Wall clock time and date at job start Sun Mar 7 2021 08:55:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46509 * 1 3 3 C 1.35530 * 125.67441 * 2 1 4 4 C 1.35458 * 108.86962 * 179.97438 * 3 2 1 5 5 C 1.50698 * 126.06663 * 180.02562 * 4 3 2 6 6 O 1.42898 * 109.47262 * 119.96954 * 5 4 3 7 7 Si 1.86298 * 109.47283 * 359.96702 * 5 4 3 8 8 C 1.39831 * 107.86271 * 359.97438 * 4 3 2 9 9 C 1.37643 * 125.67667 * 179.69627 * 2 1 3 10 10 C 1.46684 * 126.23577 * 0.02562 * 9 2 1 11 11 O 1.21691 * 119.99643 * 5.47341 * 10 9 2 12 12 N 1.34774 * 119.99727 * 185.47692 * 10 9 2 13 13 C 1.46504 * 119.99448 * 185.20476 * 12 10 9 14 14 H 1.09002 * 112.85203 * 25.33186 * 13 12 10 15 15 C 1.53783 * 113.61049 * 156.52691 * 13 12 10 16 16 C 1.53785 * 87.07885 * 139.97841 * 15 13 12 17 17 H 1.09009 * 113.61399 * 89.20225 * 16 15 13 18 18 C 1.50702 * 113.61714 * 220.01442 * 16 15 13 19 19 C 1.38238 * 119.99613 * 59.72784 * 18 16 15 20 20 C 1.38231 * 119.99684 * 179.76303 * 19 18 16 21 21 C 1.38237 * 120.00395 * 0.49247 * 20 19 18 22 22 C 1.38236 * 119.99581 * 359.78464 * 21 20 19 23 23 C 1.38231 * 120.00183 * 240.00033 * 18 16 15 24 24 C 1.53780 * 113.61600 * 254.13262 * 13 12 10 25 25 H 1.08998 * 109.47246 * 85.97591 * 1 2 3 26 26 H 1.09002 * 109.46922 * 325.97518 * 1 2 3 27 27 H 1.09004 * 109.46984 * 205.97674 * 1 2 3 28 28 H 1.07998 * 125.56967 * 359.97438 * 3 2 1 29 29 H 1.09003 * 109.46689 * 239.96977 * 5 4 3 30 30 H 0.96703 * 114.00195 * 179.97438 * 6 5 4 31 31 H 1.48505 * 109.99928 * 60.00426 * 7 5 4 32 32 H 1.48499 * 109.99883 * 181.31980 * 7 5 4 33 33 H 1.07999 * 126.45842 * 180.02562 * 8 4 3 34 34 H 0.96998 * 120.00473 * 5.20198 * 12 10 9 35 35 H 1.08994 * 113.61537 * 254.52435 * 15 13 12 36 36 H 1.08999 * 113.61941 * 25.34891 * 15 13 12 37 37 H 1.07994 * 119.99759 * 0.02562 * 19 18 16 38 38 H 1.07998 * 119.99778 * 180.24868 * 20 19 18 39 39 H 1.07991 * 120.00104 * 179.76308 * 21 20 19 40 40 H 1.07994 * 119.99832 * 179.97438 * 22 21 20 41 41 H 1.08001 * 120.00061 * 0.02562 * 23 18 16 42 42 H 1.09008 * 113.60924 * 334.57325 * 24 13 12 43 43 H 1.09002 * 113.61736 * 105.46719 * 24 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2555 1.1010 0.0000 4 6 3.5522 0.7093 0.0006 5 6 4.7537 1.6190 0.0013 6 8 5.5391 1.3697 1.1688 7 14 4.1887 3.3942 0.0003 8 6 3.5780 -0.6887 0.0015 9 6 2.2678 -1.1181 0.0059 10 6 1.8124 -2.5124 0.0128 11 8 0.6263 -2.7655 -0.0869 12 7 2.7077 -3.5131 0.1296 13 6 2.2671 -4.9062 0.0221 14 1 1.3538 -5.0175 -0.5625 15 6 3.3862 -5.8758 -0.3931 16 6 2.7959 -6.8679 0.6230 17 1 2.0277 -7.5175 0.2033 18 6 3.8392 -7.6245 1.4041 19 6 4.7501 -6.9384 2.1854 20 6 5.7040 -7.6327 2.9057 21 6 5.7534 -9.0124 2.8369 22 6 4.8461 -9.6981 2.0512 23 6 3.8888 -9.0042 1.3350 24 6 2.2300 -5.6463 1.3696 25 1 -0.3634 0.0721 -1.0251 26 1 -0.3633 0.8517 0.5750 27 1 -0.3633 -0.9239 0.4501 28 1 1.9082 2.1236 -0.0004 29 1 5.3542 1.4283 -0.8882 30 1 6.3309 1.9209 1.2352 31 1 3.3688 3.6669 1.2081 32 1 5.3640 4.3013 -0.0311 33 1 4.4583 -1.3144 0.0026 34 1 3.6436 -3.3110 0.2847 35 1 3.3107 -6.2128 -1.4268 36 1 4.3855 -5.5261 -0.1339 37 1 4.7139 -5.8602 2.2362 38 1 6.4131 -7.0969 3.5193 39 1 6.5011 -9.5545 3.3967 40 1 4.8849 -10.7760 1.9971 41 1 3.1801 -9.5399 0.7208 42 1 2.9126 -5.2342 2.1129 43 1 1.2225 -5.7981 1.7568 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_10803934.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:55:23 Heat of formation + Delta-G solvation = 37.903503 kcal Electronic energy + Delta-G solvation = -25016.510017 eV Core-core repulsion = 21415.856873 eV Total energy + Delta-G solvation = -3600.653144 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.146 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.49239 -41.31240 -39.91750 -38.56538 -37.75474 -34.95168 -33.81170 -31.97228 -31.73972 -30.65468 -28.37016 -26.76823 -26.27948 -25.52251 -23.85989 -23.50896 -22.14023 -21.08999 -20.74431 -19.97958 -18.59728 -18.34883 -18.15984 -17.16598 -16.80213 -16.62035 -16.42562 -15.93166 -15.70390 -15.51366 -15.30321 -15.02202 -14.86028 -14.41599 -14.29762 -14.16383 -14.00600 -13.91875 -13.57452 -13.53216 -13.25547 -13.16533 -13.03462 -12.56840 -12.46716 -12.32823 -11.87929 -11.82465 -11.69677 -11.46671 -10.91479 -10.38387 -10.07596 -9.80685 -9.61608 -9.54891 -9.18975 -4.95502 0.43359 0.50372 0.51456 1.30619 1.56992 1.59049 1.67700 1.99583 2.36313 2.40250 2.84170 3.40840 3.46561 3.63713 3.69771 3.75563 3.89024 3.90955 3.96501 4.01962 4.10871 4.13200 4.15859 4.25203 4.30879 4.41383 4.52617 4.58726 4.60403 4.65221 4.67821 4.69890 4.76667 4.82354 4.92736 4.98254 5.08641 5.14980 5.19821 5.24795 5.50893 5.58833 5.64988 5.71026 5.74533 5.96077 6.11103 6.16763 6.50350 6.53960 7.21438 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.404 5.404 3 C 0.029 3.971 4 C -0.162 4.162 5 C -0.038 4.038 6 O -0.537 6.537 7 Si 0.676 3.324 8 C -0.111 4.111 9 C -0.055 4.055 10 C 0.593 3.407 11 O -0.547 6.547 12 N -0.709 5.709 13 C 0.127 3.873 14 H 0.117 0.883 15 C -0.135 4.135 16 C -0.071 4.071 17 H 0.103 0.897 18 C -0.070 4.070 19 C -0.117 4.117 20 C -0.118 4.118 21 C -0.124 4.124 22 C -0.118 4.118 23 C -0.116 4.116 24 C -0.145 4.145 25 H 0.081 0.919 26 H 0.084 0.916 27 H 0.106 0.894 28 H 0.174 0.826 29 H 0.072 0.928 30 H 0.377 0.623 31 H -0.255 1.255 32 H -0.262 1.262 33 H 0.144 0.856 34 H 0.404 0.596 35 H 0.080 0.920 36 H 0.090 0.910 37 H 0.121 0.879 38 H 0.122 0.878 39 H 0.121 0.879 40 H 0.122 0.878 41 H 0.122 0.878 42 H 0.090 0.910 43 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.447 0.986 -2.276 2.871 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.076 5.076 3 C -0.107 4.107 4 C -0.168 4.168 5 C -0.148 4.148 6 O -0.344 6.344 7 Si 0.577 3.423 8 C -0.138 4.138 9 C -0.168 4.168 10 C 0.381 3.619 11 O -0.426 6.426 12 N -0.359 5.359 13 C 0.022 3.978 14 H 0.135 0.865 15 C -0.173 4.173 16 C -0.089 4.089 17 H 0.121 0.879 18 C -0.070 4.070 19 C -0.135 4.135 20 C -0.136 4.136 21 C -0.142 4.142 22 C -0.136 4.136 23 C -0.134 4.134 24 C -0.183 4.183 25 H 0.099 0.901 26 H 0.103 0.897 27 H 0.124 0.876 28 H 0.191 0.809 29 H 0.090 0.910 30 H 0.224 0.776 31 H -0.179 1.179 32 H -0.187 1.187 33 H 0.162 0.838 34 H 0.239 0.761 35 H 0.099 0.901 36 H 0.109 0.891 37 H 0.139 0.861 38 H 0.140 0.860 39 H 0.139 0.861 40 H 0.140 0.860 41 H 0.140 0.860 42 H 0.108 0.892 43 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -0.295 1.106 -1.848 2.174 hybrid contribution 1.608 -0.061 0.743 1.773 sum 1.313 1.045 -1.105 2.009 Atomic orbital electron populations 1.22376 0.75453 1.05768 1.04202 1.43769 1.07020 1.04634 1.52156 1.21756 0.89931 0.91717 1.07318 1.18587 0.92096 0.93869 1.12297 1.24001 0.92793 1.08358 0.89654 1.86602 1.40053 1.63987 1.43723 0.95418 0.84295 0.74302 0.88238 1.21155 0.94282 0.94593 1.03746 1.20015 0.90234 0.87638 1.18948 1.16993 0.85579 0.83529 0.75761 1.90791 1.16152 1.84790 1.50847 1.45635 1.11374 1.05419 1.73507 1.22556 0.99085 0.78386 0.97773 0.86474 1.23455 0.98627 0.95216 1.00001 1.21358 0.96533 0.94798 0.96249 0.87896 1.19634 0.96321 0.93558 0.97480 1.21000 0.95400 0.99842 0.97293 1.21173 0.98606 0.94488 0.99312 1.21200 0.99210 0.94537 0.99282 1.21190 0.95394 1.00038 0.96960 1.21084 0.98956 0.93645 0.99701 1.23651 1.02417 0.95004 0.97254 0.90072 0.89724 0.87592 0.80930 0.90970 0.77578 1.17944 1.18698 0.83813 0.76061 0.90121 0.89147 0.86139 0.86036 0.86086 0.86002 0.86027 0.89190 0.90474 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.01 10.65 59.85 0.64 0.63 16 2 N -0.40 -0.72 3.16 -120.23 -0.38 -1.10 16 3 C 0.03 0.02 9.94 -16.91 -0.17 -0.15 16 4 C -0.16 -0.25 5.47 -105.02 -0.57 -0.82 16 5 C -0.04 0.00 3.01 36.00 0.11 0.11 16 6 O -0.54 -0.68 12.86 -35.23 -0.45 -1.14 16 7 Si 0.68 -0.73 30.59 -169.99 -5.20 -5.93 16 8 C -0.11 -0.19 10.28 -39.12 -0.40 -0.59 16 9 C -0.06 -0.14 6.88 -81.98 -0.56 -0.71 16 10 C 0.59 1.76 7.77 -12.85 -0.10 1.66 16 11 O -0.55 -3.07 14.31 5.20 0.07 -3.00 16 12 N -0.71 -0.11 5.33 -54.32 -0.29 -0.40 16 13 C 0.13 -0.04 4.18 -67.12 -0.28 -0.32 16 14 H 0.12 0.11 7.57 -51.93 -0.39 -0.28 16 15 C -0.13 0.22 7.29 -25.92 -0.19 0.03 16 16 C -0.07 0.06 3.98 -90.87 -0.36 -0.30 16 17 H 0.10 -0.15 8.09 -51.92 -0.42 -0.57 16 18 C -0.07 -0.03 5.29 -104.62 -0.55 -0.59 16 19 C -0.12 -0.06 8.60 -39.58 -0.34 -0.40 16 20 C -0.12 -0.08 10.05 -39.58 -0.40 -0.48 16 21 C -0.12 -0.10 10.05 -39.58 -0.40 -0.49 16 22 C -0.12 -0.09 10.05 -39.58 -0.40 -0.49 16 23 C -0.12 -0.08 9.71 -39.58 -0.38 -0.46 16 24 C -0.14 0.05 7.27 -25.83 -0.19 -0.14 16 25 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 26 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 27 H 0.11 0.16 6.20 -51.93 -0.32 -0.16 16 28 H 0.17 -0.36 6.19 -52.49 -0.32 -0.69 16 29 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 30 H 0.38 -1.01 8.74 45.56 0.40 -0.61 16 31 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 32 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 33 H 0.14 -0.03 7.49 -52.49 -0.39 -0.42 16 34 H 0.40 -0.74 7.66 -40.82 -0.31 -1.05 16 35 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 36 H 0.09 -0.18 7.69 -51.93 -0.40 -0.58 16 37 H 0.12 -0.11 6.68 -52.49 -0.35 -0.46 16 38 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 39 H 0.12 -0.09 8.06 -52.49 -0.42 -0.52 16 40 H 0.12 -0.10 8.06 -52.49 -0.42 -0.53 16 41 H 0.12 -0.10 8.05 -52.49 -0.42 -0.52 16 42 H 0.09 -0.03 6.34 -51.92 -0.33 -0.36 16 43 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 LS Contribution 356.34 15.07 5.37 5.37 Total: 0.00 -8.32 356.34 -11.27 -19.59 By element: Atomic # 1 Polarization: -4.06 SS G_CDS: -5.84 Total: -9.90 kcal Atomic # 6 Polarization: 1.06 SS G_CDS: -4.55 Total: -3.50 kcal Atomic # 7 Polarization: -0.83 SS G_CDS: -0.67 Total: -1.50 kcal Atomic # 8 Polarization: -3.76 SS G_CDS: -0.38 Total: -4.14 kcal Atomic # 14 Polarization: -0.73 SS G_CDS: -5.20 Total: -5.93 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -8.32 -11.27 -19.59 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_10803934.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.498 kcal (2) G-P(sol) polarization free energy of solvation -8.323 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.175 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.271 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.594 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.904 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds