 42 H 0.076 0.924 43 H 0.149 0.851 44 H 0.069 0.931 45 H 0.075 0.925 46 H 0.078 0.922 47 H 0.104 0.896 48 H 0.083 0.917 49 H 0.143 0.857 50 H 0.138 0.862 51 H 0.138 0.862 52 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.219 -0.953 -0.104 3.358 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.241 6.241 3 C 0.068 3.932 4 C -0.115 4.115 5 C -0.078 4.078 6 H 0.121 0.879 7 C -0.178 4.178 8 C 0.013 3.987 9 H 0.112 0.888 10 N -0.351 5.351 11 C 0.349 3.651 12 O -0.440 6.440 13 C -0.160 4.160 14 C -0.084 4.084 15 C -0.138 4.138 16 C -0.190 4.190 17 O -0.352 6.352 18 Si 0.688 3.312 19 C -0.043 4.043 20 C -0.186 4.186 21 C -0.150 4.150 22 C -0.029 4.029 23 C -0.174 4.174 24 C -0.164 4.164 25 C -0.104 4.104 26 C -0.182 4.182 27 C -0.112 4.112 28 C -0.236 4.236 29 H 0.079 0.921 30 H 0.077 0.923 31 H 0.136 0.864 32 H 0.084 0.916 33 H 0.119 0.881 34 H 0.248 0.752 35 H 0.163 0.837 36 H 0.103 0.897 37 H 0.225 0.775 38 H -0.217 1.217 39 H -0.190 1.190 40 H 0.114 0.886 41 H 0.101 0.899 42 H 0.095 0.905 43 H 0.167 0.833 44 H 0.088 0.912 45 H 0.093 0.907 46 H 0.096 0.904 47 H 0.122 0.878 48 H 0.102 0.898 49 H 0.161 0.839 50 H 0.156 0.844 51 H 0.156 0.844 52 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -3.251 -0.255 0.786 3.354 hybrid contribution 0.275 -1.274 -0.148 1.311 sum -2.976 -1.528 0.639 3.406 Atomic orbital electron populations 1.23282 0.76985 1.05417 1.01815 1.86020 1.22775 1.26672 1.88645 1.19100 0.92294 0.84739 0.97070 1.19241 0.90281 0.95966 1.06043 1.21375 0.93783 0.95579 0.97047 0.87902 1.23588 0.95285 1.01480 0.97483 1.21900 1.00162 0.79245 0.97409 0.88837 1.45557 1.13510 1.07451 1.68599 1.18404 0.83425 0.87118 0.76199 1.90730 1.30548 1.71630 1.51073 1.19703 0.96415 0.92526 1.07401 1.21164 0.96240 0.93840 0.97194 1.20143 0.96794 0.93849 1.03002 1.25484 0.96033 1.03472 0.93970 1.86757 1.42864 1.71106 1.34438 0.92378 0.76305 0.85965 0.76571 1.20261 0.92260 0.97565 0.94206 1.21075 1.04588 0.89123 1.03845 1.21191 0.98989 0.92865 1.01989 1.20248 0.94905 0.94102 0.93606 1.21014 0.93881 1.00793 1.01672 1.23407 0.94278 1.02527 0.96208 1.21095 1.00835 0.90893 0.97566 1.21348 0.94146 0.99220 1.03515 1.21246 0.95185 0.97576 0.97227 1.21485 1.00882 0.92467 1.08790 0.92108 0.92267 0.86437 0.91645 0.88140 0.75152 0.83731 0.89690 0.77514 1.21749 1.18957 0.88636 0.89871 0.90546 0.83336 0.91220 0.90657 0.90392 0.87752 0.89806 0.83924 0.84423 0.84367 0.84329 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 113.37 1.11 1.04 16 2 O -0.33 -0.75 9.42 -92.38 -0.87 -1.62 16 3 C 0.11 0.40 6.66 22.51 0.15 0.55 16 4 C -0.11 -0.25 5.30 -19.77 -0.10 -0.36 16 5 C -0.06 0.03 3.75 -11.01 -0.04 -0.01 16 6 H 0.10 -0.03 7.31 -2.38 -0.02 -0.05 16 7 C -0.14 0.00 7.27 31.18 0.23 0.23 16 8 C 0.12 0.07 4.33 45.57 0.20 0.26 16 9 H 0.09 0.34 7.46 -2.39 -0.02 0.33 16 10 N -0.70 -0.71 5.21 -442.62 -2.31 -3.02 16 11 C 0.56 3.69 7.70 86.79 0.67 4.36 16 12 O -0.56 -7.10 12.96 -3.88 -0.05 -7.15 16 13 C -0.16 -0.73 5.87 -20.09 -0.12 -0.85 16 14 C -0.07 -0.05 8.13 22.53 0.18 0.13 16 15 C -0.14 -0.03 5.26 -19.90 -0.10 -0.13 16 16 C -0.08 0.09 2.09 71.24 0.15 0.23 16 17 O -0.54 0.16 12.65 -148.98 -1.89 -1.73 16 18 Si 0.79 -0.73 30.16 68.60 2.07 1.34 16 19 C -0.04 0.03 5.87 -19.81 -0.12 -0.08 16 20 C -0.13 0.80 8.73 71.24 0.62 1.42 16 21 C -0.13 -0.11 9.31 22.23 0.21 0.10 16 22 C -0.03 -0.13 5.91 -19.61 -0.12 -0.24 16 23 C -0.12 -0.60 8.73 71.23 0.62 0.03 16 24 C -0.13 0.29 7.29 31.12 0.23 0.52 16 25 C -0.09 -0.05 8.54 22.25 0.19 0.14 16 26 C -0.16 -0.09 10.04 22.28 0.22 0.13 16 27 C -0.09 -0.08 10.04 22.26 0.22 0.14 16 28 C -0.22 -0.40 9.04 22.37 0.20 -0.20 16 29 H 0.06 -0.31 7.66 -2.39 -0.02 -0.33 16 30 H 0.06 -0.28 7.66 -2.39 -0.02 -0.30 16 31 H 0.12 -0.87 8.14 -2.39 -0.02 -0.89 16 32 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 33 H 0.10 -0.13 6.40 -2.39 -0.02 -0.15 16 34 H 0.41 -1.55 6.77 -92.71 -0.63 -2.18 16 35 H 0.15 -0.60 3.52 -2.91 -0.01 -0.61 16 36 H 0.09 -0.24 6.48 -2.39 -0.02 -0.26 16 37 H 0.38 -2.20 7.71 -74.06 -0.57 -2.77 16 38 H -0.29 -1.62 7.11 99.48 0.71 -0.91 16 39 H -0.26 -0.48 7.11 99.48 0.71 0.23 16 40 H 0.10 -0.85 7.77 -2.38 -0.02 -0.87 16 41 H 0.08 -0.59 8.08 -2.39 -0.02 -0.61 16 42 H 0.08 -0.51 6.21 -2.39 -0.01 -0.53 16 43 H 0.15 -0.47 8.06 -2.91 -0.02 -0.49 16 44 H 0.07 0.43 8.14 -2.39 -0.02 0.41 16 45 H 0.07 0.08 8.04 -2.39 -0.02 0.07 16 46 H 0.08 0.72 5.87 -2.39 -0.01 0.70 16 47 H 0.10 -0.34 7.64 -2.38 -0.02 -0.36 16 48 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 49 H 0.14 -0.43 6.73 -2.91 -0.02 -0.45 16 50 H 0.14 -0.42 8.06 -2.91 -0.02 -0.44 16 51 H 0.14 -0.41 8.06 -2.91 -0.02 -0.43 16 52 H 0.14 -0.23 6.30 -2.91 -0.02 -0.25 16 Total: 0.00 -17.48 408.65 1.37 -16.11 By element: Atomic # 1 Polarization: -11.13 SS G_CDS: -0.19 Total: -11.32 kcal Atomic # 6 Polarization: 2.79 SS G_CDS: 4.60 Total: 7.39 kcal Atomic # 7 Polarization: -0.71 SS G_CDS: -2.31 Total: -3.02 kcal Atomic # 8 Polarization: -7.70 SS G_CDS: -2.81 Total: -10.51 kcal Atomic # 14 Polarization: -0.73 SS G_CDS: 2.07 Total: 1.34 kcal Total: -17.48 1.37 -16.11 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_9599494.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.580 kcal (2) G-P(sol) polarization free energy of solvation -17.482 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.062 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.371 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.111 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.691 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds