Wall clock time and date at job start Sun Mar 7 2021 05:10:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35898 * 117.00482 * 2 1 4 4 C 1.38705 * 120.05617 * 179.97438 * 3 2 1 5 5 C 1.50693 * 120.03052 * 359.97438 * 4 3 2 6 6 H 1.09005 * 112.84964 * 348.53198 * 5 4 3 7 7 C 1.53784 * 113.61418 * 119.72033 * 5 4 3 8 8 C 1.53787 * 87.08067 * 140.06927 * 7 5 4 9 9 H 1.08998 * 113.61357 * 219.94050 * 8 7 5 10 10 N 1.46493 * 113.61479 * 89.11450 * 8 7 5 11 11 C 1.34784 * 119.99864 * 156.52932 * 10 8 7 12 12 O 1.21633 * 119.99699 * 359.72398 * 11 10 8 13 13 C 1.47255 * 119.99921 * 179.72827 * 11 10 8 14 14 C 1.36771 * 126.94215 * 179.71080 * 13 11 10 15 15 C 1.50704 * 125.79775 * 359.97438 * 14 13 11 16 16 N 1.34653 * 108.39813 * 179.87028 * 14 13 11 17 17 C 1.36443 * 110.30202 * 0.40905 * 16 14 13 18 18 C 1.50701 * 125.57913 * 179.73020 * 17 16 14 19 19 O 1.42902 * 109.47168 * 120.01994 * 18 17 16 20 20 Si 1.86301 * 109.46782 * 0.02562 * 18 17 16 21 21 C 1.34496 * 108.85178 * 359.74866 * 17 16 14 22 22 C 1.53782 * 87.16881 * 334.52708 * 8 7 5 23 23 C 1.38173 * 119.94269 * 179.72234 * 4 3 2 24 24 C 1.38245 * 120.05474 * 0.23539 * 23 4 3 25 25 C 1.38289 * 120.11139 * 0.02562 * 24 23 4 26 26 C 1.38122 * 120.05763 * 0.02968 * 25 24 23 27 27 H 1.09001 * 109.46658 * 60.00213 * 1 2 3 28 28 H 1.08999 * 109.47366 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.47117 * 300.00762 * 1 2 3 30 30 H 1.08997 * 113.61224 * 25.52467 * 7 5 4 31 31 H 1.09002 * 113.69111 * 254.62724 * 7 5 4 32 32 H 0.97000 * 120.00740 * 336.25625 * 10 8 7 33 33 H 1.09001 * 109.46882 * 90.00473 * 15 14 13 34 34 H 1.09004 * 109.46627 * 209.99956 * 15 14 13 35 35 H 1.08993 * 109.47342 * 329.99988 * 15 14 13 36 36 H 0.97008 * 124.84887 * 180.13444 * 16 14 13 37 37 H 1.08994 * 109.47296 * 240.02676 * 18 17 16 38 38 H 0.96702 * 114.00248 * 300.00475 * 19 18 17 39 39 H 1.48506 * 110.00233 * 58.67951 * 20 18 17 40 40 H 1.48500 * 109.99925 * 180.02562 * 20 18 17 41 41 H 1.07998 * 126.83394 * 179.97438 * 21 17 16 42 42 H 1.08999 * 113.61160 * 140.02818 * 22 8 7 43 43 H 1.09006 * 113.61519 * 270.92387 * 22 8 7 44 44 H 1.08002 * 119.97217 * 180.24995 * 23 4 3 45 45 H 1.08001 * 119.94526 * 179.97438 * 24 23 4 46 46 H 1.07998 * 119.97122 * 179.97438 * 25 24 23 47 47 H 1.07998 * 120.03275 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2108 0.0000 4 6 3.4312 1.2846 0.0005 5 6 4.2537 0.0220 0.0017 6 1 3.6598 -0.8699 0.2018 7 6 5.1758 -0.1137 -1.2215 8 6 6.2389 -0.6707 -0.2599 9 1 7.2478 -0.3169 -0.4721 10 7 6.1700 -2.1238 -0.0871 11 6 7.2612 -2.8075 0.3113 12 8 8.3043 -2.2186 0.5225 13 6 7.1903 -4.2673 0.4909 14 6 8.2044 -5.0976 0.8820 15 6 9.6132 -4.6745 1.2099 16 7 7.7295 -6.3568 0.9264 17 6 6.4150 -6.3801 0.5618 18 6 5.5477 -7.6102 0.4862 19 8 4.4408 -7.4683 1.3789 20 14 6.5478 -9.1057 0.9701 21 6 6.0197 -5.1258 0.2803 22 6 5.5320 0.1166 0.8561 23 6 4.0562 2.5169 -0.0053 24 6 3.3021 3.6757 -0.0067 25 6 1.9211 3.6047 -0.0018 26 6 1.2915 2.3753 0.0052 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3633 0.5139 0.8899 30 1 5.4500 0.8414 -1.6696 31 1 4.8266 -0.8406 -1.9548 32 1 5.3382 -2.5935 -0.2555 33 1 9.6838 -4.4383 2.2717 34 1 10.3009 -5.4860 0.9717 35 1 9.8738 -3.7935 0.6236 36 1 8.2490 -7.1366 1.1777 37 1 5.1796 -7.7334 -0.5323 38 1 4.6946 -7.3544 2.3051 39 1 7.0820 -8.9363 2.3454 40 1 5.7040 -10.3257 0.8992 41 1 5.0363 -4.8128 -0.0380 42 1 5.4692 -0.4250 1.7999 43 1 5.9034 1.1345 0.9749 44 1 5.1346 2.5750 -0.0089 45 1 3.7925 4.6379 -0.0108 46 1 1.3343 4.5113 -0.0025 47 1 0.2130 2.3203 0.0094 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15784314_9865296.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:10:50 Heat of formation + Delta-G solvation = -4.649916 kcal Electronic energy + Delta-G solvation = -29396.994246 eV Core-core repulsion = 25320.276037 eV Total energy + Delta-G solvation = -4076.718210 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -42.50173 -41.63671 -40.54150 -39.13940 -38.03634 -37.86368 -34.57246 -32.80811 -32.38375 -31.46147 -31.04514 -28.92788 -28.16325 -26.67033 -26.49378 -25.39767 -23.74515 -22.98945 -22.44380 -21.54554 -20.75185 -19.97288 -19.07223 -18.74975 -17.87667 -17.34499 -16.99350 -16.88231 -16.68640 -16.64474 -16.48849 -15.89191 -15.59779 -15.35072 -15.20314 -15.06200 -14.86715 -14.55084 -14.50027 -14.24269 -13.97035 -13.95107 -13.82050 -13.43304 -13.36486 -13.09843 -12.97420 -12.76712 -12.73905 -12.61404 -12.27043 -12.14830 -12.02190 -11.73420 -11.62939 -11.13003 -11.01327 -10.63641 -10.12134 -9.82475 -9.73894 -9.16023 -9.06865 -5.06421 0.35141 0.49205 0.69433 1.10544 1.29175 1.46366 1.81655 2.03443 2.38042 2.39593 2.51189 2.76929 3.32178 3.50401 3.65832 3.68913 3.75783 3.88128 3.92659 4.01324 4.09725 4.11987 4.20063 4.23865 4.32044 4.35694 4.46474 4.49630 4.51153 4.55001 4.67002 4.70706 4.72650 4.73318 4.77588 4.79960 4.88377 4.97222 5.02824 5.04823 5.11239 5.19277 5.29401 5.41620 5.53029 5.61006 5.67565 5.71687 5.85473 5.86587 6.39756 6.44723 6.45050 6.64715 7.34232 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.331 6.331 3 C 0.111 3.889 4 C -0.116 4.116 5 C -0.057 4.057 6 H 0.094 0.906 7 C -0.124 4.124 8 C 0.121 3.879 9 H 0.091 0.909 10 N -0.701 5.701 11 C 0.589 3.411 12 O -0.584 6.584 13 C -0.266 4.266 14 C 0.121 3.879 15 C -0.097 4.097 16 N -0.533 5.533 17 C -0.020 4.020 18 C -0.048 4.048 19 O -0.540 6.540 20 Si 0.758 3.242 21 C -0.139 4.139 22 C -0.141 4.141 23 C -0.086 4.086 24 C -0.162 4.162 25 C -0.093 4.093 26 C -0.217 4.217 27 H 0.062 0.938 28 H 0.114 0.886 29 H 0.060 0.940 30 H 0.105 0.895 31 H 0.079 0.921 32 H 0.409 0.591 33 H 0.081 0.919 34 H 0.094 0.906 35 H 0.082 0.918 36 H 0.427 0.573 37 H 0.139 0.861 38 H 0.387 0.613 39 H -0.275 1.275 40 H -0.294 1.294 41 H 0.154 0.846 42 H 0.059 0.941 43 H 0.101 0.899 44 H 0.144 0.856 45 H 0.141 0.859 46 H 0.141 0.859 47 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.893 -2.256 -1.457 2.830 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.245 6.245 3 C 0.066 3.934 4 C -0.117 4.117 5 C -0.075 4.075 6 H 0.112 0.888 7 C -0.161 4.161 8 C 0.015 3.985 9 H 0.109 0.891 10 N -0.351 5.351 11 C 0.380 3.620 12 O -0.466 6.466 13 C -0.276 4.276 14 C 0.001 3.999 15 C -0.154 4.154 16 N -0.134 5.134 17 C -0.129 4.129 18 C -0.158 4.158 19 O -0.348 6.348 20 Si 0.661 3.339 21 C -0.163 4.163 22 C -0.179 4.179 23 C -0.104 4.104 24 C -0.180 4.180 25 C -0.111 4.111 26 C -0.236 4.236 27 H 0.081 0.919 28 H 0.133 0.867 29 H 0.079 0.921 30 H 0.123 0.877 31 H 0.098 0.902 32 H 0.245 0.755 33 H 0.099 0.901 34 H 0.113 0.887 35 H 0.101 0.899 36 H 0.268 0.732 37 H 0.157 0.843 38 H 0.236 0.764 39 H -0.202 1.202 40 H -0.220 1.220 41 H 0.171 0.829 42 H 0.078 0.922 43 H 0.120 0.880 44 H 0.161 0.839 45 H 0.158 0.842 46 H 0.159 0.841 47 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -0.321 -2.909 -1.282 3.195 hybrid contribution -1.400 0.231 1.077 1.782 sum -1.721 -2.678 -0.205 3.190 Atomic orbital electron populations 1.23272 0.76958 1.05260 1.01945 1.86025 1.22854 1.26927 1.88727 1.19117 0.92311 0.84721 0.97290 1.19257 0.90310 0.96004 1.06118 1.21338 0.93673 0.95243 0.97256 0.88803 1.23365 0.94355 1.02430 0.95995 1.21786 0.99824 0.79887 0.96963 0.89090 1.45389 1.13524 1.07222 1.68948 1.17614 0.82888 0.86303 0.75177 1.90721 1.30972 1.71169 1.53710 1.20172 0.96079 0.92206 1.19107 1.20563 0.96562 0.83600 0.99213 1.20624 0.88301 1.03283 1.03181 1.41673 1.10021 1.08297 1.53375 1.20611 0.85138 0.97636 1.09480 1.24655 0.91652 1.00307 0.99182 1.86627 1.31939 1.94280 1.21923 0.94603 0.83013 0.73559 0.82693 1.21941 0.98033 0.91163 1.05159 1.23609 0.95369 1.01413 0.97522 1.21107 1.00889 0.90832 0.97539 1.21366 0.94132 0.99214 1.03314 1.21263 0.95195 0.97547 0.97113 1.21489 1.00877 0.92424 1.08764 0.91939 0.86738 0.92137 0.87714 0.90220 0.75480 0.90057 0.88706 0.89892 0.73158 0.84336 0.76367 1.20155 1.22049 0.82877 0.92172 0.88028 0.83860 0.84163 0.84124 0.84263 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 113.37 1.11 1.07 16 2 O -0.33 -1.59 9.43 -92.40 -0.87 -2.46 16 3 C 0.11 0.60 6.66 22.51 0.15 0.75 16 4 C -0.12 -0.50 5.30 -19.77 -0.10 -0.61 16 5 C -0.06 -0.14 3.75 -10.92 -0.04 -0.18 16 6 H 0.09 0.36 7.33 -2.38 -0.02 0.35 16 7 C -0.12 -0.04 7.29 31.12 0.23 0.19 16 8 C 0.12 0.41 4.30 45.52 0.20 0.60 16 9 H 0.09 0.58 7.50 -2.39 -0.02 0.56 16 10 N -0.70 -2.90 5.26 -443.45 -2.33 -5.24 16 11 C 0.59 5.37 7.81 86.61 0.68 6.05 16 12 O -0.58 -8.87 14.43 -4.13 -0.06 -8.93 16 13 C -0.27 -1.50 6.29 -19.04 -0.12 -1.62 16 14 C 0.12 0.29 7.17 41.78 0.30 0.59 16 15 C -0.10 -0.03 9.88 71.24 0.70 0.67 16 16 N -0.53 1.44 5.41 -171.06 -0.93 0.51 16 17 C -0.02 0.03 6.11 40.99 0.25 0.28 16 18 C -0.05 0.18 2.98 71.24 0.21 0.39 16 19 O -0.54 0.08 12.87 -148.98 -1.92 -1.84 16 20 Si 0.76 -4.38 30.94 68.60 2.12 -2.26 16 21 C -0.14 -0.26 10.43 23.62 0.25 -0.02 16 22 C -0.14 -0.39 7.27 31.21 0.23 -0.17 16 23 C -0.09 -0.18 8.61 22.26 0.19 0.01 16 24 C -0.16 -0.23 10.04 22.28 0.22 -0.01 16 25 C -0.09 -0.16 10.04 22.25 0.22 0.06 16 26 C -0.22 -0.67 9.04 22.37 0.20 -0.47 16 27 H 0.06 -0.22 7.67 -2.39 -0.02 -0.24 16 28 H 0.11 -0.60 8.14 -2.39 -0.02 -0.62 16 29 H 0.06 -0.19 7.65 -2.39 -0.02 -0.21 16 30 H 0.10 -0.12 7.72 -2.39 -0.02 -0.14 16 31 H 0.08 -0.02 8.14 -2.39 -0.02 -0.04 16 32 H 0.41 0.21 7.83 -92.71 -0.73 -0.51 16 33 H 0.08 0.01 8.14 -2.39 -0.02 -0.01 16 34 H 0.09 -0.53 8.14 -2.38 -0.02 -0.55 16 35 H 0.08 0.45 6.47 -2.39 -0.02 0.44 16 36 H 0.43 -3.60 6.70 -92.70 -0.62 -4.22 16 37 H 0.14 -0.77 7.96 -2.39 -0.02 -0.79 16 38 H 0.39 -1.99 8.70 -74.06 -0.64 -2.63 16 39 H -0.28 0.65 7.11 99.48 0.71 1.36 16 40 H -0.29 -0.70 7.11 99.48 0.71 0.00 16 41 H 0.15 -0.07 7.69 -2.91 -0.02 -0.09 16 42 H 0.06 0.33 8.14 -2.39 -0.02 0.32 16 43 H 0.10 0.09 6.33 -2.38 -0.02 0.08 16 44 H 0.14 -0.23 6.66 -2.91 -0.02 -0.25 16 45 H 0.14 -0.35 8.06 -2.91 -0.02 -0.38 16 46 H 0.14 -0.35 8.06 -2.91 -0.02 -0.37 16 47 H 0.14 -0.08 6.30 -2.91 -0.02 -0.10 16 Total: 0.00 -20.63 384.70 -0.03 -20.66 By element: Atomic # 1 Polarization: -7.13 SS G_CDS: -0.92 Total: -8.05 kcal Atomic # 6 Polarization: 2.72 SS G_CDS: 4.88 Total: 7.60 kcal Atomic # 7 Polarization: -1.47 SS G_CDS: -3.26 Total: -4.72 kcal Atomic # 8 Polarization: -10.38 SS G_CDS: -2.85 Total: -13.23 kcal Atomic # 14 Polarization: -4.38 SS G_CDS: 2.12 Total: -2.26 kcal Total: -20.63 -0.03 -20.66 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_9865296.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.012 kcal (2) G-P(sol) polarization free energy of solvation -20.634 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.622 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.028 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.661 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.650 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds