Wall clock time and date at job start Sun Mar 7 2021 08:55:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50699 * 109.47188 * 120.00199 * 2 1 3 5 5 C 1.36453 * 120.29482 * 120.00110 * 4 2 1 6 6 C 1.40098 * 119.25286 * 179.97438 * 5 4 2 7 7 C 1.40849 * 132.86506 * 179.97438 * 6 5 4 8 8 C 1.46575 * 126.57943 * 0.02562 * 7 6 5 9 9 O 1.21716 * 120.00219 * 359.97438 * 8 7 6 10 10 N 1.34777 * 119.99469 * 179.97438 * 8 7 6 11 11 C 1.46504 * 119.99379 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.84906 * 336.19097 * 11 10 8 13 13 C 1.53775 * 113.61397 * 107.50635 * 11 10 8 14 14 C 1.53780 * 87.08448 * 139.98030 * 13 11 10 15 15 H 1.09002 * 113.69387 * 89.12282 * 14 13 11 16 16 C 1.50697 * 113.61437 * 220.01922 * 14 13 11 17 17 C 1.38241 * 120.00322 * 37.21843 * 16 14 13 18 18 C 1.38225 * 120.00256 * 179.78937 * 17 16 14 19 19 C 1.38240 * 120.00054 * 0.44291 * 18 17 16 20 20 C 1.38237 * 119.99975 * 359.80653 * 19 18 17 21 21 C 1.38233 * 120.00259 * 217.49334 * 16 14 13 22 22 C 1.53782 * 113.61053 * 205.00065 * 11 10 8 23 23 C 1.40555 * 106.84129 * 180.02562 * 7 6 5 24 24 N 1.30743 * 108.74448 * 359.97438 * 23 7 6 25 25 N 1.36576 * 120.22828 * 359.97438 * 6 5 4 26 26 C 1.36240 * 120.08420 * 359.97438 * 25 6 5 27 27 C 1.35191 * 120.70364 * 359.76190 * 26 25 6 28 28 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 29 29 H 1.09006 * 109.47099 * 239.99662 * 2 1 3 30 30 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 31 31 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 32 32 H 1.07994 * 120.37571 * 359.94796 * 5 4 2 33 33 H 0.96997 * 120.00536 * 359.97438 * 10 8 7 34 34 H 1.09004 * 113.61136 * 254.52354 * 13 11 10 35 35 H 1.08996 * 113.61762 * 25.42449 * 13 11 10 36 36 H 1.08007 * 119.99314 * 0.02562 * 17 16 14 37 37 H 1.08004 * 120.00324 * 180.27658 * 18 17 16 38 38 H 1.07999 * 119.99918 * 179.83577 * 19 18 17 39 39 H 1.07993 * 120.00117 * 179.97438 * 20 19 18 40 40 H 1.08003 * 119.99672 * 359.97438 * 21 16 14 41 41 H 1.08999 * 113.61522 * 334.56405 * 22 11 10 42 42 H 1.08998 * 113.61408 * 105.47125 * 22 11 10 43 43 H 1.07997 * 125.62883 * 179.97438 * 23 7 6 44 44 H 1.07993 * 119.64722 * 179.97438 * 26 25 6 45 45 H 1.07994 * 119.83944 * 180.24349 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.7162 -1.8204 1.1122 6 6 3.1715 -2.4634 2.2706 7 6 3.9753 -3.6006 2.4822 8 6 4.5755 -4.4503 1.4497 9 8 4.3957 -4.1972 0.2728 10 7 5.3266 -5.5120 1.8037 11 6 5.9270 -6.3610 0.7717 12 1 5.3956 -6.3121 -0.1787 13 6 7.4489 -6.1857 0.6385 14 6 7.5294 -7.7103 0.4542 15 1 7.4377 -8.0315 -0.5834 16 6 8.7002 -8.3429 1.1613 17 6 9.0993 -7.8695 2.3973 18 6 10.1704 -8.4525 3.0479 19 6 10.8485 -9.5031 2.4584 20 6 10.4528 -9.9732 1.2201 21 6 9.3788 -9.3929 0.5715 22 6 6.2129 -7.7962 1.2444 23 6 4.0912 -3.7641 3.8734 24 7 3.4191 -2.8119 4.4658 25 7 2.8323 -1.9819 3.5028 26 6 2.0490 -0.8724 3.6106 27 6 1.6026 -0.2327 2.5064 28 1 -0.3932 0.4418 0.7651 29 1 1.7923 -0.5139 -0.8900 30 1 1.5615 2.4679 -1.2085 31 1 1.5881 2.4585 1.2242 32 1 2.9830 -2.1991 0.1367 33 1 5.4702 -5.7135 2.7415 34 1 7.7478 -5.6227 -0.2458 35 1 7.9290 -5.8301 1.5501 36 1 8.5715 -7.0464 2.8563 37 1 10.4794 -8.0856 4.0155 38 1 11.6871 -9.9570 2.9655 39 1 10.9827 -10.7937 0.7594 40 1 9.0696 -9.7601 -0.3960 41 1 6.3550 -7.8809 2.3217 42 1 5.5139 -8.5334 0.8493 43 1 4.6442 -4.5471 4.3708 44 1 1.7847 -0.4980 4.5884 45 1 0.9857 0.6479 2.6081 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_11618758.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:55:28 Heat of formation + Delta-G solvation = 92.326431 kcal Electronic energy + Delta-G solvation = -29031.181443 eV Core-core repulsion = 24982.783922 eV Total energy + Delta-G solvation = -4048.397521 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.142 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -43.30645 -41.34758 -40.04641 -39.39531 -38.50517 -37.34657 -34.58056 -34.18285 -32.12863 -31.88199 -31.66509 -30.24750 -27.43578 -26.71610 -26.06054 -24.94946 -23.81465 -23.52847 -23.10270 -22.13902 -21.25951 -20.33264 -19.01591 -18.65066 -18.25326 -17.87478 -17.44921 -16.95607 -16.92010 -16.51876 -16.39728 -15.94141 -15.84280 -15.62667 -15.50243 -15.17281 -15.01380 -14.75163 -14.30461 -14.28627 -14.11539 -13.88811 -13.84986 -13.55038 -13.49196 -13.27821 -13.07009 -12.53144 -12.49317 -12.30705 -12.10133 -11.93041 -11.78749 -11.66588 -11.55809 -11.41408 -10.92021 -10.70629 -10.37729 -9.94939 -9.79873 -9.53001 -8.77261 -5.06472 -0.56763 -0.17116 0.45078 0.52106 0.98285 1.06563 1.11037 1.47054 1.79794 2.05166 2.30360 2.59667 2.85623 3.04526 3.13456 3.26712 3.40911 3.47952 3.61841 3.70304 3.74450 3.83637 3.91456 3.97444 4.03670 4.10010 4.12457 4.17423 4.24189 4.25867 4.35411 4.49407 4.56882 4.61160 4.67878 4.69314 4.76652 4.81339 4.97006 5.02583 5.06480 5.10473 5.14670 5.16903 5.23308 5.29403 5.59591 5.62249 5.63823 5.66156 5.75363 6.12037 6.20735 6.30086 6.64428 7.42008 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.521 6.521 2 C -0.076 4.076 3 Si 0.696 3.304 4 C -0.066 4.066 5 C -0.090 4.090 6 C 0.169 3.831 7 C -0.315 4.315 8 C 0.602 3.398 9 O -0.549 6.549 10 N -0.719 5.719 11 C 0.127 3.873 12 H 0.118 0.882 13 C -0.145 4.145 14 C -0.072 4.072 15 H 0.102 0.898 16 C -0.069 4.069 17 C -0.118 4.118 18 C -0.118 4.118 19 C -0.125 4.125 20 C -0.118 4.118 21 C -0.116 4.116 22 C -0.136 4.136 23 C 0.120 3.880 24 N -0.313 5.313 25 N -0.267 5.267 26 C 0.123 3.877 27 C -0.162 4.162 28 H 0.375 0.625 29 H 0.127 0.873 30 H -0.247 1.247 31 H -0.253 1.253 32 H 0.165 0.835 33 H 0.398 0.602 34 H 0.076 0.924 35 H 0.089 0.911 36 H 0.121 0.879 37 H 0.121 0.879 38 H 0.121 0.879 39 H 0.122 0.878 40 H 0.122 0.878 41 H 0.088 0.912 42 H 0.078 0.922 43 H 0.198 0.802 44 H 0.177 0.823 45 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.665 0.970 2.363 3.049 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.184 4.184 3 Si 0.594 3.406 4 C -0.072 4.072 5 C -0.109 4.109 6 C 0.049 3.951 7 C -0.330 4.330 8 C 0.391 3.609 9 O -0.427 6.427 10 N -0.369 5.369 11 C 0.022 3.978 12 H 0.136 0.864 13 C -0.183 4.183 14 C -0.090 4.090 15 H 0.121 0.879 16 C -0.069 4.069 17 C -0.136 4.136 18 C -0.136 4.136 19 C -0.143 4.143 20 C -0.136 4.136 21 C -0.134 4.134 22 C -0.174 4.174 23 C -0.061 4.061 24 N -0.133 5.133 25 N -0.031 5.031 26 C -0.003 4.003 27 C -0.184 4.184 28 H 0.223 0.777 29 H 0.144 0.856 30 H -0.171 1.171 31 H -0.177 1.177 32 H 0.183 0.817 33 H 0.232 0.768 34 H 0.095 0.905 35 H 0.107 0.893 36 H 0.139 0.861 37 H 0.139 0.861 38 H 0.139 0.861 39 H 0.140 0.860 40 H 0.140 0.860 41 H 0.107 0.893 42 H 0.097 0.903 43 H 0.215 0.785 44 H 0.194 0.806 45 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 1.100 2.092 2.205 3.232 hybrid contribution -0.611 -0.770 0.500 1.103 sum 0.489 1.322 2.706 3.051 Atomic orbital electron populations 1.86710 1.16867 1.80018 1.49147 1.25081 0.84315 1.11346 0.97694 0.94405 0.91668 0.73241 0.81272 1.20414 0.96175 0.95061 0.95535 1.20704 0.97896 0.94132 0.98179 1.19299 0.95580 0.94091 0.86169 1.19645 1.16111 1.03685 0.93577 1.16857 0.77148 0.79562 0.87284 1.90780 1.61658 1.71751 1.18537 1.45680 1.52585 1.28877 1.09747 1.22497 0.92977 0.89179 0.93124 0.86381 1.23622 0.96277 0.95168 1.03269 1.21336 0.92407 0.95756 0.99537 0.87947 1.19652 0.96382 0.96072 0.94795 1.20994 0.97482 1.00089 0.95001 1.21167 0.95991 0.96517 0.99935 1.21197 1.00057 0.97228 0.95801 1.21189 0.97083 0.99915 0.95387 1.21090 0.95966 0.96319 1.00045 1.23461 0.96571 0.96426 1.00973 1.24065 0.94324 0.95712 0.92006 1.77645 1.18544 1.06407 1.10745 1.46079 1.32158 1.18987 1.05867 1.21514 0.91965 0.85077 1.01741 1.20707 1.04422 1.02523 0.90712 0.77717 0.85566 1.17121 1.17685 0.81717 0.76761 0.90532 0.89262 0.86129 0.86069 0.86123 0.86033 0.86043 0.89303 0.90293 0.78518 0.80580 0.82605 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.02 12.88 -35.23 -0.45 -0.43 16 2 C -0.08 0.10 2.84 36.01 0.10 0.20 16 3 Si 0.70 -1.57 31.95 -169.99 -5.43 -7.00 16 4 C -0.07 0.05 4.54 -104.55 -0.47 -0.43 16 5 C -0.09 -0.12 9.35 -39.53 -0.37 -0.49 16 6 C 0.17 0.44 6.76 -84.07 -0.57 -0.13 16 7 C -0.32 -0.70 6.17 -104.68 -0.65 -1.35 16 8 C 0.60 1.65 7.78 -12.90 -0.10 1.55 16 9 O -0.55 -3.22 15.30 5.17 0.08 -3.14 16 10 N -0.72 0.29 5.35 -54.35 -0.29 0.00 16 11 C 0.13 -0.06 4.24 -67.12 -0.28 -0.34 16 12 H 0.12 0.13 7.46 -51.93 -0.39 -0.25 16 13 C -0.14 0.11 7.25 -25.92 -0.19 -0.07 16 14 C -0.07 0.08 3.98 -90.96 -0.36 -0.28 16 15 H 0.10 -0.15 8.09 -51.93 -0.42 -0.57 16 16 C -0.07 -0.01 5.29 -104.62 -0.55 -0.57 16 17 C -0.12 0.00 8.62 -39.59 -0.34 -0.34 16 18 C -0.12 -0.03 10.05 -39.59 -0.40 -0.43 16 19 C -0.12 -0.07 10.05 -39.58 -0.40 -0.46 16 20 C -0.12 -0.07 10.05 -39.58 -0.40 -0.47 16 21 C -0.12 -0.06 9.71 -39.58 -0.38 -0.45 16 22 C -0.14 0.23 7.30 -25.91 -0.19 0.04 16 23 C 0.12 0.06 11.44 -17.14 -0.20 -0.14 16 24 N -0.31 -0.76 12.57 30.75 0.39 -0.38 16 25 N -0.27 -0.50 3.86 -10.55 -0.04 -0.54 16 26 C 0.12 -0.13 11.18 -16.68 -0.19 -0.31 16 27 C -0.16 0.34 8.38 -39.95 -0.33 0.01 16 28 H 0.38 -1.37 8.10 45.56 0.37 -1.00 16 29 H 0.13 -0.21 7.71 -51.93 -0.40 -0.61 16 30 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 31 H -0.25 0.30 7.03 56.52 0.40 0.70 16 32 H 0.17 0.26 7.01 -52.49 -0.37 -0.10 16 33 H 0.40 -1.23 7.65 -40.82 -0.31 -1.55 16 34 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.09 -0.10 6.30 -51.93 -0.33 -0.43 16 36 H 0.12 -0.20 6.64 -52.48 -0.35 -0.54 16 37 H 0.12 -0.16 8.06 -52.48 -0.42 -0.58 16 38 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 39 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 40 H 0.12 -0.11 8.05 -52.48 -0.42 -0.53 16 41 H 0.09 -0.20 7.71 -51.93 -0.40 -0.60 16 42 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 43 H 0.20 -0.74 7.46 -52.49 -0.39 -1.13 16 44 H 0.18 -0.66 8.06 -52.49 -0.42 -1.08 16 45 H 0.16 -0.76 7.25 -52.49 -0.38 -1.14 16 LS Contribution 378.96 15.07 5.71 5.71 Total: 0.00 -9.73 378.96 -11.84 -21.57 By element: Atomic # 1 Polarization: -5.81 SS G_CDS: -5.53 Total: -11.34 kcal Atomic # 6 Polarization: 1.82 SS G_CDS: -6.27 Total: -4.45 kcal Atomic # 7 Polarization: -0.97 SS G_CDS: 0.06 Total: -0.91 kcal Atomic # 8 Polarization: -3.20 SS G_CDS: -0.37 Total: -3.57 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: -5.43 Total: -7.00 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -9.73 -11.84 -21.57 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_11618758.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 113.896 kcal (2) G-P(sol) polarization free energy of solvation -9.733 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 104.163 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.836 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.569 kcal (6) G-S(sol) free energy of system = (1) + (5) 92.326 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds