Wall clock time and date at job start Sun Mar 7 2021 08:55:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.35459 * 125.56249 * 2 1 4 4 C 1.50697 * 126.06532 * 0.02562 * 3 2 1 5 5 O 1.42900 * 109.46940 * 155.78297 * 4 3 2 6 6 Si 1.86297 * 109.47363 * 35.78392 * 4 3 2 7 7 C 1.39831 * 107.86089 * 180.02562 * 3 2 1 8 8 C 1.50704 * 126.45607 * 180.02562 * 7 3 2 9 9 C 1.37869 * 107.09080 * 359.97438 * 7 3 2 10 10 C 1.46675 * 126.23754 * 179.73569 * 9 7 3 11 11 O 1.21703 * 119.99943 * 359.97438 * 10 9 7 12 12 N 1.34773 * 120.00596 * 180.02562 * 10 9 7 13 13 C 1.46493 * 120.00314 * 180.02562 * 12 10 9 14 14 H 1.09001 * 112.85332 * 23.80321 * 13 12 10 15 15 C 1.53780 * 113.61627 * 155.00046 * 13 12 10 16 16 C 1.53781 * 87.08368 * 139.97934 * 15 13 12 17 17 H 1.08999 * 113.61556 * 89.11872 * 16 15 13 18 18 C 1.50704 * 113.61787 * 219.93697 * 16 15 13 19 19 C 1.38237 * 119.99928 * 59.72560 * 18 16 15 20 20 C 1.38230 * 119.99801 * 179.76970 * 19 18 16 21 21 C 1.38236 * 120.00382 * 0.48144 * 20 19 18 22 22 C 1.38236 * 119.99478 * 359.79543 * 21 20 19 23 23 C 1.38237 * 120.00584 * 359.95256 * 22 21 20 24 24 C 1.53777 * 87.08261 * 334.56976 * 16 15 13 25 25 N 1.35527 * 125.56518 * 180.02562 * 2 1 3 26 26 H 1.09001 * 109.46965 * 83.98333 * 1 2 3 27 27 H 1.09002 * 109.46927 * 203.98425 * 1 2 3 28 28 H 1.08999 * 109.46963 * 323.98031 * 1 2 3 29 29 H 1.08997 * 109.47112 * 275.77951 * 4 3 2 30 30 H 0.96702 * 114.00223 * 300.00175 * 5 4 3 31 31 H 1.48495 * 110.00142 * 58.67830 * 6 4 3 32 32 H 1.48502 * 109.99972 * 180.02562 * 6 4 3 33 33 H 1.09005 * 109.46769 * 269.99821 * 8 7 3 34 34 H 1.09003 * 109.46935 * 29.99334 * 8 7 3 35 35 H 1.08989 * 109.47729 * 149.99659 * 8 7 3 36 36 H 0.97000 * 119.99898 * 0.02562 * 12 10 9 37 37 H 1.08995 * 113.61704 * 254.53156 * 15 13 12 38 38 H 1.09003 * 113.61312 * 25.35360 * 15 13 12 39 39 H 1.08001 * 119.99876 * 0.02562 * 19 18 16 40 40 H 1.08008 * 119.99900 * 180.25591 * 20 19 18 41 41 H 1.07990 * 120.00333 * 179.77023 * 21 20 19 42 42 H 1.08001 * 120.00245 * 179.97438 * 22 21 20 43 43 H 1.07996 * 120.00685 * 180.02562 * 23 22 21 44 44 H 1.09004 * 113.61681 * 270.88630 * 24 16 15 45 45 H 1.09000 * 113.62234 * 139.97793 * 24 16 15 46 46 H 0.97006 * 125.68275 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1019 0.0000 4 6 1.8199 2.5321 0.0005 5 8 2.8360 3.3712 0.5530 6 14 0.2723 2.6721 1.0282 7 6 3.6269 0.6768 -0.0006 8 6 4.8486 1.5592 -0.0003 9 6 3.6122 -0.7018 -0.0004 10 6 4.7860 -1.5815 -0.0063 11 8 5.9050 -1.1030 -0.0125 12 7 4.6254 -2.9196 -0.0058 13 6 5.7977 -3.7981 -0.0111 14 1 6.6893 -3.3165 0.3904 15 6 5.5276 -5.1895 0.5853 16 6 6.4047 -5.7570 -0.5432 17 1 7.4630 -5.8117 -0.2882 18 6 5.8772 -7.0409 -1.1303 19 6 4.6240 -7.0709 -1.7130 20 6 4.1422 -8.2473 -2.2558 21 6 4.9093 -9.3962 -2.2070 22 6 6.1602 -9.3675 -1.6192 23 6 6.6443 -8.1899 -1.0810 24 6 6.0307 -4.5064 -1.3561 25 7 2.2953 -1.1024 -0.0005 26 1 -0.3633 0.1077 -1.0220 27 1 -0.3633 -0.9390 0.4177 28 1 -0.3633 0.8312 0.6043 29 1 1.6068 2.8445 -1.0217 30 1 3.0769 3.1502 1.4631 31 1 0.5416 2.2189 2.4164 32 1 -0.2066 4.0778 1.0362 33 1 5.1429 1.7726 -1.0279 34 1 4.6220 2.4931 0.5142 35 1 5.6643 1.0503 0.5130 36 1 3.7336 -3.3010 -0.0019 37 1 5.9517 -5.3282 1.5797 38 1 4.4832 -5.4955 0.5241 39 1 4.0231 -6.1741 -1.7479 40 1 3.1647 -8.2698 -2.7147 41 1 4.5314 -10.3162 -2.6277 42 1 6.7595 -10.2652 -1.5806 43 1 7.6216 -8.1673 -0.6222 44 1 5.1241 -4.6261 -1.9493 45 1 6.8610 -4.0934 -1.9290 46 1 1.9834 -2.0210 -0.0006 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16147626_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:55:30 Heat of formation + Delta-G solvation = 28.137512 kcal Electronic energy + Delta-G solvation = -27181.688584 eV Core-core repulsion = 23425.074336 eV Total energy + Delta-G solvation = -3756.614248 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.162 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -42.69646 -41.36383 -40.07186 -38.65222 -37.95980 -34.97279 -33.65383 -33.02481 -31.85472 -31.59606 -29.35559 -27.77239 -26.74480 -26.53564 -25.49332 -23.60784 -22.94692 -22.01063 -20.93357 -20.67765 -20.15084 -19.19267 -18.23244 -17.60758 -17.07043 -16.70552 -16.59700 -16.41139 -16.01213 -15.95897 -15.58213 -15.37737 -15.07093 -14.79345 -14.39614 -14.29065 -14.20365 -14.12227 -13.99649 -13.90398 -13.71025 -13.49643 -13.29390 -13.18283 -13.05303 -12.58395 -12.53416 -12.36961 -12.31045 -11.86221 -11.84393 -11.68982 -11.48935 -11.13030 -10.53107 -10.21307 -9.82179 -9.56530 -9.52782 -8.99183 -4.74007 0.33784 0.42781 0.49778 1.20940 1.63830 1.68745 1.94368 2.06293 2.14359 2.24444 2.83017 3.38796 3.41785 3.64274 3.69123 3.80661 3.82268 3.90859 3.96757 4.03732 4.12661 4.16063 4.20078 4.28906 4.44622 4.53344 4.60993 4.62314 4.64881 4.67656 4.70257 4.79609 4.80404 4.83750 4.88293 4.93797 4.98373 5.06308 5.11455 5.14750 5.18546 5.24810 5.31903 5.47492 5.58242 5.64210 5.68212 5.73082 5.82434 6.12014 6.38077 6.49907 6.58183 7.08553 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.083 3.917 3 C -0.231 4.231 4 C -0.046 4.046 5 O -0.549 6.549 6 Si 0.741 3.259 7 C -0.073 4.073 8 C -0.094 4.094 9 C -0.080 4.080 10 C 0.588 3.412 11 O -0.568 6.568 12 N -0.705 5.705 13 C 0.121 3.879 14 H 0.099 0.901 15 C -0.122 4.122 16 C -0.067 4.067 17 H 0.104 0.896 18 C -0.077 4.077 19 C -0.124 4.124 20 C -0.128 4.128 21 C -0.138 4.138 22 C -0.131 4.131 23 C -0.131 4.131 24 C -0.141 4.141 25 N -0.516 5.516 26 H 0.122 0.878 27 H 0.111 0.889 28 H 0.091 0.909 29 H 0.117 0.883 30 H 0.381 0.619 31 H -0.297 1.297 32 H -0.302 1.302 33 H 0.053 0.947 34 H 0.085 0.915 35 H 0.056 0.944 36 H 0.410 0.590 37 H 0.082 0.918 38 H 0.103 0.897 39 H 0.136 0.864 40 H 0.137 0.863 41 H 0.132 0.868 42 H 0.132 0.868 43 H 0.129 0.871 44 H 0.097 0.903 45 H 0.063 0.937 46 H 0.434 0.566 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.232 -6.825 -0.475 10.704 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.037 4.037 3 C -0.237 4.237 4 C -0.155 4.155 5 O -0.356 6.356 6 Si 0.646 3.354 7 C -0.082 4.082 8 C -0.151 4.151 9 C -0.192 4.192 10 C 0.377 3.623 11 O -0.448 6.448 12 N -0.356 5.356 13 C 0.016 3.984 14 H 0.117 0.883 15 C -0.160 4.160 16 C -0.086 4.086 17 H 0.122 0.878 18 C -0.077 4.077 19 C -0.142 4.142 20 C -0.146 4.146 21 C -0.156 4.156 22 C -0.149 4.149 23 C -0.149 4.149 24 C -0.179 4.179 25 N -0.115 5.115 26 H 0.141 0.859 27 H 0.129 0.871 28 H 0.107 0.893 29 H 0.135 0.865 30 H 0.230 0.770 31 H -0.224 1.224 32 H -0.231 1.231 33 H 0.071 0.929 34 H 0.104 0.896 35 H 0.075 0.925 36 H 0.247 0.753 37 H 0.101 0.899 38 H 0.121 0.879 39 H 0.154 0.846 40 H 0.155 0.845 41 H 0.150 0.850 42 H 0.150 0.850 43 H 0.147 0.853 44 H 0.115 0.885 45 H 0.082 0.918 46 H 0.275 0.725 Dipole moment (debyes) X Y Z Total from point charges -7.829 -6.088 -0.376 9.925 hybrid contribution 1.249 -0.260 0.598 1.409 sum -6.580 -6.347 0.222 9.145 Atomic orbital electron populations 1.20791 0.84253 1.03294 1.05726 1.20682 0.95133 0.84860 1.03008 1.19665 0.92581 0.95795 1.15681 1.24545 0.99429 0.86239 1.05255 1.86523 1.57499 1.58163 1.33451 0.94324 0.81898 0.80526 0.78604 1.19932 0.95352 0.91545 1.01371 1.20456 0.94071 0.98866 1.01682 1.19929 0.83863 0.93673 1.21729 1.17253 0.87187 0.82294 0.75567 1.90820 1.25914 1.75877 1.52168 1.45697 1.10368 1.04619 1.74919 1.22513 0.89347 0.88965 0.97556 0.88321 1.23397 1.01500 0.92387 0.98673 1.21289 1.00302 0.90476 0.96518 0.87826 1.19784 0.94720 0.94636 0.98575 1.21203 0.95696 0.98650 0.98631 1.21444 1.00643 0.92923 0.99559 1.21460 0.94981 0.99249 0.99886 1.21428 0.96542 0.98587 0.98317 1.21318 1.00459 0.92793 1.00326 1.23594 1.02634 0.94937 0.96775 1.41672 1.03900 1.09260 1.56652 0.85949 0.87084 0.89286 0.86528 0.77014 1.22382 1.23089 0.92873 0.89609 0.92537 0.75339 0.89932 0.87912 0.84600 0.84508 0.84967 0.85041 0.85274 0.88462 0.91768 0.72460 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 1.18 9.41 71.24 0.67 1.85 16 2 C 0.08 -0.39 6.81 41.35 0.28 -0.11 16 3 C -0.23 -0.48 5.32 -20.12 -0.11 -0.59 16 4 C -0.05 -0.07 3.06 71.24 0.22 0.15 16 5 O -0.55 -3.16 10.24 -148.98 -1.53 -4.68 16 6 Si 0.74 -1.05 27.72 68.60 1.90 0.85 16 7 C -0.07 -0.53 6.16 -19.56 -0.12 -0.65 16 8 C -0.09 -0.93 9.43 71.24 0.67 -0.26 16 9 C -0.08 -0.31 7.06 40.35 0.28 -0.03 16 10 C 0.59 3.72 7.79 86.45 0.67 4.39 16 11 O -0.57 -8.61 14.41 -4.36 -0.06 -8.67 16 12 N -0.71 1.34 5.35 -444.00 -2.38 -1.04 16 13 C 0.12 -0.13 4.24 45.52 0.19 0.06 16 14 H 0.10 0.37 7.46 -2.39 -0.02 0.36 16 15 C -0.12 0.61 7.29 31.12 0.23 0.84 16 16 C -0.07 0.19 3.98 -11.01 -0.04 0.15 16 17 H 0.10 -0.30 8.09 -2.39 -0.02 -0.32 16 18 C -0.08 0.05 5.29 -19.86 -0.11 -0.05 16 19 C -0.12 0.24 8.60 22.27 0.19 0.43 16 20 C -0.13 0.16 10.05 22.27 0.22 0.38 16 21 C -0.14 0.01 10.05 22.27 0.22 0.23 16 22 C -0.13 -0.07 10.05 22.27 0.22 0.16 16 23 C -0.13 -0.07 9.71 22.27 0.22 0.15 16 24 C -0.14 0.25 7.26 31.12 0.23 0.47 16 25 N -0.52 2.67 5.99 -171.93 -1.03 1.64 16 26 H 0.12 -2.14 8.14 -2.39 -0.02 -2.16 16 27 H 0.11 -2.04 8.14 -2.39 -0.02 -2.06 16 28 H 0.09 -1.18 2.71 -2.39 -0.01 -1.18 16 29 H 0.12 0.02 7.96 -2.39 -0.02 0.00 16 30 H 0.38 0.62 8.08 -74.06 -0.60 0.02 16 31 H -0.30 -1.30 7.11 99.48 0.71 -0.59 16 32 H -0.30 -2.03 7.11 99.48 0.71 -1.32 16 33 H 0.05 0.61 8.14 -2.38 -0.02 0.59 16 34 H 0.09 0.67 5.12 -2.39 -0.01 0.66 16 35 H 0.06 0.75 6.50 -2.39 -0.02 0.73 16 36 H 0.41 -3.74 7.86 -92.71 -0.73 -4.47 16 37 H 0.08 -0.40 8.14 -2.39 -0.02 -0.42 16 38 H 0.10 -0.80 7.69 -2.39 -0.02 -0.81 16 39 H 0.14 -0.84 6.68 -2.91 -0.02 -0.86 16 40 H 0.14 -0.70 8.06 -2.91 -0.02 -0.72 16 41 H 0.13 -0.42 8.06 -2.92 -0.02 -0.45 16 42 H 0.13 -0.32 8.06 -2.91 -0.02 -0.34 16 43 H 0.13 -0.25 8.05 -2.91 -0.02 -0.28 16 44 H 0.10 -0.35 6.33 -2.39 -0.02 -0.36 16 45 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 46 H 0.43 -5.72 8.19 -92.70 -0.76 -6.48 16 Total: 0.00 -24.78 365.07 0.05 -24.73 By element: Atomic # 1 Polarization: -19.39 SS G_CDS: -1.01 Total: -20.39 kcal Atomic # 6 Polarization: 3.41 SS G_CDS: 4.15 Total: 7.56 kcal Atomic # 7 Polarization: 4.01 SS G_CDS: -3.41 Total: 0.60 kcal Atomic # 8 Polarization: -11.76 SS G_CDS: -1.59 Total: -13.35 kcal Atomic # 14 Polarization: -1.05 SS G_CDS: 1.90 Total: 0.85 kcal Total: -24.78 0.05 -24.73 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.870 kcal (2) G-P(sol) polarization free energy of solvation -24.781 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.089 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.048 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.732 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.138 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds