Wall clock time and date at job start Sun Mar 7 2021 08:55:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86292 * 109.47375 * 2 1 4 4 C 1.50703 * 109.47124 * 239.99499 * 2 1 3 5 5 C 1.37855 * 119.89354 * 300.00435 * 4 2 1 6 6 C 1.39661 * 119.87904 * 179.97438 * 5 4 2 7 7 C 1.47690 * 120.16403 * 179.97438 * 6 5 4 8 8 O 1.21573 * 119.99807 * 179.97438 * 7 6 5 9 9 N 1.34777 * 120.00256 * 0.02562 * 7 6 5 10 10 C 1.46498 * 119.99828 * 180.27862 * 9 7 6 11 11 H 1.09000 * 112.84813 * 334.38493 * 10 9 7 12 12 C 1.53783 * 113.61758 * 105.58441 * 10 9 7 13 13 C 1.53953 * 87.01967 * 139.94777 * 12 10 9 14 14 H 1.09008 * 113.53404 * 89.18891 * 13 12 10 15 15 C 1.50695 * 113.74557 * 220.05571 * 13 12 10 16 16 C 1.38243 * 119.99921 * 37.32622 * 15 13 12 17 17 C 1.38234 * 119.99998 * 179.76301 * 16 15 13 18 18 C 1.38240 * 119.99716 * 0.49149 * 17 16 15 19 19 C 1.38231 * 120.00361 * 359.78726 * 18 17 16 20 20 C 1.38230 * 120.00335 * 217.59995 * 15 13 12 21 21 C 1.53779 * 113.61166 * 203.19166 * 10 9 7 22 22 C 1.39823 * 119.66391 * 0.25029 * 6 5 4 23 23 F 1.35105 * 120.10602 * 179.72545 * 22 6 5 24 24 C 1.38325 * 119.78088 * 359.47247 * 22 6 5 25 25 C 1.38197 * 120.11526 * 0.52910 * 24 22 6 26 26 H 0.96701 * 113.99572 * 60.00042 * 1 2 3 27 27 H 1.09006 * 109.46830 * 120.00112 * 2 1 3 28 28 H 1.48502 * 110.00153 * 59.99613 * 3 2 1 29 29 H 1.48497 * 110.00248 * 181.32230 * 3 2 1 30 30 H 1.07998 * 120.05687 * 0.02562 * 5 4 2 31 31 H 0.97001 * 119.99727 * 359.97438 * 9 7 6 32 32 H 1.08995 * 113.61864 * 254.52969 * 12 10 9 33 33 H 1.08999 * 113.60888 * 25.43011 * 12 10 9 34 34 H 1.08003 * 119.99319 * 0.02562 * 16 15 13 35 35 H 1.07999 * 120.00188 * 180.24891 * 17 16 15 36 36 H 1.08006 * 119.99461 * 179.76520 * 18 17 16 37 37 H 1.07999 * 120.00338 * 179.97438 * 19 18 17 38 38 H 1.08001 * 120.00308 * 0.02562 * 20 15 13 39 39 H 1.08996 * 113.61592 * 334.56671 * 21 10 9 40 40 H 1.09000 * 113.61393 * 105.38671 * 21 10 9 41 41 H 1.08002 * 119.93880 * 180.27155 * 24 22 6 42 42 H 1.08004 * 119.83036 * 179.72114 * 25 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.5969 -2.0304 -1.4463 6 6 2.0622 -2.6884 -2.5870 7 6 1.7082 -4.1024 -2.8242 8 8 2.1145 -4.6722 -3.8184 9 7 0.9339 -4.7610 -1.9392 10 6 0.5879 -6.1654 -2.1716 11 1 0.6107 -6.4380 -3.2267 12 6 1.3509 -7.1460 -1.2654 13 6 0.0333 -7.9329 -1.1433 14 1 -0.0949 -8.6900 -1.9170 15 6 -0.2313 -8.4620 0.2427 16 6 0.1132 -7.7070 1.3483 17 6 -0.1339 -8.1902 2.6196 18 6 -0.7164 -9.4329 2.7855 19 6 -1.0556 -10.1904 1.6801 20 6 -0.8133 -9.7048 0.4087 21 6 -0.6932 -6.6121 -1.4475 22 6 2.8695 -2.0033 -3.5002 23 9 3.3291 -2.6328 -4.6037 24 6 3.1918 -0.6775 -3.2726 25 6 2.7264 -0.0352 -2.1409 26 1 -0.3933 0.4417 -0.7651 27 1 1.7923 -0.5139 0.8900 28 1 1.5615 2.4679 1.2084 29 1 3.5346 1.7702 -0.0322 30 1 0.9756 -2.5542 -0.7351 31 1 0.6095 -4.3063 -1.1462 32 1 2.1407 -7.6925 -1.7807 33 1 1.6839 -6.7038 -0.3265 34 1 0.5716 -6.7377 1.2185 35 1 0.1315 -7.5986 3.4833 36 1 -0.9060 -9.8120 3.7789 37 1 -1.5102 -11.1614 1.8097 38 1 -1.0781 -10.2968 -0.4549 39 1 -0.9200 -6.0237 -0.5585 40 1 -1.5515 -6.7268 -2.1095 41 1 3.8116 -0.1446 -3.9785 42 1 2.9846 0.9988 -1.9655 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:55:37 Heat of formation + Delta-G solvation = -29.007716 kcal Electronic energy + Delta-G solvation = -26787.898837 eV Core-core repulsion = 22807.627619 eV Total energy + Delta-G solvation = -3980.271218 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.126 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -49.85955 -41.65487 -40.86434 -39.85677 -38.64690 -37.59101 -34.87922 -32.82568 -32.37998 -31.85311 -31.46085 -26.80551 -26.77410 -26.53396 -25.11425 -23.67688 -23.31478 -22.19412 -21.56608 -20.46496 -19.18960 -18.41532 -18.34549 -18.11222 -17.31755 -16.94899 -16.81112 -16.40701 -16.34371 -16.06712 -15.86065 -15.76503 -15.61366 -15.27132 -14.93676 -14.56646 -14.36666 -14.33843 -14.20125 -13.94362 -13.75512 -13.56921 -13.33009 -13.07761 -12.90466 -12.59922 -12.35799 -12.28998 -11.96278 -11.86413 -11.72592 -11.50004 -11.00150 -10.61736 -10.43709 -10.09108 -9.85170 -9.83313 -9.57345 -5.19382 -0.53060 -0.12448 0.41211 0.48580 1.10156 1.46965 1.64787 1.83245 1.99976 2.46397 2.81442 3.00236 3.20023 3.33142 3.37110 3.42865 3.51973 3.62836 3.65933 3.83728 3.87515 3.98046 3.99266 4.08251 4.11937 4.22357 4.25829 4.41536 4.50527 4.56477 4.60559 4.63066 4.65713 4.73219 4.77223 4.83807 4.89822 4.95448 5.01128 5.05549 5.11683 5.17314 5.46188 5.52390 5.56047 5.62418 5.70633 6.08365 6.37327 6.37857 7.12798 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.067 4.067 3 Si 0.688 3.312 4 C -0.141 4.141 5 C -0.031 4.031 6 C -0.175 4.175 7 C 0.559 3.441 8 O -0.520 6.520 9 N -0.715 5.715 10 C 0.123 3.877 11 H 0.119 0.881 12 C -0.145 4.145 13 C -0.070 4.070 14 H 0.103 0.897 15 C -0.070 4.070 16 C -0.118 4.118 17 C -0.118 4.118 18 C -0.124 4.124 19 C -0.117 4.117 20 C -0.115 4.115 21 C -0.135 4.135 22 C 0.167 3.833 23 F -0.111 7.111 24 C -0.156 4.156 25 C -0.061 4.061 26 H 0.381 0.619 27 H 0.118 0.882 28 H -0.252 1.252 29 H -0.255 1.255 30 H 0.139 0.861 31 H 0.400 0.600 32 H 0.077 0.923 33 H 0.089 0.911 34 H 0.120 0.880 35 H 0.121 0.879 36 H 0.121 0.879 37 H 0.122 0.878 38 H 0.122 0.878 39 H 0.089 0.911 40 H 0.081 0.919 41 H 0.150 0.850 42 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.253 3.445 2.166 4.652 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.177 4.177 3 Si 0.590 3.410 4 C -0.141 4.141 5 C -0.050 4.050 6 C -0.179 4.179 7 C 0.346 3.654 8 O -0.396 6.396 9 N -0.366 5.366 10 C 0.019 3.981 11 H 0.137 0.863 12 C -0.184 4.184 13 C -0.089 4.089 14 H 0.122 0.878 15 C -0.070 4.070 16 C -0.136 4.136 17 C -0.136 4.136 18 C -0.142 4.142 19 C -0.135 4.135 20 C -0.133 4.133 21 C -0.173 4.173 22 C 0.146 3.854 23 F -0.089 7.089 24 C -0.175 4.175 25 C -0.078 4.078 26 H 0.229 0.771 27 H 0.135 0.865 28 H -0.176 1.176 29 H -0.180 1.180 30 H 0.156 0.844 31 H 0.236 0.764 32 H 0.096 0.904 33 H 0.107 0.893 34 H 0.138 0.862 35 H 0.139 0.861 36 H 0.139 0.861 37 H 0.140 0.860 38 H 0.140 0.860 39 H 0.108 0.892 40 H 0.099 0.901 41 H 0.168 0.832 42 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.374 3.283 2.366 4.274 hybrid contribution 0.056 -0.570 0.448 0.727 sum -1.318 2.713 2.814 4.126 Atomic orbital electron populations 1.86517 1.16787 1.81658 1.49438 1.25045 0.85470 1.10260 0.96967 0.94727 0.81036 0.77562 0.87689 1.20334 1.00644 0.94978 0.98176 1.21013 0.95787 0.93664 0.94543 1.20094 1.04513 0.95333 0.97964 1.18012 0.78679 0.85537 0.83141 1.90871 1.52622 1.68502 1.27592 1.45868 1.52392 1.12702 1.25664 1.22586 0.95328 0.79268 1.00945 0.86307 1.23653 0.96945 0.97198 1.00578 1.21352 0.96881 0.96269 0.94405 0.87849 1.19629 0.98527 0.94552 0.94273 1.20984 1.00516 0.99886 0.92183 1.21168 0.99040 0.96214 0.97171 1.21204 0.99168 0.94895 0.98940 1.21197 0.99798 0.99924 0.92620 1.21090 0.99276 0.95530 0.97448 1.23444 0.97054 0.95919 1.00855 1.17762 0.93607 0.90537 0.83478 1.91634 1.85846 1.82007 1.49367 1.21175 1.03466 0.92938 0.99925 1.21100 0.94692 0.99681 0.92369 0.77112 0.86472 1.17630 1.18008 0.84366 0.76370 0.90398 0.89254 0.86235 0.86056 0.86065 0.85965 0.85995 0.89221 0.90076 0.83230 0.84112 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.24 12.76 -35.23 -0.45 0.79 16 2 C -0.07 0.18 2.82 36.01 0.10 0.28 16 3 Si 0.69 -2.12 29.78 -169.99 -5.06 -7.18 16 4 C -0.14 0.30 5.39 -104.68 -0.56 -0.26 16 5 C -0.03 0.04 9.09 -39.19 -0.36 -0.31 16 6 C -0.17 -0.21 5.88 -104.91 -0.62 -0.83 16 7 C 0.56 1.63 7.77 -12.40 -0.10 1.53 16 8 O -0.52 -3.64 14.96 5.30 0.08 -3.56 16 9 N -0.71 0.18 5.31 -54.01 -0.29 -0.11 16 10 C 0.12 -0.03 4.21 -67.12 -0.28 -0.31 16 11 H 0.12 0.16 7.50 -51.93 -0.39 -0.23 16 12 C -0.15 0.07 7.27 -25.83 -0.19 -0.12 16 13 C -0.07 0.07 3.97 -90.87 -0.36 -0.29 16 14 H 0.10 -0.15 8.09 -51.92 -0.42 -0.57 16 15 C -0.07 -0.02 5.29 -104.63 -0.55 -0.58 16 16 C -0.12 -0.02 8.63 -39.58 -0.34 -0.37 16 17 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 18 C -0.12 -0.08 10.05 -39.58 -0.40 -0.47 16 19 C -0.12 -0.07 10.05 -39.58 -0.40 -0.47 16 20 C -0.12 -0.07 9.71 -39.58 -0.38 -0.45 16 21 C -0.13 0.22 7.30 -25.92 -0.19 0.03 16 22 C 0.17 0.32 7.29 -38.96 -0.28 0.04 16 23 F -0.11 -0.53 15.55 2.25 0.04 -0.50 16 24 C -0.16 0.16 10.01 -39.56 -0.40 -0.24 16 25 C -0.06 0.15 8.66 -39.51 -0.34 -0.19 16 26 H 0.38 -2.25 8.70 45.56 0.40 -1.86 16 27 H 0.12 -0.30 7.96 -51.93 -0.41 -0.71 16 28 H -0.25 -0.13 7.11 56.52 0.40 0.28 16 29 H -0.26 0.21 7.11 56.52 0.40 0.61 16 30 H 0.14 -0.45 6.41 -52.49 -0.34 -0.78 16 31 H 0.40 -1.12 6.74 -40.82 -0.28 -1.40 16 32 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 33 H 0.09 -0.07 6.32 -51.93 -0.33 -0.40 16 34 H 0.12 -0.16 6.66 -52.48 -0.35 -0.51 16 35 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 36 H 0.12 -0.11 8.06 -52.48 -0.42 -0.54 16 37 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 38 H 0.12 -0.10 8.05 -52.49 -0.42 -0.53 16 39 H 0.09 -0.20 7.70 -51.93 -0.40 -0.60 16 40 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 41 H 0.15 -0.44 8.06 -52.49 -0.42 -0.86 16 42 H 0.14 -0.66 4.86 -52.48 -0.25 -0.92 16 LS Contribution 353.52 15.07 5.33 5.33 Total: 0.00 -8.44 353.52 -11.33 -19.77 By element: Atomic # 1 Polarization: -6.14 SS G_CDS: -4.93 Total: -11.07 kcal Atomic # 6 Polarization: 2.58 SS G_CDS: -6.05 Total: -3.47 kcal Atomic # 7 Polarization: 0.18 SS G_CDS: -0.29 Total: -0.11 kcal Atomic # 8 Polarization: -2.41 SS G_CDS: -0.37 Total: -2.78 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.04 Total: -0.50 kcal Atomic # 14 Polarization: -2.12 SS G_CDS: -5.06 Total: -7.18 kcal Total LS contribution 5.33 Total: 5.33 kcal Total: -8.44 -11.33 -19.77 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.239 kcal (2) G-P(sol) polarization free energy of solvation -8.438 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.676 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.331 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.769 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.008 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds