Wall clock time and date at job start Sun Mar 7 2021 08:56:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46858 * 2 1 4 4 C 1.50699 * 109.46603 * 119.99410 * 2 1 3 5 5 C 1.37940 * 119.92390 * 64.72674 * 4 2 1 6 6 C 1.39602 * 119.87435 * 179.76907 * 5 4 2 7 7 C 1.47840 * 120.13964 * 180.25362 * 6 5 4 8 8 O 1.21554 * 120.00215 * 0.23400 * 7 6 5 9 9 N 1.34784 * 120.00258 * 180.22825 * 7 6 5 10 10 C 1.46495 * 120.00396 * 179.97438 * 9 7 6 11 11 H 1.09007 * 112.85144 * 336.20319 * 10 9 7 12 12 C 1.53784 * 113.61030 * 107.50243 * 10 9 7 13 13 C 1.53780 * 87.07888 * 139.98336 * 12 10 9 14 14 H 1.09008 * 113.69165 * 89.12797 * 13 12 10 15 15 C 1.50700 * 113.61860 * 220.01858 * 13 12 10 16 16 C 1.38237 * 119.99650 * 37.21921 * 15 13 12 17 17 C 1.38233 * 120.00001 * 179.76778 * 16 15 13 18 18 C 1.38234 * 119.99657 * 0.48769 * 17 16 15 19 19 C 1.38238 * 120.00520 * 359.79335 * 18 17 16 20 20 C 1.38231 * 119.99611 * 359.95116 * 19 18 17 21 21 C 1.53778 * 113.61806 * 205.00175 * 10 9 7 22 22 C 1.39541 * 119.72114 * 0.48399 * 6 5 4 23 23 C 1.38076 * 119.84199 * 359.76832 * 22 6 5 24 24 Br 1.89103 * 119.93998 * 180.02562 * 23 22 6 25 25 C 1.38373 * 119.92087 * 245.00529 * 4 2 1 26 26 H 0.96697 * 114.00527 * 300.00583 * 1 2 3 27 27 H 1.08996 * 109.47455 * 239.99290 * 2 1 3 28 28 H 1.48506 * 109.99834 * 178.67912 * 3 2 1 29 29 H 1.48502 * 110.00011 * 299.99177 * 3 2 1 30 30 H 1.08005 * 120.06121 * 359.97438 * 5 4 2 31 31 H 0.97005 * 119.99611 * 0.02562 * 9 7 6 32 32 H 1.09005 * 113.61494 * 254.52910 * 12 10 9 33 33 H 1.08996 * 113.61754 * 25.43587 * 12 10 9 34 34 H 1.07999 * 119.99680 * 0.02562 * 16 15 13 35 35 H 1.07995 * 120.00348 * 180.25951 * 17 16 15 36 36 H 1.08005 * 120.00268 * 179.76842 * 18 17 16 37 37 H 1.07998 * 120.00449 * 179.97438 * 19 18 17 38 38 H 1.08004 * 119.99962 * 180.02562 * 20 19 18 39 39 H 1.08996 * 113.60992 * 334.56870 * 21 10 9 40 40 H 1.09002 * 113.61620 * 105.47175 * 21 10 9 41 41 H 1.08001 * 120.08315 * 179.79004 * 22 6 5 42 42 H 1.07998 * 119.85897 * 359.97438 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 1.6794 -2.0560 1.3993 6 6 2.1492 -2.7140 2.5373 7 6 1.8874 -4.1573 2.7215 8 8 1.2655 -4.7746 1.8790 9 7 2.3384 -4.7889 3.8235 10 6 2.0785 -6.2190 4.0062 11 1 1.2079 -6.5656 3.4493 12 6 3.3243 -7.1005 3.8168 13 6 2.8232 -7.9286 5.0118 14 1 2.1570 -8.7444 4.7308 15 6 3.9217 -8.3658 5.9463 16 6 4.9825 -7.5195 6.2098 17 6 5.9877 -7.9186 7.0708 18 6 5.9371 -9.1678 7.6604 19 6 4.8792 -10.0164 7.3925 20 6 3.8714 -9.6153 6.5356 21 6 2.0847 -6.6631 5.4785 22 6 2.8629 -2.0026 3.5027 23 6 3.1039 -0.6548 3.3245 24 35 4.0713 0.3117 4.6305 25 6 2.6391 -0.0098 2.1913 26 1 -0.3934 0.4417 0.7649 27 1 1.7924 -0.5139 -0.8899 28 1 3.5346 1.7703 0.0322 29 1 1.5616 2.4678 -1.2086 30 1 1.1225 -2.6002 0.6508 31 1 2.8344 -4.2962 4.4960 32 1 3.3306 -7.6511 2.8760 33 1 4.2617 -6.5789 4.0094 34 1 5.0238 -6.5450 5.7462 35 1 6.8143 -7.2558 7.2799 36 1 6.7243 -9.4811 8.3302 37 1 4.8400 -10.9926 7.8528 38 1 3.0447 -10.2781 6.3266 39 1 2.6833 -6.0218 6.1254 40 1 1.0904 -6.8604 5.8793 41 1 3.2261 -2.5051 4.3870 42 1 2.8300 1.0446 2.0563 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:56:01 Heat of formation + Delta-G solvation = 16.628891 kcal Electronic energy + Delta-G solvation = -26031.771016 eV Core-core repulsion = 22183.114723 eV Total energy + Delta-G solvation = -3848.656294 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.046 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.80617 -41.03436 -39.90054 -38.67999 -37.72135 -34.97385 -33.67308 -33.07414 -31.88341 -31.56105 -30.52889 -27.15236 -26.83431 -26.61913 -24.84649 -23.62908 -22.87726 -22.42183 -21.52321 -20.46267 -19.10354 -18.36991 -17.81325 -17.65532 -17.22381 -16.75423 -16.47231 -16.35637 -16.04239 -15.90156 -15.62875 -15.34106 -15.07915 -14.97040 -14.43661 -14.31300 -14.30421 -14.10100 -13.98938 -13.60132 -13.37604 -13.17932 -13.03728 -12.62744 -12.39029 -12.23738 -12.01083 -11.99031 -11.88637 -11.75687 -11.53990 -11.49809 -11.05337 -10.61704 -10.35850 -10.12522 -9.97164 -9.84940 -9.59102 -5.16438 -0.55187 -0.22543 0.35194 0.39595 0.47090 1.12229 1.49951 1.55841 1.85654 1.97490 2.45603 2.79821 3.17612 3.26162 3.35632 3.41789 3.58320 3.62064 3.71877 3.79159 3.83025 3.91217 3.96465 4.06367 4.09361 4.15548 4.19991 4.21769 4.42203 4.48361 4.54540 4.57663 4.63550 4.67861 4.71678 4.85768 4.88386 4.91987 5.00798 5.04322 5.09661 5.14495 5.32260 5.43878 5.54519 5.61062 5.68669 6.06833 6.32499 6.43874 7.05552 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.067 4.067 3 Si 0.682 3.318 4 C -0.119 4.119 5 C -0.017 4.017 6 C -0.128 4.128 7 C 0.562 3.438 8 O -0.526 6.526 9 N -0.715 5.715 10 C 0.122 3.878 11 H 0.120 0.880 12 C -0.145 4.145 13 C -0.070 4.070 14 H 0.104 0.896 15 C -0.070 4.070 16 C -0.118 4.118 17 C -0.118 4.118 18 C -0.124 4.124 19 C -0.117 4.117 20 C -0.115 4.115 21 C -0.135 4.135 22 C -0.054 4.054 23 C -0.095 4.095 24 Br -0.032 7.032 25 C -0.063 4.063 26 H 0.381 0.619 27 H 0.121 0.879 28 H -0.253 1.253 29 H -0.248 1.248 30 H 0.148 0.852 31 H 0.400 0.600 32 H 0.077 0.923 33 H 0.090 0.910 34 H 0.120 0.880 35 H 0.122 0.878 36 H 0.121 0.879 37 H 0.122 0.878 38 H 0.122 0.878 39 H 0.089 0.911 40 H 0.081 0.919 41 H 0.138 0.862 42 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.949 1.623 4.365 4.752 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.178 4.178 3 Si 0.583 3.417 4 C -0.121 4.121 5 C -0.036 4.036 6 C -0.132 4.132 7 C 0.349 3.651 8 O -0.403 6.403 9 N -0.366 5.366 10 C 0.018 3.982 11 H 0.138 0.862 12 C -0.184 4.184 13 C -0.089 4.089 14 H 0.122 0.878 15 C -0.070 4.070 16 C -0.136 4.136 17 C -0.136 4.136 18 C -0.142 4.142 19 C -0.135 4.135 20 C -0.133 4.133 21 C -0.174 4.174 22 C -0.074 4.074 23 C -0.174 4.174 24 Br 0.054 6.946 25 C -0.082 4.082 26 H 0.228 0.772 27 H 0.138 0.862 28 H -0.177 1.177 29 H -0.172 1.172 30 H 0.166 0.834 31 H 0.236 0.764 32 H 0.096 0.904 33 H 0.108 0.892 34 H 0.138 0.862 35 H 0.140 0.860 36 H 0.139 0.861 37 H 0.140 0.860 38 H 0.140 0.860 39 H 0.108 0.892 40 H 0.099 0.901 41 H 0.156 0.844 42 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 1.429 1.824 3.267 4.005 hybrid contribution 0.303 -0.653 0.053 0.722 sum 1.732 1.171 3.320 3.923 Atomic orbital electron populations 1.86554 1.16539 1.81634 1.49261 1.25087 0.85651 1.10166 0.96881 0.94884 0.81373 0.77600 0.87881 1.20383 0.99803 0.94620 0.97260 1.21309 0.93601 0.93115 0.95610 1.19981 1.02606 0.93831 0.96770 1.18141 0.78834 0.86276 0.81841 1.90824 1.39879 1.67174 1.42387 1.45907 1.57436 1.10541 1.22720 1.22611 0.99390 0.79034 0.97194 0.86180 1.23626 0.98467 0.97576 0.98695 1.21325 0.95797 0.96929 0.94855 0.87826 1.19629 0.95494 0.94320 0.97582 1.20982 0.94262 0.99639 0.98712 1.21168 0.98729 0.96558 0.97115 1.21206 0.98533 0.94371 1.00075 1.21197 0.94377 0.99780 0.98170 1.21090 0.98979 0.95869 0.97406 1.23461 1.01731 0.96494 0.95672 1.21279 0.95529 0.92339 0.98278 1.21650 1.04022 0.95100 0.96631 1.96849 1.72357 1.73566 1.51877 1.21201 0.95348 0.99842 0.91827 0.77195 0.86212 1.17734 1.17244 0.83409 0.76388 0.90394 0.89187 0.86219 0.86033 0.86063 0.85972 0.86006 0.89216 0.90071 0.84413 0.84082 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.21 12.83 -35.23 -0.45 -0.24 16 2 C -0.07 0.07 2.80 36.01 0.10 0.17 16 3 Si 0.68 -1.22 29.79 -169.99 -5.06 -6.29 16 4 C -0.12 0.08 5.35 -104.68 -0.56 -0.48 16 5 C -0.02 -0.01 9.22 -39.18 -0.36 -0.37 16 6 C -0.13 -0.04 5.87 -104.97 -0.62 -0.66 16 7 C 0.56 0.95 7.77 -12.33 -0.10 0.86 16 8 O -0.53 -2.88 15.95 5.32 0.08 -2.80 16 9 N -0.71 0.79 5.31 -53.96 -0.29 0.50 16 10 C 0.12 -0.12 4.24 -67.12 -0.28 -0.40 16 11 H 0.12 0.06 7.46 -51.93 -0.39 -0.32 16 12 C -0.15 0.16 7.25 -25.92 -0.19 -0.02 16 13 C -0.07 0.10 3.98 -90.96 -0.36 -0.26 16 14 H 0.10 -0.20 8.09 -51.92 -0.42 -0.62 16 15 C -0.07 0.01 5.29 -104.62 -0.55 -0.55 16 16 C -0.12 0.03 8.62 -39.58 -0.34 -0.31 16 17 C -0.12 -0.01 10.05 -39.58 -0.40 -0.41 16 18 C -0.12 -0.04 10.05 -39.58 -0.40 -0.43 16 19 C -0.12 -0.04 10.05 -39.58 -0.40 -0.44 16 20 C -0.12 -0.03 9.71 -39.58 -0.38 -0.41 16 21 C -0.14 0.30 7.30 -25.92 -0.19 0.11 16 22 C -0.05 0.07 9.28 -39.15 -0.36 -0.29 16 23 C -0.09 0.09 6.22 -39.57 -0.25 -0.15 16 24 Br -0.03 0.03 33.69 -68.01 -2.29 -2.26 16 25 C -0.06 0.08 8.40 -39.46 -0.33 -0.25 16 26 H 0.38 -1.66 8.70 45.56 0.40 -1.26 16 27 H 0.12 -0.08 7.96 -51.93 -0.41 -0.49 16 28 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 29 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 30 H 0.15 0.25 7.65 -52.48 -0.40 -0.15 16 31 H 0.40 -1.43 6.76 -40.82 -0.28 -1.71 16 32 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.09 -0.13 6.30 -51.93 -0.33 -0.46 16 34 H 0.12 -0.22 6.64 -52.49 -0.35 -0.57 16 35 H 0.12 -0.18 8.06 -52.49 -0.42 -0.61 16 36 H 0.12 -0.15 8.06 -52.48 -0.42 -0.57 16 37 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 38 H 0.12 -0.14 8.06 -52.48 -0.42 -0.57 16 39 H 0.09 -0.25 7.71 -51.93 -0.40 -0.65 16 40 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 41 H 0.14 -0.51 6.40 -52.49 -0.34 -0.84 16 42 H 0.14 -0.41 4.89 -52.49 -0.26 -0.67 16 LS Contribution 370.31 15.07 5.58 5.58 Total: 0.00 -7.28 370.31 -13.30 -20.58 By element: Atomic # 1 Polarization: -5.87 SS G_CDS: -4.91 Total: -10.78 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: -5.97 Total: -4.30 kcal Atomic # 7 Polarization: 0.79 SS G_CDS: -0.29 Total: 0.50 kcal Atomic # 8 Polarization: -2.67 SS G_CDS: -0.37 Total: -3.04 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.06 Total: -6.29 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -2.29 Total: -2.26 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -7.28 -13.30 -20.58 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.209 kcal (2) G-P(sol) polarization free energy of solvation -7.276 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.932 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.303 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.580 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.629 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds