Wall clock time and date at job start Sun Mar 7 2021 08:55:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35665 * 116.99887 * 2 1 4 4 C 1.38391 * 120.12038 * 0.02562 * 3 2 1 5 5 C 1.38732 * 120.03319 * 180.02562 * 4 3 2 6 6 O 1.35717 * 119.85925 * 179.97438 * 5 4 3 7 7 C 1.42893 * 117.00448 * 359.97438 * 6 5 4 8 8 C 1.39142 * 120.27242 * 359.97438 * 5 4 3 9 9 C 1.50700 * 119.87816 * 179.97438 * 8 5 4 10 10 O 1.42899 * 109.46997 * 75.00262 * 9 8 5 11 11 Si 1.86299 * 109.46924 * 195.00448 * 9 8 5 12 12 C 1.37582 * 120.23916 * 359.97438 * 8 5 4 13 13 C 1.39816 * 119.96462 * 359.74303 * 12 8 5 14 14 C 1.47303 * 120.13519 * 180.27808 * 13 12 8 15 15 O 1.21622 * 119.99986 * 180.27368 * 14 13 12 16 16 N 1.34777 * 120.00401 * 0.27449 * 14 13 12 17 17 C 1.46492 * 120.00297 * 180.02562 * 16 14 13 18 18 H 1.08997 * 112.85099 * 23.79854 * 17 16 14 19 19 C 1.53782 * 113.61559 * 154.99854 * 17 16 14 20 20 C 1.53780 * 87.08266 * 139.97718 * 19 17 16 21 21 H 1.09001 * 113.61438 * 89.11307 * 20 19 17 22 22 C 1.50694 * 113.61488 * 219.93397 * 20 19 17 23 23 C 1.38231 * 120.00333 * 59.73047 * 22 20 19 24 24 C 1.38235 * 120.00468 * 179.74691 * 23 22 20 25 25 C 1.38233 * 119.99892 * 0.54302 * 24 23 22 26 26 C 1.38236 * 119.99779 * 359.70603 * 25 24 23 27 27 C 1.38235 * 119.99942 * 0.02562 * 26 25 24 28 28 C 1.53781 * 87.08207 * 334.56679 * 20 19 17 29 29 H 1.08998 * 109.47043 * 300.00131 * 1 2 3 30 30 H 1.08999 * 109.47144 * 59.99729 * 1 2 3 31 31 H 1.08996 * 109.46732 * 179.97438 * 1 2 3 32 32 H 1.08004 * 119.98439 * 359.97438 * 4 3 2 33 33 H 1.08994 * 109.47547 * 300.00145 * 7 6 5 34 34 H 1.09002 * 109.47253 * 60.00327 * 7 6 5 35 35 H 1.09003 * 109.47211 * 179.97438 * 7 6 5 36 36 H 1.09000 * 109.46949 * 315.00230 * 9 8 5 37 37 H 0.96701 * 113.99717 * 180.02562 * 10 9 8 38 38 H 1.48493 * 110.00161 * 178.68222 * 11 9 8 39 39 H 1.48505 * 109.99749 * 299.99802 * 11 9 8 40 40 H 1.08002 * 120.01489 * 179.97438 * 12 8 5 41 41 H 0.97008 * 119.99418 * 359.97438 * 16 14 13 42 42 H 1.08997 * 113.61573 * 254.52714 * 19 17 16 43 43 H 1.09003 * 113.61198 * 25.42925 * 19 17 16 44 44 H 1.08008 * 119.99932 * 359.97438 * 23 22 20 45 45 H 1.08000 * 120.00496 * 180.27529 * 24 23 22 46 46 H 1.08000 * 120.00345 * 179.72639 * 25 24 23 47 47 H 1.07998 * 120.00184 * 179.97438 * 26 25 24 48 48 H 1.08004 * 119.99670 * 179.97438 * 27 26 25 49 49 H 1.08999 * 113.61284 * 270.88245 * 28 20 19 50 50 H 1.09004 * 113.61447 * 139.97536 * 28 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2088 0.0000 4 6 1.2936 2.3710 0.0005 5 6 1.9253 3.6062 0.0000 6 8 1.1850 4.7437 0.0000 7 6 -0.2360 4.5931 0.0000 8 6 3.3145 3.6835 -0.0005 9 6 3.9915 5.0299 -0.0017 10 8 3.8944 5.6130 1.2993 11 14 5.7860 4.8223 -0.4569 12 6 4.0724 2.5352 0.0000 13 6 3.4462 1.2852 0.0065 14 6 4.2539 0.0534 0.0133 15 8 3.7066 -1.0327 0.0139 16 7 5.5995 0.1299 0.0188 17 6 6.4028 -1.0951 0.0249 18 1 5.8681 -1.9540 -0.3807 19 6 7.8110 -0.9114 -0.5650 20 6 8.3177 -1.8246 0.5637 21 1 8.3070 -2.8838 0.3065 22 6 9.6294 -1.3798 1.1573 23 6 9.7354 -0.1323 1.7431 24 6 10.9373 0.2737 2.2922 25 6 12.0363 -0.5634 2.2456 26 6 11.9318 -1.8090 1.6552 27 6 10.7284 -2.2171 1.1110 28 6 7.0894 -1.3747 1.3723 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5139 -0.8899 31 1 -0.3633 -1.0277 -0.0005 32 1 0.2149 2.3164 0.0005 33 1 -0.5432 4.0438 -0.8899 34 1 -0.5431 4.0439 0.8900 35 1 -0.7056 5.5767 0.0005 36 1 3.5051 5.6804 -0.7286 37 1 4.3094 6.4833 1.3722 38 1 6.4574 6.1463 -0.4927 39 1 6.4603 3.9373 0.5266 40 1 5.1505 2.5995 -0.0009 41 1 6.0360 0.9962 0.0179 42 1 7.9272 -1.3413 -1.5599 43 1 8.1821 0.1114 -0.4989 44 1 8.8781 0.5239 1.7750 45 1 11.0189 1.2467 2.7539 46 1 12.9765 -0.2445 2.6706 47 1 12.7905 -2.4629 1.6183 48 1 10.6469 -3.1901 0.6494 49 1 7.2632 -0.4787 1.9681 50 1 6.6229 -2.1788 1.9415 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:55:34 Heat of formation + Delta-G solvation = -48.780264 kcal Electronic energy + Delta-G solvation = -33518.476471 eV Core-core repulsion = 29058.362204 eV Total energy + Delta-G solvation = -4460.114267 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -42.01992 -41.26261 -40.24423 -39.70436 -38.58958 -38.27378 -37.06813 -34.54991 -32.32217 -32.08131 -31.76533 -31.16714 -29.05136 -28.27566 -26.68827 -26.22606 -25.94758 -24.40228 -23.57442 -22.93316 -22.02900 -21.32620 -20.36582 -19.88742 -18.52739 -18.51885 -18.24004 -17.86169 -17.20781 -17.04604 -16.77649 -16.53435 -16.38183 -16.28478 -15.89598 -15.74403 -15.64067 -15.45809 -15.23693 -15.18466 -14.35936 -14.27907 -14.20212 -14.14423 -13.86335 -13.78788 -13.70734 -13.47977 -13.46107 -13.02209 -12.89139 -12.59982 -12.52186 -12.48525 -12.27877 -12.14073 -11.89699 -11.76652 -11.64001 -11.58589 -11.38985 -10.61974 -10.42449 -9.92073 -9.84371 -9.78406 -9.51358 -9.07948 -5.04627 -0.13796 0.16827 0.46593 0.53448 1.21470 1.48875 1.83439 1.91198 2.08132 2.19062 2.26745 2.72597 2.87195 3.32927 3.47831 3.55077 3.68603 3.71253 3.77194 3.81179 3.87917 3.95567 3.99633 4.06105 4.07221 4.13493 4.15476 4.17093 4.18568 4.19370 4.25824 4.27429 4.43277 4.45355 4.55993 4.59162 4.62721 4.71261 4.75993 4.82633 4.84254 4.95888 5.01583 5.06076 5.09959 5.12366 5.18166 5.29541 5.35255 5.61061 5.65451 5.67545 5.77179 6.03738 6.13439 6.32867 6.49183 6.64533 7.44567 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.234 3.766 4 C -0.314 4.314 5 C 0.222 3.778 6 O -0.298 6.298 7 C 0.022 3.978 8 C -0.150 4.150 9 C -0.059 4.059 10 O -0.532 6.532 11 Si 0.676 3.324 12 C -0.007 4.007 13 C -0.209 4.209 14 C 0.568 3.432 15 O -0.518 6.518 16 N -0.723 5.723 17 C 0.126 3.874 18 H 0.120 0.880 19 C -0.136 4.136 20 C -0.071 4.071 21 H 0.103 0.897 22 C -0.068 4.068 23 C -0.118 4.118 24 C -0.118 4.118 25 C -0.125 4.125 26 C -0.118 4.118 27 C -0.116 4.116 28 C -0.146 4.146 29 H 0.057 0.943 30 H 0.058 0.942 31 H 0.107 0.893 32 H 0.145 0.855 33 H 0.060 0.940 34 H 0.059 0.941 35 H 0.106 0.894 36 H 0.077 0.923 37 H 0.378 0.622 38 H -0.257 1.257 39 H -0.252 1.252 40 H 0.139 0.861 41 H 0.396 0.604 42 H 0.080 0.920 43 H 0.088 0.912 44 H 0.120 0.880 45 H 0.121 0.879 46 H 0.121 0.879 47 H 0.122 0.878 48 H 0.122 0.878 49 H 0.088 0.912 50 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.785 3.164 -2.840 4.324 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.184 6.184 3 C 0.185 3.815 4 C -0.333 4.333 5 C 0.174 3.826 6 O -0.209 6.209 7 C -0.073 4.073 8 C -0.151 4.151 9 C -0.168 4.168 10 O -0.339 6.339 11 Si 0.577 3.423 12 C -0.026 4.026 13 C -0.213 4.213 14 C 0.356 3.644 15 O -0.394 6.394 16 N -0.375 5.375 17 C 0.021 3.979 18 H 0.137 0.863 19 C -0.174 4.174 20 C -0.090 4.090 21 H 0.121 0.879 22 C -0.068 4.068 23 C -0.136 4.136 24 C -0.136 4.136 25 C -0.143 4.143 26 C -0.136 4.136 27 C -0.134 4.134 28 C -0.185 4.185 29 H 0.076 0.924 30 H 0.076 0.924 31 H 0.125 0.875 32 H 0.163 0.837 33 H 0.078 0.922 34 H 0.077 0.923 35 H 0.124 0.876 36 H 0.095 0.905 37 H 0.225 0.775 38 H -0.182 1.182 39 H -0.177 1.177 40 H 0.157 0.843 41 H 0.231 0.769 42 H 0.099 0.901 43 H 0.107 0.893 44 H 0.138 0.862 45 H 0.139 0.861 46 H 0.139 0.861 47 H 0.140 0.860 48 H 0.140 0.860 49 H 0.106 0.894 50 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -0.570 1.921 -2.482 3.190 hybrid contribution -0.522 1.485 0.908 1.817 sum -1.092 3.406 -1.574 3.907 Atomic orbital electron populations 1.23239 0.78279 1.04822 1.01322 1.86403 1.21136 1.25017 1.85803 1.18713 0.90625 0.84392 0.87785 1.21272 1.01100 0.91435 1.19524 1.18693 0.90364 0.84704 0.88792 1.86125 1.19446 1.28627 1.86699 1.23206 0.77841 1.04585 1.01689 1.18296 0.90104 0.94155 1.12553 1.24527 1.10575 0.93626 0.88096 1.86622 1.80138 1.37374 1.29780 0.95321 0.74553 0.83179 0.89201 1.20819 0.99260 0.89985 0.92515 1.19037 0.90674 0.93536 1.18064 1.17817 0.81844 0.88524 0.76203 1.90841 1.71382 1.28649 1.48547 1.45883 1.05911 1.09291 1.76426 1.22508 0.89921 0.88696 0.96736 0.86261 1.23465 0.94468 1.00656 0.98841 1.21334 0.91005 1.00104 0.96568 0.87890 1.19649 0.94667 0.94259 0.98265 1.20997 0.97719 0.96055 0.98839 1.21161 0.93096 0.99777 0.99584 1.21189 0.98750 0.94514 0.99821 1.21188 0.97733 0.96457 0.98187 1.21087 0.92661 0.99657 0.99963 1.23632 0.95294 1.02323 0.97232 0.92444 0.92364 0.87487 0.83737 0.92174 0.92254 0.87574 0.90525 0.77479 1.18165 1.17652 0.84336 0.76863 0.90104 0.89312 0.86226 0.86129 0.86125 0.86016 0.86007 0.89358 0.90510 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.27 -1.08 8.56 -40.62 -0.35 -1.43 16 3 C 0.23 0.77 6.70 -38.74 -0.26 0.51 16 4 C -0.31 -0.44 8.01 -39.34 -0.31 -0.75 16 5 C 0.22 0.44 6.67 -39.06 -0.26 0.18 16 6 O -0.30 -0.43 9.80 -18.86 -0.18 -0.61 16 7 C 0.02 -0.05 9.80 101.05 0.99 0.95 16 8 C -0.15 -0.25 5.30 -104.53 -0.55 -0.81 16 9 C -0.06 -0.02 2.36 36.01 0.08 0.07 16 10 O -0.53 -0.84 12.86 -35.23 -0.45 -1.29 16 11 Si 0.68 -1.01 30.19 -169.99 -5.13 -6.15 16 12 C -0.01 -0.01 8.14 -39.23 -0.32 -0.33 16 13 C -0.21 -0.64 5.89 -104.83 -0.62 -1.26 16 14 C 0.57 2.31 7.76 -12.57 -0.10 2.21 16 15 O -0.52 -3.95 14.75 -16.66 -0.25 -4.20 16 16 N -0.72 -0.67 5.30 -54.13 -0.29 -0.95 16 17 C 0.13 0.06 4.24 -67.12 -0.28 -0.23 16 18 H 0.12 0.22 7.46 -51.93 -0.39 -0.17 16 19 C -0.14 0.16 7.30 -25.92 -0.19 -0.03 16 20 C -0.07 0.03 3.98 -90.96 -0.36 -0.33 16 21 H 0.10 -0.11 8.09 -51.93 -0.42 -0.53 16 22 C -0.07 -0.05 5.29 -104.63 -0.55 -0.61 16 23 C -0.12 -0.10 8.60 -39.59 -0.34 -0.44 16 24 C -0.12 -0.11 10.05 -39.58 -0.40 -0.51 16 25 C -0.12 -0.12 10.05 -39.58 -0.40 -0.52 16 26 C -0.12 -0.11 10.05 -39.58 -0.40 -0.51 16 27 C -0.12 -0.11 9.71 -39.58 -0.38 -0.49 16 28 C -0.15 -0.04 7.26 -25.92 -0.19 -0.23 16 29 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 30 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 31 H 0.11 -0.17 8.14 -51.93 -0.42 -0.60 16 32 H 0.15 -0.15 4.50 -52.48 -0.24 -0.38 16 33 H 0.06 -0.20 7.65 -51.93 -0.40 -0.59 16 34 H 0.06 -0.15 7.65 -51.93 -0.40 -0.55 16 35 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 36 H 0.08 -0.05 7.82 -51.93 -0.41 -0.45 16 37 H 0.38 -0.91 8.74 45.56 0.40 -0.51 16 38 H -0.26 -0.14 7.11 56.52 0.40 0.26 16 39 H -0.25 -0.03 6.74 56.52 0.38 0.35 16 40 H 0.14 -0.16 3.20 -52.49 -0.17 -0.33 16 41 H 0.40 -0.55 6.74 -40.82 -0.28 -0.82 16 42 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 43 H 0.09 -0.16 7.69 -51.93 -0.40 -0.55 16 44 H 0.12 -0.06 6.68 -52.48 -0.35 -0.41 16 45 H 0.12 -0.07 8.06 -52.49 -0.42 -0.49 16 46 H 0.12 -0.07 8.06 -52.49 -0.42 -0.50 16 47 H 0.12 -0.08 8.06 -52.49 -0.42 -0.51 16 48 H 0.12 -0.07 8.06 -52.48 -0.42 -0.49 16 49 H 0.09 0.02 6.33 -51.93 -0.33 -0.31 16 50 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 LS Contribution 404.92 15.07 6.10 6.10 Total: 0.00 -9.80 404.92 -11.16 -20.96 By element: Atomic # 1 Polarization: -3.53 SS G_CDS: -6.76 Total: -10.30 kcal Atomic # 6 Polarization: 1.72 SS G_CDS: -3.85 Total: -2.13 kcal Atomic # 7 Polarization: -0.67 SS G_CDS: -0.29 Total: -0.95 kcal Atomic # 8 Polarization: -6.30 SS G_CDS: -1.23 Total: -7.53 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.13 Total: -6.15 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -9.80 -11.16 -20.96 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.822 kcal (2) G-P(sol) polarization free energy of solvation -9.796 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.618 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.162 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.959 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.780 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds