Wall clock time and date at job start Sun Mar 7 2021 08:56:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.35658 * 117.00252 * 2 1 4 4 C 1.40136 * 120.14842 * 179.97438 * 3 2 1 5 5 C 1.47538 * 120.19593 * 0.02562 * 4 3 2 6 6 O 1.21589 * 119.99883 * 359.71581 * 5 4 3 7 7 N 1.34772 * 119.99969 * 179.72009 * 5 4 3 8 8 C 1.46501 * 119.99562 * 179.97438 * 7 5 4 9 9 H 1.08993 * 112.91106 * 336.25454 * 8 7 5 10 10 C 1.53781 * 113.61200 * 107.50294 * 8 7 5 11 11 C 1.53782 * 87.08140 * 139.98143 * 10 8 7 12 12 H 1.08996 * 113.69687 * 89.12711 * 11 10 8 13 13 C 1.50706 * 113.61489 * 220.02314 * 11 10 8 14 14 C 1.38237 * 119.99761 * 217.49893 * 13 11 10 15 15 C 1.38235 * 119.99712 * 179.97438 * 14 13 11 16 16 C 1.38234 * 120.00220 * 359.94731 * 15 14 13 17 17 C 1.38233 * 120.00037 * 0.28719 * 16 15 14 18 18 C 1.38234 * 120.00191 * 37.46995 * 13 11 10 19 19 C 1.53782 * 87.08223 * 334.56608 * 11 10 8 20 20 C 1.39709 * 119.61359 * 179.72066 * 4 3 2 21 21 C 1.37784 * 119.90794 * 0.25205 * 20 4 3 22 22 C 1.50703 * 119.84960 * 179.97438 * 21 20 4 23 23 O 1.42899 * 109.46934 * 300.00485 * 22 21 20 24 24 Si 1.86298 * 109.47166 * 180.02562 * 22 21 20 25 25 C 1.38547 * 120.30241 * 0.02619 * 21 20 4 26 26 C 1.38053 * 120.38636 * 359.97422 * 25 21 20 27 27 H 1.09006 * 109.46694 * 60.00534 * 1 2 3 28 28 H 1.08998 * 109.47773 * 180.02562 * 1 2 3 29 29 H 1.08997 * 109.47817 * 300.00478 * 1 2 3 30 30 H 0.96988 * 120.00317 * 359.97438 * 7 5 4 31 31 H 1.09001 * 113.61431 * 25.43362 * 10 8 7 32 32 H 1.08998 * 113.61748 * 254.52456 * 10 8 7 33 33 H 1.08005 * 120.00088 * 359.96779 * 14 13 11 34 34 H 1.07999 * 119.99770 * 179.97438 * 15 14 13 35 35 H 1.08002 * 119.99744 * 180.02562 * 16 15 14 36 36 H 1.07998 * 120.00391 * 179.72199 * 17 16 15 37 37 H 1.07999 * 119.99990 * 0.02562 * 18 13 11 38 38 H 1.08993 * 113.61640 * 139.97737 * 19 11 10 39 39 H 1.08999 * 113.61651 * 270.80348 * 19 11 10 40 40 H 1.08003 * 120.04497 * 180.23365 * 20 4 3 41 41 H 1.08999 * 109.47226 * 60.00316 * 22 21 20 42 42 H 0.96706 * 113.99892 * 179.97438 * 23 22 21 43 43 H 1.48506 * 109.99628 * 298.67870 * 24 22 21 44 44 H 1.48498 * 110.00267 * 59.99845 * 24 22 21 45 45 H 1.08003 * 119.80279 * 179.97438 * 25 21 20 46 46 H 1.08005 * 119.95275 * 179.97438 * 26 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 3.4441 1.2856 0.0005 5 6 4.2550 0.0531 0.0005 6 8 3.7095 -1.0336 0.0053 7 7 5.6004 0.1316 -0.0046 8 6 6.4056 -1.0923 -0.0041 9 1 5.8725 -1.9507 0.4046 10 6 7.0932 -1.3779 -1.3496 11 6 8.3217 -1.8218 -0.5381 12 1 8.3139 -2.8795 -0.2748 13 6 9.6322 -1.3769 -1.1346 14 6 10.7333 -2.2113 -1.0841 15 6 11.9352 -1.8034 -1.6317 16 6 12.0358 -0.5618 -2.2309 17 6 10.9361 0.2745 -2.2772 18 6 9.7331 -0.1349 -1.7329 19 6 7.8132 -0.9034 0.5857 20 6 4.0668 2.5362 -0.0054 21 6 3.3038 3.6836 -0.0065 22 6 3.9769 5.0319 -0.0123 23 8 4.7958 5.1605 1.1517 24 14 2.6827 6.3720 -0.0116 25 6 1.9207 3.6033 -0.0011 26 6 1.2925 2.3740 0.0048 27 1 -0.3633 0.5138 -0.8901 28 1 -0.3634 -1.0276 0.0005 29 1 -0.3634 0.5139 0.8899 30 1 6.0356 0.9984 -0.0087 31 1 7.2660 -0.4846 -1.9499 32 1 6.6283 -2.1856 -1.9148 33 1 10.6544 -3.1817 -0.6166 34 1 12.7955 -2.4551 -1.5918 35 1 12.9748 -0.2434 -2.6591 36 1 11.0158 1.2464 -2.7413 37 1 8.8729 0.5169 -1.7725 38 1 7.9294 -1.3280 1.5828 39 1 8.1839 0.1192 0.5153 40 1 5.1447 2.6036 -0.0088 41 1 4.5962 5.1250 -0.9043 42 1 5.2610 6.0060 1.2139 43 1 1.8441 6.2688 -1.2329 44 1 1.8319 6.2559 1.2000 45 1 1.3305 4.5078 -0.0016 46 1 0.2139 2.3196 0.0093 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:56:13 Heat of formation + Delta-G solvation = -16.299325 kcal Electronic energy + Delta-G solvation = -28734.243552 eV Core-core repulsion = 24749.757575 eV Total energy + Delta-G solvation = -3984.485976 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.151 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -41.81324 -41.14906 -39.83600 -39.12692 -38.50401 -37.25055 -34.66481 -32.76215 -32.00461 -31.81176 -31.40461 -28.63438 -26.72065 -26.40201 -26.16341 -24.85771 -23.59575 -22.89991 -21.95833 -21.36218 -20.36751 -19.38181 -18.55844 -18.18640 -18.05632 -17.56242 -16.85344 -16.80250 -16.44475 -16.15298 -16.02542 -15.79048 -15.68376 -15.51388 -15.21191 -14.87742 -14.51950 -14.31099 -14.18110 -14.11434 -13.92441 -13.86178 -13.57028 -13.49417 -13.03699 -12.98324 -12.56428 -12.50015 -12.33394 -12.24509 -12.12441 -11.95685 -11.78699 -11.66053 -11.41987 -10.71242 -10.39063 -10.23453 -9.91973 -9.79927 -9.53107 -9.26664 -5.06135 -0.26963 0.18489 0.44983 0.51955 1.18865 1.54773 1.86043 1.87857 2.19522 2.22230 2.70498 2.85497 3.25397 3.44631 3.49840 3.57097 3.68753 3.73756 3.75839 3.92065 3.97299 4.02791 4.06611 4.11995 4.16111 4.18978 4.19339 4.23867 4.26053 4.42830 4.55081 4.56440 4.60861 4.62037 4.68303 4.74205 4.80460 4.86421 4.96997 5.01484 5.03957 5.10432 5.16274 5.22608 5.26515 5.46774 5.59312 5.61685 5.65698 5.75234 6.11870 6.27787 6.52654 6.59691 7.37511 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.278 6.278 3 C 0.193 3.807 4 C -0.173 4.173 5 C 0.564 3.436 6 O -0.515 6.515 7 N -0.720 5.720 8 C 0.125 3.875 9 H 0.118 0.882 10 C -0.145 4.145 11 C -0.071 4.071 12 H 0.103 0.897 13 C -0.069 4.069 14 C -0.116 4.116 15 C -0.118 4.118 16 C -0.125 4.125 17 C -0.118 4.118 18 C -0.118 4.118 19 C -0.136 4.136 20 C -0.016 4.016 21 C -0.124 4.124 22 C -0.066 4.066 23 O -0.546 6.546 24 Si 0.681 3.319 25 C -0.054 4.054 26 C -0.212 4.212 27 H 0.058 0.942 28 H 0.106 0.894 29 H 0.058 0.942 30 H 0.399 0.601 31 H 0.089 0.911 32 H 0.076 0.924 33 H 0.122 0.878 34 H 0.122 0.878 35 H 0.121 0.879 36 H 0.121 0.879 37 H 0.120 0.880 38 H 0.079 0.921 39 H 0.089 0.911 40 H 0.137 0.863 41 H 0.076 0.924 42 H 0.383 0.617 43 H -0.255 1.255 44 H -0.250 1.250 45 H 0.125 0.875 46 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.784 5.750 -0.930 6.091 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.188 6.188 3 C 0.144 3.856 4 C -0.177 4.177 5 C 0.351 3.649 6 O -0.391 6.391 7 N -0.372 5.372 8 C 0.020 3.980 9 H 0.136 0.864 10 C -0.183 4.183 11 C -0.090 4.090 12 H 0.121 0.879 13 C -0.069 4.069 14 C -0.134 4.134 15 C -0.136 4.136 16 C -0.143 4.143 17 C -0.136 4.136 18 C -0.136 4.136 19 C -0.174 4.174 20 C -0.035 4.035 21 C -0.124 4.124 22 C -0.176 4.176 23 O -0.353 6.353 24 Si 0.583 3.417 25 C -0.072 4.072 26 C -0.231 4.231 27 H 0.076 0.924 28 H 0.125 0.875 29 H 0.076 0.924 30 H 0.234 0.766 31 H 0.107 0.893 32 H 0.095 0.905 33 H 0.140 0.860 34 H 0.140 0.860 35 H 0.139 0.861 36 H 0.139 0.861 37 H 0.138 0.862 38 H 0.098 0.902 39 H 0.107 0.893 40 H 0.155 0.845 41 H 0.094 0.906 42 H 0.231 0.769 43 H -0.179 1.179 44 H -0.175 1.175 45 H 0.142 0.858 46 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 0.345 4.313 -0.808 4.401 hybrid contribution 0.137 0.148 -0.175 0.267 sum 0.482 4.461 -0.983 4.593 Atomic orbital electron populations 1.23238 0.78223 1.04793 1.01408 1.86381 1.21167 1.25044 1.86205 1.19055 0.90975 0.84964 0.90635 1.19366 0.90885 0.93977 1.13500 1.17940 0.82010 0.88540 0.76415 1.90839 1.71516 1.28543 1.48171 1.45871 1.05783 1.09453 1.76088 1.22521 0.89914 0.88663 0.96866 0.86385 1.23623 0.95258 1.02333 0.97133 1.21334 0.91048 1.00077 0.96527 0.87915 1.19650 0.94632 0.94379 0.98233 1.21091 0.92682 0.99651 0.99973 1.21190 0.97733 0.96523 0.98121 1.21195 0.98795 0.94524 0.99762 1.21163 0.93050 0.99741 0.99637 1.20990 0.97716 0.96050 0.98807 1.23456 0.94390 1.00657 0.98864 1.20937 0.99895 0.89700 0.92923 1.19115 0.92796 0.94074 1.06437 1.24575 1.01753 1.00419 0.90886 1.86489 1.64322 1.42076 1.42388 0.95231 0.79555 0.86236 0.80715 1.20845 0.93792 0.97142 0.95447 1.21171 1.00715 0.91456 1.09721 0.92359 0.87546 0.92359 0.76590 0.89280 0.90524 0.86030 0.86009 0.86093 0.86053 0.86183 0.90226 0.89271 0.84525 0.90641 0.76899 1.17945 1.17466 0.85787 0.84164 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 101.05 0.99 1.00 16 2 O -0.28 -1.30 8.57 -40.55 -0.35 -1.64 16 3 C 0.19 0.75 6.70 -38.70 -0.26 0.49 16 4 C -0.17 -0.61 5.89 -104.84 -0.62 -1.23 16 5 C 0.56 2.53 7.76 -12.47 -0.10 2.44 16 6 O -0.52 -4.21 14.76 -16.59 -0.24 -4.45 16 7 N -0.72 -0.78 5.30 -54.06 -0.29 -1.07 16 8 C 0.13 0.09 4.24 -67.11 -0.28 -0.20 16 9 H 0.12 0.28 7.46 -51.93 -0.39 -0.11 16 10 C -0.14 -0.02 7.25 -25.92 -0.19 -0.21 16 11 C -0.07 0.03 3.98 -90.96 -0.36 -0.33 16 12 H 0.10 -0.09 8.09 -51.93 -0.42 -0.51 16 13 C -0.07 -0.05 5.29 -104.62 -0.55 -0.60 16 14 C -0.12 -0.10 9.71 -39.58 -0.38 -0.49 16 15 C -0.12 -0.10 10.05 -39.58 -0.40 -0.49 16 16 C -0.12 -0.09 10.05 -39.58 -0.40 -0.49 16 17 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 18 C -0.12 -0.05 8.61 -39.58 -0.34 -0.39 16 19 C -0.14 0.12 7.30 -25.92 -0.19 -0.07 16 20 C -0.02 -0.02 9.08 -39.20 -0.36 -0.38 16 21 C -0.12 -0.18 5.42 -104.67 -0.57 -0.74 16 22 C -0.07 0.08 2.81 36.01 0.10 0.18 16 23 O -0.55 0.62 12.74 -35.23 -0.45 0.17 16 24 Si 0.68 -1.30 29.77 -169.99 -5.06 -6.36 16 25 C -0.05 -0.10 8.66 -39.54 -0.34 -0.44 16 26 C -0.21 -0.41 9.03 -39.48 -0.36 -0.76 16 27 H 0.06 -0.07 7.67 -51.93 -0.40 -0.47 16 28 H 0.11 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.06 -0.06 7.65 -51.93 -0.40 -0.46 16 30 H 0.40 -0.55 6.76 -40.82 -0.28 -0.83 16 31 H 0.09 -0.02 6.31 -51.93 -0.33 -0.35 16 32 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 33 H 0.12 -0.07 8.06 -52.48 -0.42 -0.49 16 34 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 35 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 36 H 0.12 -0.14 8.06 -52.49 -0.42 -0.57 16 37 H 0.12 -0.13 6.66 -52.49 -0.35 -0.48 16 38 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 39 H 0.09 -0.13 7.70 -51.93 -0.40 -0.53 16 40 H 0.14 -0.15 6.40 -52.48 -0.34 -0.49 16 41 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 42 H 0.38 -2.30 8.74 45.56 0.40 -1.90 16 43 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 44 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 45 H 0.12 0.09 4.85 -52.48 -0.25 -0.16 16 46 H 0.14 -0.06 6.30 -52.48 -0.33 -0.39 16 LS Contribution 376.25 15.07 5.67 5.67 Total: 0.00 -9.54 376.25 -11.77 -21.31 By element: Atomic # 1 Polarization: -4.40 SS G_CDS: -6.05 Total: -10.45 kcal Atomic # 6 Polarization: 1.82 SS G_CDS: -5.00 Total: -3.18 kcal Atomic # 7 Polarization: -0.78 SS G_CDS: -0.29 Total: -1.07 kcal Atomic # 8 Polarization: -4.88 SS G_CDS: -1.04 Total: -5.92 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: -5.06 Total: -6.36 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -9.54 -11.77 -21.31 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.009 kcal (2) G-P(sol) polarization free energy of solvation -9.542 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.533 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.766 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.309 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.299 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds