Wall clock time and date at job start Sun Mar 7 2021 08:55:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86302 * 109.47338 * 2 1 4 4 C 1.50702 * 109.47345 * 119.99966 * 2 1 3 5 5 C 1.38238 * 119.99791 * 64.99601 * 4 2 1 6 6 C 1.38234 * 120.00093 * 179.97438 * 5 4 2 7 7 C 1.38241 * 119.99568 * 359.97438 * 6 5 4 8 8 C 1.50701 * 119.99576 * 179.97438 * 7 6 5 9 9 C 1.50703 * 109.47064 * 90.00122 * 8 7 6 10 10 O 1.21278 * 119.99985 * 359.97438 * 9 8 7 11 11 N 1.34777 * 120.00161 * 180.02562 * 9 8 7 12 12 C 1.46496 * 120.00271 * 180.02562 * 11 9 8 13 13 H 1.09001 * 112.84617 * 23.80039 * 12 11 9 14 14 C 1.53784 * 113.61657 * 154.99545 * 12 11 9 15 15 C 1.53783 * 87.07990 * 139.98018 * 14 12 11 16 16 H 1.08993 * 113.61459 * 89.11928 * 15 14 12 17 17 C 1.50701 * 113.61417 * 219.93871 * 15 14 12 18 18 C 1.38234 * 120.00388 * 59.72604 * 17 15 14 19 19 C 1.38233 * 120.00291 * 179.79037 * 18 17 15 20 20 C 1.38236 * 119.99486 * 0.46546 * 19 18 17 21 21 C 1.38230 * 120.00366 * 359.76200 * 20 19 18 22 22 C 1.38232 * 120.00131 * 0.02994 * 21 20 19 23 23 C 1.53779 * 87.08208 * 334.56947 * 15 14 12 24 24 C 1.38233 * 120.00269 * 0.27212 * 7 6 5 25 25 C 1.38234 * 119.99979 * 359.54072 * 24 7 6 26 26 H 0.96704 * 113.99636 * 300.00113 * 1 2 3 27 27 H 1.09003 * 109.47106 * 240.00029 * 2 1 3 28 28 H 1.48499 * 110.00377 * 178.68287 * 3 2 1 29 29 H 1.48500 * 110.00120 * 300.00241 * 3 2 1 30 30 H 1.08004 * 119.99911 * 0.02562 * 5 4 2 31 31 H 1.07995 * 119.99943 * 180.02562 * 6 5 4 32 32 H 1.09002 * 109.47060 * 210.00086 * 8 7 6 33 33 H 1.09001 * 109.47380 * 330.00174 * 8 7 6 34 34 H 0.97005 * 119.99463 * 359.97438 * 11 9 8 35 35 H 1.08994 * 113.61618 * 254.52876 * 14 12 11 36 36 H 1.09007 * 113.60928 * 25.43373 * 14 12 11 37 37 H 1.08003 * 119.99441 * 359.97438 * 18 17 15 38 38 H 1.07995 * 120.00065 * 180.25018 * 19 18 17 39 39 H 1.08009 * 119.99624 * 179.79500 * 20 19 18 40 40 H 1.08007 * 120.00301 * 180.02562 * 21 20 19 41 41 H 1.08004 * 120.00263 * 179.97438 * 22 21 20 42 42 H 1.09008 * 113.61656 * 270.88271 * 23 15 14 43 43 H 1.08998 * 113.61798 * 139.98381 * 23 15 14 44 44 H 1.08003 * 119.99927 * 179.72604 * 24 7 6 45 45 H 1.07998 * 120.00482 * 180.23135 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6847 -2.0602 1.3984 6 6 2.1459 -2.7120 2.5268 7 6 2.8544 -2.0140 3.4870 8 6 3.3567 -2.7245 4.7174 9 6 4.7377 -3.2679 4.4551 10 8 5.2621 -3.0956 3.3752 11 7 5.3896 -3.9461 5.4202 12 6 6.7322 -4.4738 5.1655 13 1 7.2549 -3.9368 4.3739 14 6 7.5719 -4.6630 6.4399 15 6 8.0800 -5.9735 5.8160 16 1 8.9716 -5.8478 5.2019 17 6 8.2050 -7.1041 6.8046 18 6 7.0924 -7.5418 7.4985 19 6 7.2062 -8.5817 8.4021 20 6 8.4346 -9.1774 8.6189 21 6 9.5482 -8.7366 7.9286 22 6 9.4335 -7.6996 7.0218 23 6 6.7732 -6.0028 5.0060 24 6 3.0966 -0.6632 3.3215 25 6 2.6387 -0.0123 2.1913 26 1 -0.3933 0.4417 0.7651 27 1 1.7923 -0.5138 -0.8900 28 1 3.5346 1.7703 0.0321 29 1 1.5615 2.4679 -1.2085 30 1 1.1322 -2.6057 0.6475 31 1 1.9536 -3.7666 2.6577 32 1 3.3943 -2.0239 5.5516 33 1 2.6837 -3.5460 4.9630 34 1 4.9699 -4.0842 6.2839 35 1 8.3492 -3.9096 6.5664 36 1 6.9736 -4.8106 7.3390 37 1 6.1336 -7.0732 7.3323 38 1 6.3362 -8.9263 8.9411 39 1 8.5242 -9.9877 9.3274 40 1 10.5078 -9.2024 8.0978 41 1 10.3036 -7.3549 6.4827 42 1 5.9565 -6.5167 5.5131 43 1 6.9056 -6.3309 3.9751 44 1 3.6463 -0.1170 4.0739 45 1 2.8312 1.0423 2.0601 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:55:39 Heat of formation + Delta-G solvation = 5.575900 kcal Electronic energy + Delta-G solvation = -25564.193522 eV Core-core repulsion = 21899.338319 eV Total energy + Delta-G solvation = -3664.855203 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.151 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.57371 -40.81518 -39.96132 -38.70242 -37.55387 -34.70176 -33.97158 -31.93355 -31.89574 -31.69001 -29.73587 -26.80702 -26.41530 -25.29754 -23.77558 -23.64384 -22.76495 -21.91450 -21.37529 -20.36779 -18.41931 -18.25365 -18.03652 -17.25128 -16.86521 -16.69041 -16.42515 -16.23368 -15.99104 -15.79265 -15.53921 -15.30193 -14.95071 -14.64264 -14.46627 -14.37040 -14.24667 -14.03215 -13.93883 -13.58370 -13.37108 -13.20623 -12.97976 -12.87122 -12.56409 -12.37404 -12.16919 -11.92708 -11.86190 -11.73767 -11.65930 -11.49673 -10.83209 -10.37941 -10.06012 -9.85081 -9.82264 -9.59060 -9.57488 -4.99878 0.28198 0.39667 0.46900 0.50647 1.34473 1.64338 1.69346 2.02463 2.13342 2.79840 2.81776 3.38244 3.49637 3.59496 3.60390 3.65547 3.77948 3.82022 3.88562 3.92851 3.98756 4.05547 4.06983 4.12125 4.21037 4.24781 4.38660 4.49431 4.50004 4.55272 4.56534 4.59390 4.66182 4.72162 4.72920 4.88927 4.93679 5.01644 5.05040 5.10528 5.10910 5.18177 5.41364 5.50479 5.54446 5.58826 5.60854 5.61999 5.69108 6.03911 6.06759 6.46220 6.61233 7.23344 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.068 4.068 3 Si 0.686 3.314 4 C -0.119 4.119 5 C -0.091 4.091 6 C -0.104 4.104 7 C -0.063 4.063 8 C -0.104 4.104 9 C 0.515 3.485 10 O -0.527 6.527 11 N -0.723 5.723 12 C 0.123 3.877 13 H 0.116 0.884 14 C -0.135 4.135 15 C -0.071 4.071 16 H 0.102 0.898 17 C -0.070 4.070 18 C -0.118 4.118 19 C -0.118 4.118 20 C -0.124 4.124 21 C -0.117 4.117 22 C -0.116 4.116 23 C -0.145 4.145 24 C -0.100 4.100 25 C -0.114 4.114 26 H 0.378 0.622 27 H 0.113 0.887 28 H -0.258 1.258 29 H -0.255 1.255 30 H 0.125 0.875 31 H 0.122 0.878 32 H 0.105 0.895 33 H 0.105 0.895 34 H 0.401 0.599 35 H 0.078 0.922 36 H 0.089 0.911 37 H 0.120 0.880 38 H 0.122 0.878 39 H 0.121 0.879 40 H 0.122 0.878 41 H 0.122 0.878 42 H 0.089 0.911 43 H 0.075 0.925 44 H 0.124 0.876 45 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.017 -0.056 6.675 6.752 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.179 4.179 3 Si 0.588 3.412 4 C -0.119 4.119 5 C -0.109 4.109 6 C -0.122 4.122 7 C -0.063 4.063 8 C -0.144 4.144 9 C 0.301 3.699 10 O -0.402 6.402 11 N -0.375 5.375 12 C 0.018 3.982 13 H 0.134 0.866 14 C -0.173 4.173 15 C -0.090 4.090 16 H 0.120 0.880 17 C -0.070 4.070 18 C -0.136 4.136 19 C -0.136 4.136 20 C -0.142 4.142 21 C -0.135 4.135 22 C -0.134 4.134 23 C -0.183 4.183 24 C -0.118 4.118 25 C -0.131 4.131 26 H 0.226 0.774 27 H 0.130 0.870 28 H -0.183 1.183 29 H -0.180 1.180 30 H 0.143 0.857 31 H 0.140 0.860 32 H 0.124 0.876 33 H 0.123 0.877 34 H 0.236 0.764 35 H 0.097 0.903 36 H 0.108 0.892 37 H 0.138 0.862 38 H 0.140 0.860 39 H 0.139 0.861 40 H 0.140 0.860 41 H 0.140 0.860 42 H 0.107 0.893 43 H 0.094 0.906 44 H 0.142 0.858 45 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -0.064 0.378 4.887 4.902 hybrid contribution 0.035 -0.902 0.362 0.972 sum -0.029 -0.524 5.249 5.275 Atomic orbital electron populations 1.86505 1.17135 1.81713 1.49195 1.25053 0.85167 1.10102 0.97591 0.94834 0.81202 0.78090 0.87071 1.20314 0.99825 0.95093 0.96710 1.20962 0.98722 0.93754 0.97437 1.21015 0.97788 0.99596 0.93776 1.19267 0.97943 0.93747 0.95376 1.20708 0.94201 1.01650 0.97850 1.20623 0.87424 0.77589 0.84285 1.90757 1.68256 1.57175 1.24048 1.46010 1.17757 1.57028 1.16668 1.22521 0.82936 0.93961 0.98807 0.86570 1.23452 0.99528 0.97014 0.97344 1.21329 0.98781 0.92900 0.95998 0.87977 1.19639 0.93500 0.96706 0.97132 1.20978 0.98213 0.97488 0.96898 1.21168 0.97730 0.96418 0.98270 1.21204 0.92962 1.00157 0.99894 1.21196 0.98820 0.96994 0.96518 1.21093 0.97103 0.96571 0.98632 1.23610 0.97164 0.96365 1.01188 1.20908 0.99194 0.93956 0.97766 1.20917 0.98819 0.99125 0.94247 0.77442 0.86995 1.18273 1.18019 0.85690 0.86020 0.87631 0.87706 0.76438 0.90300 0.89244 0.86200 0.86031 0.86060 0.85979 0.86036 0.89253 0.90617 0.85767 0.85622 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.58 12.83 -35.23 -0.45 -1.03 16 2 C -0.07 -0.07 2.80 36.01 0.10 0.03 16 3 Si 0.69 0.00 29.80 -169.99 -5.07 -5.07 16 4 C -0.12 -0.18 5.35 -104.62 -0.56 -0.74 16 5 C -0.09 -0.18 9.69 -39.58 -0.38 -0.56 16 6 C -0.10 -0.15 9.70 -39.58 -0.38 -0.53 16 7 C -0.06 -0.05 4.37 -104.62 -0.46 -0.51 16 8 C -0.10 0.19 5.83 -29.03 -0.17 0.02 16 9 C 0.51 0.41 7.82 -10.98 -0.09 0.33 16 10 O -0.53 -2.93 15.63 5.56 0.09 -2.84 16 11 N -0.72 1.24 5.35 -53.02 -0.28 0.96 16 12 C 0.12 -0.11 4.24 -67.12 -0.28 -0.39 16 13 H 0.12 0.13 7.47 -51.93 -0.39 -0.26 16 14 C -0.14 0.28 7.30 -25.92 -0.19 0.09 16 15 C -0.07 0.09 3.98 -90.96 -0.36 -0.27 16 16 H 0.10 -0.15 8.09 -51.93 -0.42 -0.57 16 17 C -0.07 0.00 5.29 -104.62 -0.55 -0.56 16 18 C -0.12 0.03 8.60 -39.58 -0.34 -0.31 16 19 C -0.12 0.00 10.05 -39.58 -0.40 -0.40 16 20 C -0.12 -0.04 10.05 -39.58 -0.40 -0.44 16 21 C -0.12 -0.05 10.05 -39.59 -0.40 -0.44 16 22 C -0.12 -0.04 9.71 -39.58 -0.38 -0.43 16 23 C -0.14 0.14 7.25 -25.92 -0.19 -0.05 16 24 C -0.10 -0.08 9.70 -39.58 -0.38 -0.46 16 25 C -0.11 -0.09 8.67 -39.58 -0.34 -0.44 16 26 H 0.38 -1.11 8.70 45.56 0.40 -0.71 16 27 H 0.11 0.18 7.96 -51.93 -0.41 -0.23 16 28 H -0.26 -0.70 7.11 56.52 0.40 -0.30 16 29 H -0.26 -0.79 7.11 56.52 0.40 -0.39 16 30 H 0.13 0.17 8.06 -52.48 -0.42 -0.25 16 31 H 0.12 0.00 8.06 -52.49 -0.42 -0.42 16 32 H 0.11 -0.43 8.08 -51.93 -0.42 -0.85 16 33 H 0.10 -0.40 8.09 -51.93 -0.42 -0.82 16 34 H 0.40 -1.83 8.73 -40.82 -0.36 -2.19 16 35 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 36 H 0.09 -0.25 7.69 -51.92 -0.40 -0.64 16 37 H 0.12 -0.23 6.68 -52.48 -0.35 -0.58 16 38 H 0.12 -0.20 8.06 -52.49 -0.42 -0.62 16 39 H 0.12 -0.15 8.06 -52.48 -0.42 -0.57 16 40 H 0.12 -0.14 8.06 -52.48 -0.42 -0.56 16 41 H 0.12 -0.12 8.05 -52.48 -0.42 -0.54 16 42 H 0.09 -0.13 6.34 -51.92 -0.33 -0.46 16 43 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 44 H 0.12 -0.13 8.06 -52.48 -0.42 -0.55 16 45 H 0.13 -0.15 4.91 -52.49 -0.26 -0.40 16 LS Contribution 373.71 15.07 5.63 5.63 Total: 0.00 -8.75 373.71 -12.61 -21.35 By element: Atomic # 1 Polarization: -6.57 SS G_CDS: -6.36 Total: -12.93 kcal Atomic # 6 Polarization: 0.10 SS G_CDS: -6.16 Total: -6.06 kcal Atomic # 7 Polarization: 1.24 SS G_CDS: -0.28 Total: 0.96 kcal Atomic # 8 Polarization: -3.51 SS G_CDS: -0.37 Total: -3.88 kcal Atomic # 14 Polarization: 0.00 SS G_CDS: -5.07 Total: -5.07 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -8.75 -12.61 -21.35 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.928 kcal (2) G-P(sol) polarization free energy of solvation -8.747 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.181 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.605 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.352 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.576 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds