Wall clock time and date at job start Sun Mar 7 2021 08:55:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.37652 * 125.67840 * 2 1 4 4 C 1.46676 * 126.23506 * 0.02562 * 3 2 1 5 5 O 1.21698 * 119.99868 * 4.58353 * 4 3 2 6 6 N 1.34781 * 120.00400 * 184.30711 * 4 3 2 7 7 C 1.46495 * 119.99899 * 175.00604 * 6 4 3 8 8 H 1.08993 * 112.85296 * 334.66814 * 7 6 4 9 9 C 1.53789 * 113.61509 * 105.86406 * 7 6 4 10 10 C 1.53949 * 87.02076 * 139.94977 * 9 7 6 11 11 H 1.08998 * 113.54246 * 89.18863 * 10 9 7 12 12 C 1.50703 * 113.74280 * 220.05967 * 10 9 7 13 13 C 1.38228 * 120.00096 * 37.32133 * 12 10 9 14 14 C 1.38241 * 120.00217 * 179.76864 * 13 12 10 15 15 C 1.38239 * 119.99466 * 0.48458 * 14 13 12 16 16 C 1.38234 * 119.99932 * 359.79435 * 15 14 13 17 17 C 1.38227 * 120.00343 * 359.94797 * 16 15 14 18 18 C 1.53781 * 113.61215 * 203.46893 * 7 6 4 19 19 C 1.37875 * 107.53730 * 179.74284 * 3 2 1 20 20 C 1.39836 * 107.07966 * 0.26297 * 19 3 2 21 21 C 1.35451 * 107.86800 * 359.97438 * 20 19 3 22 22 C 1.50703 * 125.56429 * 180.02562 * 21 20 19 23 23 O 1.42902 * 109.47038 * 209.98130 * 22 21 20 24 24 Si 1.86304 * 109.47216 * 329.97946 * 22 21 20 25 25 H 1.08995 * 109.47188 * 94.01131 * 1 2 3 26 26 H 1.08999 * 109.47148 * 214.01131 * 1 2 3 27 27 H 1.09007 * 109.47086 * 334.00901 * 1 2 3 28 28 H 0.96994 * 119.99613 * 355.00059 * 6 4 3 29 29 H 1.09000 * 113.61289 * 254.53287 * 9 7 6 30 30 H 1.08995 * 113.61108 * 25.42960 * 9 7 6 31 31 H 1.08002 * 120.00252 * 0.02562 * 13 12 10 32 32 H 1.07996 * 120.00124 * 180.25139 * 14 13 12 33 33 H 1.08003 * 119.99616 * 179.76690 * 15 14 13 34 34 H 1.08001 * 119.99503 * 179.97438 * 16 15 14 35 35 H 1.08001 * 120.00485 * 180.02562 * 17 16 15 36 36 H 1.09000 * 113.61321 * 334.56656 * 18 7 6 37 37 H 1.08997 * 113.61498 * 105.47634 * 18 7 6 38 38 H 1.07992 * 126.46009 * 180.26336 * 19 3 2 39 39 H 1.08002 * 126.06648 * 179.97438 * 20 19 3 40 40 H 1.09000 * 109.46917 * 89.97964 * 22 21 20 41 41 H 0.96693 * 114.00297 * 60.00008 * 23 22 21 42 42 H 1.48495 * 109.99738 * 180.02562 * 24 22 21 43 43 H 1.48497 * 109.99808 * 301.31729 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1182 0.0000 4 6 1.8124 2.5124 0.0005 5 8 0.6249 2.7647 0.0852 6 7 2.7095 3.5145 -0.0872 7 6 2.2503 4.9012 -0.1970 8 1 1.2526 4.9839 -0.6280 9 6 2.4321 5.7146 1.0955 10 6 2.8609 6.8909 0.1997 11 1 2.0299 7.5185 -0.1220 12 6 4.0147 7.6864 0.7539 13 6 5.0411 7.0432 1.4198 14 6 6.1019 7.7724 1.9239 15 6 6.1311 9.1459 1.7708 16 6 5.1018 9.7897 1.1098 17 6 4.0438 9.0600 0.6011 18 6 3.2807 5.8420 -0.8436 19 6 3.5780 0.6889 0.0059 20 6 3.5521 -0.7093 0.0033 21 6 2.2555 -1.1009 -0.0034 22 6 1.7709 -2.5279 -0.0076 23 8 0.5159 -2.6028 -0.6869 24 14 3.0154 -3.6038 -0.8818 25 1 -0.3633 -0.0719 -1.0251 26 1 -0.3633 -0.8519 0.5748 27 1 -0.3633 0.9238 0.4504 28 1 3.6592 3.3174 -0.0776 29 1 1.5015 5.8916 1.6346 30 1 3.2299 5.3413 1.7376 31 1 5.0164 5.9705 1.5427 32 1 6.9058 7.2694 2.4407 33 1 6.9580 9.7160 2.1679 34 1 5.1245 10.8629 0.9905 35 1 3.2398 9.5630 0.0843 36 1 4.3109 5.5037 -0.7326 37 1 3.0340 6.1219 -1.8678 38 1 4.4583 1.3144 0.0115 39 1 4.4132 -1.3611 0.0062 40 1 1.6495 -2.8734 1.0191 41 1 0.5491 -2.3100 -1.6078 42 1 2.5489 -5.0135 -0.8933 43 1 3.2135 -3.1236 -2.2730 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:55:25 Heat of formation + Delta-G solvation = 34.453711 kcal Electronic energy + Delta-G solvation = -25093.485914 eV Core-core repulsion = 21492.683176 eV Total energy + Delta-G solvation = -3600.802738 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.146 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.57996 -41.34906 -39.97335 -38.60881 -37.87545 -34.95987 -33.64910 -32.02462 -31.77905 -31.07883 -27.51883 -27.21305 -26.79007 -25.59732 -23.64326 -23.30960 -22.28121 -21.34004 -20.80453 -20.10595 -18.84326 -18.24848 -18.08222 -17.10329 -16.94604 -16.48162 -16.33781 -15.97776 -15.83339 -15.47821 -15.32427 -15.07013 -14.78062 -14.43845 -14.33347 -14.26616 -14.16510 -13.98367 -13.78902 -13.55534 -13.28443 -13.09269 -12.91813 -12.58665 -12.39773 -12.34501 -11.96263 -11.85043 -11.71250 -11.49047 -11.10880 -10.76374 -10.10389 -9.82389 -9.73552 -9.56618 -9.08188 -4.99217 0.40380 0.43821 0.49639 1.09987 1.55041 1.66638 1.71836 1.96845 2.38574 2.39917 2.82461 3.10595 3.38621 3.53942 3.61509 3.67692 3.74932 3.87139 3.99533 3.99934 4.09442 4.13021 4.23454 4.31851 4.35618 4.43519 4.49906 4.51319 4.57440 4.62525 4.66608 4.73987 4.79483 4.90617 4.96399 4.99705 5.06683 5.12274 5.14211 5.20421 5.48693 5.57083 5.63392 5.69676 5.73037 5.98485 6.09396 6.13506 6.22640 6.48356 7.19279 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.392 5.392 3 C -0.054 4.054 4 C 0.591 3.409 5 O -0.546 6.546 6 N -0.709 5.709 7 C 0.126 3.874 8 H 0.117 0.883 9 C -0.144 4.144 10 C -0.071 4.071 11 H 0.102 0.898 12 C -0.070 4.070 13 C -0.117 4.117 14 C -0.118 4.118 15 C -0.124 4.124 16 C -0.118 4.118 17 C -0.116 4.116 18 C -0.135 4.135 19 C -0.135 4.135 20 C -0.198 4.198 21 C 0.013 3.987 22 C -0.057 4.057 23 O -0.533 6.533 24 Si 0.718 3.282 25 H 0.073 0.927 26 H 0.091 0.909 27 H 0.104 0.896 28 H 0.404 0.596 29 H 0.076 0.924 30 H 0.090 0.910 31 H 0.121 0.879 32 H 0.122 0.878 33 H 0.121 0.879 34 H 0.122 0.878 35 H 0.122 0.878 36 H 0.090 0.910 37 H 0.080 0.920 38 H 0.147 0.853 39 H 0.154 0.846 40 H 0.124 0.876 41 H 0.377 0.623 42 H -0.255 1.255 43 H -0.257 1.257 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.623 0.183 -0.072 4.627 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.065 5.065 3 C -0.168 4.168 4 C 0.380 3.620 5 O -0.425 6.425 6 N -0.359 5.359 7 C 0.022 3.978 8 H 0.134 0.866 9 C -0.183 4.183 10 C -0.090 4.090 11 H 0.121 0.879 12 C -0.070 4.070 13 C -0.135 4.135 14 C -0.136 4.136 15 C -0.142 4.142 16 C -0.136 4.136 17 C -0.134 4.134 18 C -0.173 4.173 19 C -0.161 4.161 20 C -0.222 4.222 21 C -0.105 4.105 22 C -0.166 4.166 23 O -0.339 6.339 24 Si 0.617 3.383 25 H 0.091 0.909 26 H 0.110 0.890 27 H 0.122 0.878 28 H 0.239 0.761 29 H 0.095 0.905 30 H 0.109 0.891 31 H 0.139 0.861 32 H 0.140 0.860 33 H 0.139 0.861 34 H 0.140 0.860 35 H 0.140 0.860 36 H 0.109 0.891 37 H 0.098 0.902 38 H 0.164 0.836 39 H 0.171 0.829 40 H 0.141 0.859 41 H 0.225 0.775 42 H -0.180 1.180 43 H -0.182 1.182 Dipole moment (debyes) X Y Z Total from point charges 3.281 -0.375 -0.132 3.305 hybrid contribution -0.407 0.539 -0.579 0.889 sum 2.875 0.164 -0.711 2.966 Atomic orbital electron populations 1.22392 0.75579 1.05844 1.03888 1.43758 1.06994 1.04114 1.51628 1.20053 0.90544 0.87480 1.18682 1.17030 0.85626 0.83576 0.75766 1.90789 1.16380 1.84819 1.50536 1.45615 1.09650 1.05790 1.74856 1.22553 0.99628 0.78434 0.97210 0.86563 1.23649 1.02659 0.94949 0.97038 1.21356 0.96317 0.94487 0.96797 0.87936 1.19628 0.95536 0.93638 0.98195 1.20995 0.94068 0.99867 0.98608 1.21175 0.98317 0.94323 0.99755 1.21205 0.98831 0.94801 0.99378 1.21190 0.94275 1.00032 0.98071 1.21085 0.98684 0.93493 1.00125 1.23455 0.99576 0.94970 0.99266 1.21291 0.94330 0.95242 1.05282 1.20548 0.94932 0.95217 1.11489 1.21132 0.91100 0.89124 1.09124 1.24927 0.93489 0.94490 1.03658 1.86594 1.29813 1.88530 1.28977 0.94423 0.84711 0.77372 0.81816 0.90860 0.89008 0.87776 0.76088 0.90476 0.89142 0.86124 0.86005 0.86074 0.86005 0.86047 0.89113 0.90161 0.83580 0.82903 0.85886 0.77504 1.17959 1.18164 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.10 9.38 59.84 0.56 0.66 16 2 N -0.39 -0.85 3.16 -115.62 -0.37 -1.22 16 3 C -0.05 -0.12 6.89 -81.98 -0.56 -0.68 16 4 C 0.59 1.65 7.77 -12.85 -0.10 1.55 16 5 O -0.55 -3.21 14.23 5.19 0.07 -3.13 16 6 N -0.71 0.25 5.35 -54.32 -0.29 -0.04 16 7 C 0.13 -0.07 4.18 -67.12 -0.28 -0.35 16 8 H 0.12 0.11 7.57 -51.93 -0.39 -0.29 16 9 C -0.14 0.10 7.27 -25.83 -0.19 -0.09 16 10 C -0.07 0.08 3.97 -90.87 -0.36 -0.28 16 11 H 0.10 -0.17 8.09 -51.93 -0.42 -0.59 16 12 C -0.07 -0.01 5.29 -104.62 -0.55 -0.56 16 13 C -0.12 0.01 8.63 -39.58 -0.34 -0.34 16 14 C -0.12 -0.02 10.05 -39.58 -0.40 -0.42 16 15 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 16 C -0.12 -0.05 10.05 -39.59 -0.40 -0.45 16 17 C -0.12 -0.05 9.71 -39.58 -0.38 -0.43 16 18 C -0.13 0.26 7.30 -25.91 -0.19 0.07 16 19 C -0.14 0.00 10.36 -39.12 -0.41 -0.41 16 20 C -0.20 0.06 9.37 -39.98 -0.37 -0.31 16 21 C 0.01 0.01 6.14 -81.95 -0.50 -0.49 16 22 C -0.06 0.04 2.90 36.01 0.10 0.14 16 23 O -0.53 -0.17 10.50 -35.23 -0.37 -0.54 16 24 Si 0.72 -1.25 31.10 -169.99 -5.29 -6.53 16 25 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 26 H 0.09 0.09 7.09 -51.93 -0.37 -0.28 16 27 H 0.10 0.32 6.01 -51.93 -0.31 0.01 16 28 H 0.40 -1.12 7.61 -40.82 -0.31 -1.43 16 29 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 30 H 0.09 -0.09 6.32 -51.93 -0.33 -0.42 16 31 H 0.12 -0.20 6.66 -52.49 -0.35 -0.55 16 32 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 33 H 0.12 -0.14 8.06 -52.48 -0.42 -0.56 16 34 H 0.12 -0.13 8.06 -52.49 -0.42 -0.56 16 35 H 0.12 -0.12 8.05 -52.49 -0.42 -0.54 16 36 H 0.09 -0.23 7.70 -51.93 -0.40 -0.63 16 37 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 38 H 0.15 -0.42 7.45 -52.49 -0.39 -0.81 16 39 H 0.15 -0.49 6.85 -52.49 -0.36 -0.85 16 40 H 0.12 -0.18 7.96 -51.93 -0.41 -0.59 16 41 H 0.38 -0.71 8.70 45.56 0.40 -0.31 16 42 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 43 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 LS Contribution 352.51 15.07 5.31 5.31 Total: 0.00 -7.62 352.51 -11.51 -19.12 By element: Atomic # 1 Polarization: -4.32 SS G_CDS: -5.81 Total: -10.13 kcal Atomic # 6 Polarization: 1.93 SS G_CDS: -4.77 Total: -2.84 kcal Atomic # 7 Polarization: -0.61 SS G_CDS: -0.66 Total: -1.26 kcal Atomic # 8 Polarization: -3.38 SS G_CDS: -0.30 Total: -3.67 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.29 Total: -6.53 kcal Total LS contribution 5.31 Total: 5.31 kcal Total: -7.62 -11.51 -19.12 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.579 kcal (2) G-P(sol) polarization free energy of solvation -7.619 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.960 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.506 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.125 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.454 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds