Wall clock time and date at job start Sun Mar 7 2021 08:55:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.47252 * 2 1 4 4 C 1.50700 * 109.47244 * 119.99822 * 2 1 3 5 5 C 1.35453 * 126.06924 * 244.97981 * 4 2 1 6 6 N 1.35530 * 108.87120 * 179.78459 * 5 4 2 7 7 C 1.37650 * 108.64426 * 0.37779 * 6 5 4 8 8 C 1.46680 * 126.23323 * 179.88937 * 7 6 5 9 9 O 1.21693 * 120.00097 * 179.68702 * 8 7 6 10 10 N 1.34777 * 119.99703 * 359.68376 * 8 7 6 11 11 C 1.46499 * 119.99665 * 179.72441 * 10 8 7 12 12 H 1.08998 * 112.85361 * 336.47110 * 11 10 8 13 13 C 1.53778 * 113.61557 * 107.77998 * 11 10 8 14 14 C 1.53785 * 87.08457 * 139.98112 * 13 11 10 15 15 H 1.09000 * 113.69324 * 89.12487 * 14 13 11 16 16 C 1.50698 * 113.61716 * 220.02618 * 14 13 11 17 17 C 1.38231 * 120.00102 * 37.21596 * 16 14 13 18 18 C 1.38235 * 119.99937 * 179.81668 * 17 16 14 19 19 C 1.38234 * 120.00031 * 0.39658 * 18 17 16 20 20 C 1.38242 * 120.00091 * 359.86061 * 19 18 17 21 21 C 1.38233 * 119.99696 * 217.49581 * 16 14 13 22 22 C 1.53786 * 113.61394 * 205.27970 * 11 10 8 23 23 C 1.37870 * 107.53222 * 359.62212 * 7 6 5 24 24 H 0.96704 * 113.99751 * 300.00319 * 1 2 3 25 25 H 1.08994 * 109.47072 * 239.99730 * 2 1 3 26 26 H 1.48506 * 109.99865 * 300.00076 * 3 2 1 27 27 H 1.48498 * 109.99743 * 61.31538 * 3 2 1 28 28 H 1.08005 * 125.56063 * 0.05066 * 5 4 2 29 29 H 0.97003 * 125.68028 * 180.26145 * 6 5 4 30 30 H 0.97001 * 120.00485 * 0.02562 * 10 8 7 31 31 H 1.08997 * 113.61721 * 254.52733 * 13 11 10 32 32 H 1.09004 * 113.61436 * 25.43627 * 13 11 10 33 33 H 1.08004 * 120.00451 * 0.02562 * 17 16 14 34 34 H 1.08003 * 120.00239 * 180.23316 * 18 17 16 35 35 H 1.07997 * 120.00350 * 179.83430 * 19 18 17 36 36 H 1.07990 * 120.00007 * 179.97438 * 20 19 18 37 37 H 1.08002 * 120.00097 * 359.97438 * 21 16 14 38 38 H 1.08999 * 113.61272 * 334.56869 * 22 11 10 39 39 H 1.08999 * 113.61438 * 105.38707 * 22 11 10 40 40 H 1.08001 * 126.45430 * 180.25781 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6338 -0.1499 2.2440 6 7 2.9015 -1.1019 3.1708 7 6 2.3691 -2.2963 2.7412 8 6 2.4367 -3.5798 3.4480 9 8 1.9188 -4.5690 2.9640 10 7 3.0725 -3.6635 4.6334 11 6 3.1348 -4.9441 5.3422 12 1 2.3318 -5.6244 5.0587 13 6 4.5293 -5.5920 5.3224 14 6 4.2785 -5.9910 6.7862 15 1 3.7893 -6.9585 6.8989 16 6 5.4909 -5.8419 7.6688 17 6 6.3575 -4.7818 7.4795 18 6 7.4676 -4.6430 8.2915 19 6 7.7154 -5.5689 9.2876 20 6 6.8517 -6.6321 9.4735 21 6 5.7395 -6.7686 8.6639 22 6 3.3104 -4.7985 6.8631 23 6 1.7554 -2.0652 1.5284 24 1 -0.3933 0.4418 0.7651 25 1 1.7923 -0.5138 -0.8899 26 1 1.5615 2.4679 -1.2085 27 1 1.5879 2.4585 1.2242 28 1 2.9284 0.8874 2.3057 29 1 3.3888 -0.9647 3.9982 30 1 3.4850 -2.8750 5.0194 31 1 4.6061 -6.4425 4.6451 32 1 5.3417 -4.8759 5.1981 33 1 6.1656 -4.0600 6.6993 34 1 8.1427 -3.8126 8.1461 35 1 8.5841 -5.4620 9.9203 36 1 7.0455 -7.3557 10.2513 37 1 5.0646 -7.5992 8.8091 38 1 3.7895 -3.8655 7.1599 39 1 2.4027 -5.0071 7.4294 40 1 1.2361 -2.7933 0.9229 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_10543058.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:55:20 Heat of formation + Delta-G solvation = 30.961425 kcal Electronic energy + Delta-G solvation = -22816.877726 eV Core-core repulsion = 19371.461170 eV Total energy + Delta-G solvation = -3445.416556 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.131 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.51696 -41.39528 -40.00404 -38.64224 -37.74331 -34.85415 -32.63143 -31.94366 -31.72752 -30.61912 -26.92435 -26.84737 -25.95847 -24.10277 -23.62092 -22.25823 -21.30607 -20.90183 -20.57843 -19.71985 -18.29076 -17.54777 -17.23221 -16.83191 -16.54443 -16.40077 -16.01199 -15.79926 -15.59824 -15.40175 -14.90556 -14.70689 -14.43937 -14.36655 -14.18928 -14.01076 -13.82123 -13.62694 -13.45234 -13.17852 -12.64164 -12.42558 -12.40110 -11.91566 -11.80999 -11.77706 -11.54763 -11.08769 -10.47671 -10.19553 -9.98539 -9.87996 -9.62218 -9.32915 -4.95866 0.35900 0.40286 0.44048 1.31934 1.52312 1.58807 1.90680 2.00546 2.04623 2.35376 2.76958 3.32555 3.51017 3.56007 3.60791 3.72472 3.81469 3.87443 3.93882 4.01603 4.03836 4.07734 4.18071 4.33090 4.46486 4.51715 4.54133 4.61264 4.68706 4.73778 4.83603 4.89354 4.91641 5.00335 5.04753 5.07058 5.12338 5.39528 5.51435 5.57684 5.58737 5.66129 5.78575 6.03843 6.18211 6.40121 6.54421 7.11525 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.040 4.040 3 Si 0.683 3.317 4 C -0.208 4.208 5 C 0.035 3.965 6 N -0.535 5.535 7 C -0.059 4.059 8 C 0.591 3.409 9 O -0.523 6.523 10 N -0.722 5.722 11 C 0.124 3.876 12 H 0.121 0.879 13 C -0.144 4.144 14 C -0.070 4.070 15 H 0.104 0.896 16 C -0.070 4.070 17 C -0.118 4.118 18 C -0.118 4.118 19 C -0.124 4.124 20 C -0.117 4.117 21 C -0.115 4.115 22 C -0.136 4.136 23 C -0.075 4.075 24 H 0.374 0.626 25 H 0.115 0.885 26 H -0.258 1.258 27 H -0.261 1.261 28 H 0.176 0.824 29 H 0.418 0.582 30 H 0.394 0.606 31 H 0.078 0.922 32 H 0.089 0.911 33 H 0.119 0.881 34 H 0.121 0.879 35 H 0.122 0.878 36 H 0.123 0.877 37 H 0.122 0.878 38 H 0.088 0.912 39 H 0.080 0.920 40 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.729 3.322 4.223 7.158 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.151 4.151 3 Si 0.585 3.415 4 C -0.215 4.215 5 C -0.102 4.102 6 N -0.131 5.131 7 C -0.171 4.171 8 C 0.379 3.621 9 O -0.398 6.398 10 N -0.373 5.373 11 C 0.019 3.981 12 H 0.139 0.861 13 C -0.183 4.183 14 C -0.089 4.089 15 H 0.122 0.878 16 C -0.070 4.070 17 C -0.136 4.136 18 C -0.136 4.136 19 C -0.142 4.142 20 C -0.135 4.135 21 C -0.133 4.133 22 C -0.174 4.174 23 C -0.101 4.101 24 H 0.221 0.779 25 H 0.133 0.867 26 H -0.183 1.183 27 H -0.186 1.186 28 H 0.192 0.808 29 H 0.255 0.745 30 H 0.228 0.772 31 H 0.097 0.903 32 H 0.107 0.893 33 H 0.137 0.863 34 H 0.140 0.860 35 H 0.140 0.860 36 H 0.141 0.859 37 H 0.140 0.860 38 H 0.106 0.894 39 H 0.099 0.901 40 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 4.288 3.085 3.462 6.316 hybrid contribution -0.502 0.331 1.245 1.382 sum 3.786 3.417 4.707 6.940 Atomic orbital electron populations 1.86614 1.18067 1.79852 1.49088 1.24334 0.83363 1.09986 0.97433 0.95393 0.91281 0.74497 0.80358 1.19839 1.07544 0.95118 0.99026 1.21897 1.02983 0.94738 0.90544 1.41921 1.44113 1.07810 1.19304 1.20433 1.10943 0.86060 0.99684 1.17090 0.77953 0.86670 0.80403 1.90878 1.46313 1.36209 1.66439 1.45864 1.57608 1.12284 1.21513 1.22584 0.98763 0.85541 0.91184 0.86149 1.23619 0.97477 1.01390 0.95818 1.21329 0.93926 0.99398 0.94265 0.87798 1.19631 0.95845 0.95209 0.96319 1.20966 0.94954 0.98060 0.99650 1.21165 0.97493 0.99243 0.95708 1.21208 0.99642 0.94981 0.98358 1.21205 0.94792 0.98112 0.99383 1.21098 0.97724 0.98988 0.95521 1.23462 0.99955 0.98756 0.95233 1.21238 0.99105 0.95685 0.94083 0.77878 0.86677 1.18311 1.18569 0.80755 0.74487 0.77237 0.90329 0.89276 0.86297 0.86049 0.86041 0.85942 0.85976 0.89396 0.90138 0.83179 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.00 12.88 -35.23 -0.45 -1.45 16 2 C -0.04 0.00 3.02 36.01 0.11 0.11 16 3 Si 0.68 -1.14 30.60 -169.99 -5.20 -6.35 16 4 C -0.21 -0.02 5.43 -105.02 -0.57 -0.59 16 5 C 0.04 -0.08 10.45 -16.91 -0.18 -0.25 16 6 N -0.54 1.40 5.99 -9.39 -0.06 1.34 16 7 C -0.06 -0.05 7.06 -81.98 -0.58 -0.63 16 8 C 0.59 1.29 7.79 -12.85 -0.10 1.19 16 9 O -0.52 -3.33 16.48 5.20 0.09 -3.24 16 10 N -0.72 0.93 5.35 -54.32 -0.29 0.64 16 11 C 0.12 -0.12 4.24 -67.12 -0.28 -0.41 16 12 H 0.12 0.09 7.46 -51.93 -0.39 -0.30 16 13 C -0.14 0.18 7.25 -25.92 -0.19 -0.01 16 14 C -0.07 0.11 3.98 -90.95 -0.36 -0.25 16 15 H 0.10 -0.20 8.09 -51.93 -0.42 -0.62 16 16 C -0.07 0.02 5.29 -104.63 -0.55 -0.53 16 17 C -0.12 0.07 8.62 -39.59 -0.34 -0.27 16 18 C -0.12 0.03 10.05 -39.58 -0.40 -0.37 16 19 C -0.12 -0.01 10.05 -39.58 -0.40 -0.40 16 20 C -0.12 -0.02 10.05 -39.58 -0.40 -0.41 16 21 C -0.12 -0.01 9.71 -39.58 -0.38 -0.39 16 22 C -0.14 0.32 7.30 -25.91 -0.19 0.13 16 23 C -0.07 -0.16 10.59 -39.12 -0.41 -0.58 16 24 H 0.37 -0.40 8.70 45.56 0.40 -0.01 16 25 H 0.12 -0.03 7.96 -51.93 -0.41 -0.45 16 26 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 27 H -0.26 0.06 7.11 56.52 0.40 0.46 16 28 H 0.18 -0.88 6.21 -52.48 -0.33 -1.20 16 29 H 0.42 -2.51 8.19 -40.82 -0.33 -2.84 16 30 H 0.39 -1.70 7.86 -40.82 -0.32 -2.02 16 31 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 32 H 0.09 -0.15 6.30 -51.93 -0.33 -0.48 16 33 H 0.12 -0.28 6.64 -52.48 -0.35 -0.62 16 34 H 0.12 -0.24 8.06 -52.48 -0.42 -0.66 16 35 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 36 H 0.12 -0.17 8.06 -52.49 -0.42 -0.59 16 37 H 0.12 -0.16 8.05 -52.49 -0.42 -0.58 16 38 H 0.09 -0.27 7.71 -51.93 -0.40 -0.67 16 39 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 40 H 0.15 0.48 8.06 -52.49 -0.42 0.06 16 LS Contribution 338.07 15.07 5.09 5.09 Total: 0.00 -8.88 338.07 -11.09 -19.97 By element: Atomic # 1 Polarization: -7.29 SS G_CDS: -5.04 Total: -12.33 kcal Atomic # 6 Polarization: 1.55 SS G_CDS: -5.23 Total: -3.68 kcal Atomic # 7 Polarization: 2.33 SS G_CDS: -0.35 Total: 1.98 kcal Atomic # 8 Polarization: -4.33 SS G_CDS: -0.37 Total: -4.70 kcal Atomic # 14 Polarization: -1.14 SS G_CDS: -5.20 Total: -6.35 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -8.88 -11.09 -19.97 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_10543058.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.933 kcal (2) G-P(sol) polarization free energy of solvation -8.884 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.049 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.088 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.971 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.961 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds