Wall clock time and date at job start Sun Mar 7 2021 08:56:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86297 * 109.47275 * 2 1 4 4 C 1.50700 * 109.46758 * 120.00219 * 2 1 3 5 5 C 1.38183 * 119.84403 * 15.00055 * 4 2 1 6 6 C 1.38318 * 120.14004 * 179.97438 * 5 4 2 7 7 F 1.35106 * 120.07657 * 179.97438 * 6 5 4 8 8 C 1.39798 * 119.83634 * 359.97438 * 6 5 4 9 9 C 1.47696 * 120.15478 * 180.02562 * 8 6 5 10 10 O 1.21565 * 120.00202 * 359.97438 * 9 8 6 11 11 N 1.34783 * 120.00179 * 180.02562 * 9 8 6 12 12 C 1.46494 * 120.00175 * 179.97438 * 11 9 8 13 13 H 1.08999 * 112.85152 * 23.80502 * 12 11 9 14 14 C 1.53785 * 113.61408 * 154.99511 * 12 11 9 15 15 C 1.53781 * 87.07878 * 139.98321 * 14 12 11 16 16 H 1.08996 * 113.61423 * 89.20757 * 15 14 12 17 17 C 1.50706 * 113.61083 * 220.01993 * 15 14 12 18 18 C 1.38229 * 120.00050 * 59.73246 * 17 15 14 19 19 C 1.38239 * 120.00049 * 179.76556 * 18 17 15 20 20 C 1.38233 * 119.99922 * 0.50241 * 19 18 17 21 21 C 1.38237 * 119.99498 * 359.74888 * 20 19 18 22 22 C 1.38225 * 120.00402 * 359.97438 * 21 20 19 23 23 C 1.53775 * 87.08212 * 334.56829 * 15 14 12 24 24 C 1.39655 * 119.69248 * 0.27261 * 8 6 5 25 25 C 1.38072 * 119.84519 * 359.47130 * 24 8 6 26 26 F 1.35100 * 119.91507 * 180.27473 * 25 24 8 27 27 H 0.96699 * 114.00543 * 299.99859 * 1 2 3 28 28 H 1.08998 * 109.47268 * 240.00109 * 2 1 3 29 29 H 1.48495 * 110.00169 * 178.67883 * 3 2 1 30 30 H 1.48495 * 110.00032 * 300.00168 * 3 2 1 31 31 H 1.07995 * 119.93059 * 359.97438 * 5 4 2 32 32 H 0.97004 * 119.99478 * 359.97438 * 11 9 8 33 33 H 1.09003 * 113.61224 * 25.43633 * 14 12 11 34 34 H 1.08996 * 113.61709 * 254.53628 * 14 12 11 35 35 H 1.08008 * 120.00421 * 359.97438 * 18 17 15 36 36 H 1.07997 * 120.00142 * 180.23042 * 19 18 17 37 37 H 1.07993 * 120.00292 * 179.72767 * 20 19 18 38 38 H 1.08005 * 119.99496 * 179.97438 * 21 20 19 39 39 H 1.08010 * 120.00198 * 179.97438 * 22 21 20 40 40 H 1.09007 * 113.61519 * 139.98052 * 23 15 14 41 41 H 1.08996 * 113.61809 * 270.88411 * 23 15 14 42 42 H 1.07993 * 120.07643 * 179.70281 * 24 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7105 1.2305 5 6 1.0689 -1.4963 1.9709 6 6 1.5235 -2.1515 3.1011 7 9 0.6790 -2.9191 3.8244 8 6 2.8587 -2.0176 3.4929 9 6 3.3517 -2.7146 4.6981 10 8 2.5958 -3.4063 5.3522 11 7 4.6396 -2.5829 5.0733 12 6 5.1285 -3.2738 6.2690 13 1 4.5317 -4.1489 6.5260 14 6 6.6421 -3.5450 6.2482 15 6 6.6492 -3.1751 7.7409 16 1 6.4698 -4.0232 8.4017 17 6 7.8438 -2.3542 8.1536 18 6 8.0754 -1.1258 7.5637 19 6 9.1684 -0.3706 7.9458 20 6 10.0356 -0.8486 8.9103 21 6 9.8069 -2.0795 9.4964 22 6 8.7107 -2.8320 9.1185 23 6 5.3926 -2.3352 7.4582 24 6 3.7230 -1.2176 2.7423 25 6 3.2568 -0.5735 1.6135 26 9 4.0931 0.1963 0.8832 27 1 -0.3934 0.4417 0.7650 28 1 1.7923 -0.5138 -0.8900 29 1 3.5346 1.7702 0.0322 30 1 1.5615 2.4678 -1.2084 31 1 0.0378 -1.5990 1.6667 32 1 5.2427 -2.0306 4.5516 33 1 7.2018 -2.8490 5.6233 34 1 6.8963 -4.5871 6.0553 35 1 7.4005 -0.7543 6.8067 36 1 9.3473 0.5909 7.4876 37 1 10.8920 -0.2607 9.2057 38 1 10.4847 -2.4532 10.2497 39 1 8.5322 -3.7939 9.5762 40 1 4.6380 -2.4007 8.2421 41 1 5.6106 -1.3086 7.1640 42 1 4.7544 -1.1059 3.0421 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:56:10 Heat of formation + Delta-G solvation = -61.645086 kcal Electronic energy + Delta-G solvation = -29131.651596 eV Core-core repulsion = 24680.511139 eV Total energy + Delta-G solvation = -4451.140456 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.117 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -50.48942 -49.96239 -41.70340 -40.82933 -39.89598 -38.72931 -37.73950 -34.96400 -33.11510 -31.89820 -31.62083 -31.45402 -28.16969 -26.84061 -26.09674 -24.29002 -23.96780 -23.59369 -22.47956 -21.74783 -20.65361 -19.48252 -19.15921 -18.57764 -18.20585 -17.80714 -17.53728 -17.27026 -16.88131 -16.66761 -16.49831 -16.10987 -15.97876 -15.86557 -15.77384 -15.72726 -15.32079 -15.22228 -14.58775 -14.37244 -14.24200 -14.16249 -13.97946 -13.74790 -13.61320 -13.34041 -13.19655 -12.98527 -12.64517 -12.58999 -12.38639 -11.90389 -11.77267 -11.55601 -11.51224 -11.08580 -10.99280 -10.33427 -10.17579 -9.85879 -9.75175 -9.59951 -5.13384 -0.80996 -0.35506 0.38667 0.46166 1.03953 1.46923 1.55902 1.86193 1.91633 2.28459 2.73169 2.77807 2.78853 3.02085 3.08461 3.31965 3.36209 3.46888 3.58767 3.61531 3.73086 3.82003 3.95458 4.04538 4.06666 4.08919 4.19985 4.24279 4.31333 4.46144 4.53309 4.54575 4.56778 4.64413 4.67333 4.69304 4.71082 4.85056 4.91611 5.01479 5.08392 5.13028 5.35051 5.41177 5.53575 5.60171 5.67649 6.05913 6.26305 6.27490 7.01673 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.072 4.072 3 Si 0.688 3.312 4 C -0.091 4.091 5 C -0.125 4.125 6 C 0.162 3.838 7 F -0.105 7.105 8 C -0.151 4.151 9 C 0.561 3.439 10 O -0.514 6.514 11 N -0.714 5.714 12 C 0.123 3.877 13 H 0.121 0.879 14 C -0.136 4.136 15 C -0.070 4.070 16 H 0.104 0.896 17 C -0.070 4.070 18 C -0.118 4.118 19 C -0.118 4.118 20 C -0.124 4.124 21 C -0.117 4.117 22 C -0.115 4.115 23 C -0.144 4.144 24 C -0.085 4.085 25 C 0.074 3.926 26 F -0.118 7.118 27 H 0.383 0.617 28 H 0.130 0.870 29 H -0.226 1.226 30 H -0.256 1.256 31 H 0.163 0.837 32 H 0.400 0.600 33 H 0.089 0.911 34 H 0.080 0.920 35 H 0.120 0.880 36 H 0.122 0.878 37 H 0.121 0.879 38 H 0.122 0.878 39 H 0.122 0.878 40 H 0.078 0.922 41 H 0.090 0.910 42 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.765 3.165 0.598 4.245 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.181 4.181 3 Si 0.586 3.414 4 C -0.092 4.092 5 C -0.144 4.144 6 C 0.141 3.859 7 F -0.083 7.083 8 C -0.155 4.155 9 C 0.347 3.653 10 O -0.390 6.390 11 N -0.365 5.365 12 C 0.018 3.982 13 H 0.139 0.861 14 C -0.174 4.174 15 C -0.089 4.089 16 H 0.122 0.878 17 C -0.070 4.070 18 C -0.136 4.136 19 C -0.136 4.136 20 C -0.142 4.142 21 C -0.135 4.135 22 C -0.133 4.133 23 C -0.183 4.183 24 C -0.104 4.104 25 C 0.055 3.945 26 F -0.097 7.097 27 H 0.231 0.769 28 H 0.147 0.853 29 H -0.149 1.149 30 H -0.181 1.181 31 H 0.181 0.819 32 H 0.236 0.764 33 H 0.108 0.892 34 H 0.099 0.901 35 H 0.138 0.862 36 H 0.140 0.860 37 H 0.139 0.861 38 H 0.140 0.860 39 H 0.140 0.860 40 H 0.097 0.903 41 H 0.108 0.892 42 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 2.781 2.920 0.101 4.034 hybrid contribution 0.481 -0.394 -0.403 0.741 sum 3.261 2.526 -0.302 4.136 Atomic orbital electron populations 1.86531 1.16437 1.81406 1.49611 1.25155 0.85799 1.10707 0.96447 0.95142 0.81921 0.75791 0.88532 1.20449 0.92180 0.98152 0.98467 1.20856 1.02486 0.97331 0.93709 1.17632 0.86629 0.91223 0.90388 1.91656 1.69139 1.71701 1.75808 1.19870 0.93452 1.03306 0.98915 1.17878 0.82535 0.81055 0.83793 1.90887 1.55317 1.38687 1.54065 1.45865 1.10477 1.51050 1.29148 1.22620 0.94693 0.96657 0.84208 0.86136 1.23468 0.94882 1.03078 0.95964 1.21324 0.92724 0.98331 0.96529 0.87808 1.19628 0.95933 0.94892 0.96574 1.20977 0.97861 0.94488 1.00277 1.21170 0.94922 0.99820 0.97672 1.21206 0.99593 0.96329 0.97063 1.21199 0.97609 0.94882 0.99833 1.21091 0.94823 0.99962 0.97466 1.23622 0.97136 0.99204 0.98337 1.21098 1.00546 0.95473 0.93317 1.17215 0.87982 0.96481 0.92828 1.91602 1.70825 1.71621 1.75606 0.76923 0.85289 1.14942 1.18107 0.81907 0.76415 0.89225 0.90083 0.86214 0.86028 0.86058 0.85969 0.85998 0.90322 0.89152 0.83202 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.93 11.63 -35.23 -0.41 0.52 16 2 C -0.07 0.13 2.96 36.01 0.11 0.24 16 3 Si 0.69 -1.37 30.81 -169.99 -5.24 -6.61 16 4 C -0.09 0.14 5.14 -104.49 -0.54 -0.40 16 5 C -0.13 0.14 9.20 -39.57 -0.36 -0.23 16 6 C 0.16 0.17 7.28 -38.97 -0.28 -0.11 16 7 F -0.11 -0.39 15.55 2.25 0.04 -0.36 16 8 C -0.15 -0.03 5.88 -104.92 -0.62 -0.65 16 9 C 0.56 0.99 7.77 -12.39 -0.10 0.89 16 10 O -0.51 -3.01 14.94 5.31 0.08 -2.93 16 11 N -0.71 0.96 5.31 -54.01 -0.29 0.68 16 12 C 0.12 -0.14 4.24 -67.12 -0.28 -0.43 16 13 H 0.12 0.06 7.46 -51.93 -0.39 -0.33 16 14 C -0.14 0.32 7.30 -25.92 -0.19 0.13 16 15 C -0.07 0.12 3.98 -90.96 -0.36 -0.25 16 16 H 0.10 -0.21 8.09 -51.93 -0.42 -0.63 16 17 C -0.07 0.02 5.29 -104.62 -0.55 -0.53 16 18 C -0.12 0.06 8.60 -39.58 -0.34 -0.28 16 19 C -0.12 0.02 10.05 -39.58 -0.40 -0.38 16 20 C -0.12 -0.02 10.05 -39.58 -0.40 -0.42 16 21 C -0.12 -0.02 10.05 -39.59 -0.40 -0.42 16 22 C -0.12 -0.01 9.71 -39.59 -0.38 -0.40 16 23 C -0.14 0.21 7.25 -25.92 -0.19 0.02 16 24 C -0.08 0.17 9.52 -39.11 -0.37 -0.20 16 25 C 0.07 -0.10 6.65 -39.49 -0.26 -0.36 16 26 F -0.12 0.03 12.81 2.25 0.03 0.06 16 27 H 0.38 -2.21 8.42 45.56 0.38 -1.83 16 28 H 0.13 -0.19 7.96 -51.93 -0.41 -0.60 16 29 H -0.23 -0.04 5.27 56.52 0.30 0.26 16 30 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 31 H 0.16 -0.39 7.06 -52.49 -0.37 -0.76 16 32 H 0.40 -1.65 6.76 -40.82 -0.28 -1.92 16 33 H 0.09 -0.27 7.69 -51.93 -0.40 -0.67 16 34 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 35 H 0.12 -0.27 6.68 -52.48 -0.35 -0.62 16 36 H 0.12 -0.21 8.06 -52.49 -0.42 -0.64 16 37 H 0.12 -0.16 8.06 -52.49 -0.42 -0.59 16 38 H 0.12 -0.16 8.06 -52.48 -0.42 -0.58 16 39 H 0.12 -0.16 8.06 -52.48 -0.42 -0.58 16 40 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 41 H 0.09 -0.17 6.32 -51.93 -0.33 -0.50 16 42 H 0.15 -0.72 6.40 -52.49 -0.34 -1.06 16 LS Contribution 355.67 15.07 5.36 5.36 Total: 0.00 -8.04 355.67 -11.09 -19.13 By element: Atomic # 1 Polarization: -7.34 SS G_CDS: -4.74 Total: -12.07 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -5.92 Total: -3.77 kcal Atomic # 7 Polarization: 0.96 SS G_CDS: -0.29 Total: 0.68 kcal Atomic # 8 Polarization: -2.08 SS G_CDS: -0.33 Total: -2.41 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.06 Total: -0.30 kcal Atomic # 14 Polarization: -1.37 SS G_CDS: -5.24 Total: -6.61 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -8.04 -11.09 -19.13 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.517 kcal (2) G-P(sol) polarization free energy of solvation -8.040 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.558 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.087 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.128 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.645 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds