Wall clock time and date at job start Sun Mar 7 2021 08:56:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47192 * 2 1 4 4 C 1.50696 * 109.47534 * 240.00098 * 2 1 3 5 5 C 1.38629 * 119.94364 * 75.00018 * 4 2 1 6 6 F 1.35107 * 119.88027 * 0.02562 * 5 4 2 7 7 C 1.38684 * 120.24433 * 180.02562 * 5 4 2 8 8 C 1.37811 * 120.11289 * 359.97422 * 7 5 4 9 9 C 1.39667 * 119.88214 * 0.02766 * 8 7 5 10 10 C 1.47735 * 120.11882 * 179.97438 * 9 8 7 11 11 O 1.21568 * 119.99855 * 180.02562 * 10 9 8 12 12 N 1.34773 * 119.99405 * 359.97438 * 10 9 8 13 13 C 1.46508 * 119.99594 * 180.02562 * 12 10 9 14 14 H 1.09006 * 112.85122 * 336.19708 * 13 12 10 15 15 C 1.53779 * 113.69115 * 107.46541 * 13 12 10 16 16 C 1.53784 * 87.08045 * 139.99342 * 15 13 12 17 17 H 1.08994 * 113.61477 * 89.11454 * 16 15 13 18 18 C 1.50702 * 113.61439 * 220.02212 * 16 15 13 19 19 C 1.38236 * 120.00018 * 37.22101 * 18 16 15 20 20 C 1.38237 * 119.99936 * 179.74580 * 19 18 16 21 21 C 1.38237 * 119.99877 * 0.53057 * 20 19 18 22 22 C 1.38242 * 119.99793 * 359.74521 * 21 20 19 23 23 C 1.38229 * 119.99955 * 217.50020 * 18 16 15 24 24 C 1.53779 * 113.61245 * 205.00346 * 13 12 10 25 25 C 1.37867 * 119.93928 * 255.28215 * 4 2 1 26 26 H 0.96705 * 113.99657 * 60.00299 * 1 2 3 27 27 H 1.09000 * 109.47349 * 119.99693 * 2 1 3 28 28 H 1.48500 * 110.00063 * 298.68211 * 3 2 1 29 29 H 1.48501 * 110.00032 * 59.99676 * 3 2 1 30 30 H 1.08000 * 119.94156 * 179.97438 * 7 5 4 31 31 H 1.07999 * 120.05695 * 180.02562 * 8 7 5 32 32 H 0.96996 * 120.00779 * 0.02562 * 12 10 9 33 33 H 1.09002 * 113.61557 * 25.44454 * 15 13 12 34 34 H 1.09004 * 113.61501 * 254.53874 * 15 13 12 35 35 H 1.07999 * 119.99949 * 0.02562 * 19 18 16 36 36 H 1.07999 * 119.99992 * 180.29218 * 20 19 18 37 37 H 1.07995 * 119.99875 * 179.76512 * 21 20 19 38 38 H 1.08002 * 119.99799 * 179.97438 * 22 21 20 39 39 H 1.08003 * 120.00215 * 359.97438 * 23 18 16 40 40 H 1.08997 * 113.61646 * 105.38794 * 24 13 12 41 41 H 1.08998 * 113.69354 * 334.49102 * 24 13 12 42 42 H 1.07997 * 120.05953 * 359.97095 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 1.8690 -0.0835 -2.4653 6 9 1.3581 1.1635 -2.5621 7 6 2.3291 -0.7316 -3.6017 8 6 2.8517 -2.0034 -3.5086 9 6 2.9169 -2.6397 -2.2670 10 6 3.4756 -4.0032 -2.1612 11 8 3.5310 -4.5551 -1.0794 12 7 3.9230 -4.6355 -3.2641 13 6 4.4766 -5.9879 -3.1593 14 1 4.8540 -6.2147 -2.1622 15 6 3.5561 -7.0784 -3.7323 16 6 4.8229 -7.7371 -4.3035 17 1 5.2950 -8.4420 -3.6193 18 6 4.6385 -8.2990 -5.6897 19 6 3.8477 -7.6317 -6.6064 20 6 3.6828 -8.1444 -7.8796 21 6 4.2998 -9.3301 -8.2325 22 6 5.0860 -10.0003 -7.3138 23 6 5.2554 -9.4846 -6.0425 24 6 5.4628 -6.3388 -4.2858 25 6 2.4470 -1.9848 -1.1268 26 1 -0.3933 0.4417 -0.7651 27 1 1.7924 -0.5138 0.8900 28 1 1.5879 2.4586 -1.2242 29 1 1.5615 2.4679 1.2085 30 1 2.2778 -0.2388 -4.5614 31 1 3.2101 -2.5071 -4.3941 32 1 3.8786 -4.1952 -4.1273 33 1 2.8707 -6.7136 -4.4973 34 1 3.0596 -7.6766 -2.9681 35 1 3.3625 -6.7075 -6.3294 36 1 3.0689 -7.6207 -8.5973 37 1 4.1679 -9.7326 -9.2259 38 1 5.5677 -10.9268 -7.5894 39 1 5.8699 -10.0080 -5.3250 40 1 6.5056 -6.3399 -3.9686 41 1 5.2999 -5.7724 -5.2028 42 1 2.4914 -2.4738 -0.1650 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:56:15 Heat of formation + Delta-G solvation = -21.557723 kcal Electronic energy + Delta-G solvation = -26439.443838 eV Core-core repulsion = 22459.495676 eV Total energy + Delta-G solvation = -3979.948162 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.126 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -50.49003 -41.73312 -40.87822 -39.70190 -38.65087 -37.75412 -34.94195 -32.98720 -32.22362 -31.86102 -31.40210 -27.10846 -26.83455 -26.45967 -24.68205 -23.63860 -23.60136 -22.41115 -21.52652 -20.49041 -19.22193 -18.92568 -18.34457 -17.86574 -17.81394 -17.17413 -17.00610 -16.49504 -16.27696 -16.06503 -15.90716 -15.61260 -15.36413 -15.29922 -15.12241 -14.74274 -14.39156 -14.25087 -14.10492 -14.01805 -13.74559 -13.60279 -13.45491 -13.18598 -12.94534 -12.62996 -12.39949 -12.36462 -11.89463 -11.75931 -11.53147 -11.26288 -11.07829 -10.82379 -10.24245 -10.16790 -9.88602 -9.85855 -9.59876 -4.95437 -0.57856 -0.08645 0.38667 0.46038 1.20505 1.55911 1.63066 1.96585 2.02521 2.50630 2.78922 2.88650 3.18189 3.33403 3.39807 3.45696 3.48308 3.60518 3.62491 3.79493 3.82368 3.95572 4.02336 4.05481 4.08677 4.19785 4.25217 4.47398 4.50430 4.53924 4.57063 4.63065 4.67555 4.70751 4.75698 4.85728 4.90812 4.91975 4.99492 5.03220 5.08936 5.14346 5.41524 5.50337 5.53505 5.60072 5.67814 6.05839 6.27412 6.35201 7.08755 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.523 6.523 2 C -0.074 4.074 3 Si 0.675 3.325 4 C -0.151 4.151 5 C 0.119 3.881 6 F -0.123 7.123 7 C -0.152 4.152 8 C -0.055 4.055 9 C -0.144 4.144 10 C 0.562 3.438 11 O -0.529 6.529 12 N -0.716 5.716 13 C 0.123 3.877 14 H 0.120 0.880 15 C -0.145 4.145 16 C -0.071 4.071 17 H 0.103 0.897 18 C -0.070 4.070 19 C -0.118 4.118 20 C -0.118 4.118 21 C -0.124 4.124 22 C -0.117 4.117 23 C -0.115 4.115 24 C -0.135 4.135 25 C -0.009 4.009 26 H 0.375 0.625 27 H 0.125 0.875 28 H -0.231 1.231 29 H -0.260 1.260 30 H 0.147 0.853 31 H 0.138 0.862 32 H 0.400 0.600 33 H 0.089 0.911 34 H 0.077 0.923 35 H 0.120 0.880 36 H 0.121 0.879 37 H 0.121 0.879 38 H 0.122 0.878 39 H 0.122 0.878 40 H 0.080 0.920 41 H 0.089 0.911 42 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.235 -0.190 -4.825 5.812 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.329 6.329 2 C -0.183 4.183 3 Si 0.575 3.425 4 C -0.153 4.153 5 C 0.099 3.901 6 F -0.101 7.101 7 C -0.171 4.171 8 C -0.074 4.074 9 C -0.147 4.147 10 C 0.350 3.650 11 O -0.406 6.406 12 N -0.367 5.367 13 C 0.018 3.982 14 H 0.138 0.862 15 C -0.184 4.184 16 C -0.089 4.089 17 H 0.122 0.878 18 C -0.070 4.070 19 C -0.136 4.136 20 C -0.136 4.136 21 C -0.142 4.142 22 C -0.135 4.135 23 C -0.133 4.133 24 C -0.173 4.173 25 C -0.028 4.028 26 H 0.223 0.777 27 H 0.143 0.857 28 H -0.154 1.154 29 H -0.185 1.185 30 H 0.164 0.836 31 H 0.156 0.844 32 H 0.236 0.764 33 H 0.108 0.892 34 H 0.096 0.904 35 H 0.138 0.862 36 H 0.140 0.860 37 H 0.139 0.861 38 H 0.140 0.860 39 H 0.140 0.860 40 H 0.099 0.901 41 H 0.107 0.893 42 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 3.134 -0.012 -3.487 4.688 hybrid contribution -1.210 0.110 -1.170 1.687 sum 1.924 0.098 -4.657 5.040 Atomic orbital electron populations 1.86661 1.17106 1.79909 1.49268 1.24994 0.84282 1.11475 0.97558 0.95449 0.91443 0.74661 0.80994 1.20273 1.04150 0.96381 0.94466 1.17913 0.97271 0.80480 0.94400 1.91580 1.84460 1.37668 1.96419 1.21097 1.01815 0.95962 0.98240 1.21172 0.95630 0.93800 0.96796 1.20019 1.04865 0.95393 0.94458 1.18149 0.77510 0.85098 0.84268 1.90819 1.55351 1.67211 1.27214 1.45887 1.63395 1.17230 1.10151 1.22594 0.94619 0.80399 1.00579 0.86200 1.23628 0.96732 0.97236 1.00794 1.21329 0.97912 0.95958 0.93747 0.87835 1.19630 0.97352 0.95096 0.94928 1.20979 0.99056 1.00109 0.93467 1.21169 0.99699 0.96327 0.96404 1.21207 0.97655 0.95632 0.99703 1.21202 0.98668 0.99954 0.93697 1.21091 0.99834 0.95734 0.96687 1.23456 0.99626 0.95624 0.98643 1.21054 0.91304 0.91286 0.99160 0.77704 0.85746 1.15447 1.18452 0.83559 0.84447 0.76408 0.89218 0.90404 0.86219 0.86049 0.86067 0.85970 0.85997 0.90106 0.89251 0.83170 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.98 12.88 -35.23 -0.45 -1.44 16 2 C -0.07 -0.01 2.80 36.00 0.10 0.09 16 3 Si 0.68 -0.17 30.81 -169.99 -5.24 -5.41 16 4 C -0.15 0.01 4.78 -104.62 -0.50 -0.49 16 5 C 0.12 -0.04 6.63 -39.27 -0.26 -0.30 16 6 F -0.12 -0.09 12.57 2.25 0.03 -0.06 16 7 C -0.15 0.31 10.01 -39.57 -0.40 -0.08 16 8 C -0.06 0.15 9.54 -39.20 -0.37 -0.23 16 9 C -0.14 0.05 5.87 -104.96 -0.62 -0.57 16 10 C 0.56 0.62 7.77 -12.38 -0.10 0.52 16 11 O -0.53 -2.61 15.94 5.31 0.08 -2.53 16 12 N -0.72 1.24 5.31 -53.99 -0.29 0.96 16 13 C 0.12 -0.17 4.24 -67.12 -0.28 -0.46 16 14 H 0.12 0.02 7.46 -51.93 -0.39 -0.37 16 15 C -0.15 0.21 7.25 -25.92 -0.19 0.02 16 16 C -0.07 0.12 3.98 -90.95 -0.36 -0.24 16 17 H 0.10 -0.22 8.10 -51.93 -0.42 -0.64 16 18 C -0.07 0.03 5.29 -104.62 -0.55 -0.53 16 19 C -0.12 0.06 8.62 -39.58 -0.34 -0.28 16 20 C -0.12 0.02 10.05 -39.58 -0.40 -0.37 16 21 C -0.12 -0.01 10.05 -39.58 -0.40 -0.41 16 22 C -0.12 -0.01 10.05 -39.58 -0.40 -0.41 16 23 C -0.12 0.00 9.71 -39.59 -0.38 -0.39 16 24 C -0.14 0.36 7.30 -25.92 -0.19 0.17 16 25 C -0.01 0.00 9.21 -39.20 -0.36 -0.36 16 26 H 0.38 -0.24 8.41 45.56 0.38 0.15 16 27 H 0.12 -0.11 7.77 -51.93 -0.40 -0.51 16 28 H -0.23 -0.36 5.27 56.52 0.30 -0.06 16 29 H -0.26 -0.79 7.11 56.52 0.40 -0.39 16 30 H 0.15 -0.57 8.06 -52.49 -0.42 -1.00 16 31 H 0.14 -0.79 6.40 -52.49 -0.34 -1.12 16 32 H 0.40 -1.79 6.76 -40.82 -0.28 -2.07 16 33 H 0.09 -0.16 6.30 -51.93 -0.33 -0.49 16 34 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 35 H 0.12 -0.27 6.64 -52.49 -0.35 -0.62 16 36 H 0.12 -0.22 8.06 -52.49 -0.42 -0.64 16 37 H 0.12 -0.17 8.06 -52.49 -0.42 -0.59 16 38 H 0.12 -0.17 8.06 -52.49 -0.42 -0.59 16 39 H 0.12 -0.17 8.06 -52.48 -0.42 -0.59 16 40 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.09 -0.29 7.71 -51.93 -0.40 -0.69 16 42 H 0.15 0.08 7.59 -52.49 -0.40 -0.32 16 LS Contribution 352.73 15.07 5.32 5.32 Total: 0.00 -7.42 352.73 -11.72 -19.14 By element: Atomic # 1 Polarization: -6.49 SS G_CDS: -5.17 Total: -11.66 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: -6.00 Total: -4.32 kcal Atomic # 7 Polarization: 1.24 SS G_CDS: -0.29 Total: 0.96 kcal Atomic # 8 Polarization: -3.60 SS G_CDS: -0.37 Total: -3.97 kcal Atomic # 9 Polarization: -0.09 SS G_CDS: 0.03 Total: -0.06 kcal Atomic # 14 Polarization: -0.17 SS G_CDS: -5.24 Total: -5.41 kcal Total LS contribution 5.32 Total: 5.32 kcal Total: -7.42 -11.72 -19.14 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.417 kcal (2) G-P(sol) polarization free energy of solvation -7.419 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.835 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.723 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.141 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.558 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds