Wall clock time and date at job start Sun Mar 7 2021 08:56:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.47175 * 2 1 4 4 C 1.50704 * 109.47055 * 120.00240 * 2 1 3 5 5 C 1.34828 * 125.65392 * 64.94671 * 4 2 1 6 6 C 1.40800 * 107.04950 * 180.02562 * 5 4 2 7 7 C 1.36105 * 106.73149 * 0.02562 * 6 5 4 8 8 C 1.47570 * 125.94229 * 179.97438 * 7 6 5 9 9 C 1.39565 * 119.95598 * 180.02562 * 8 7 6 10 10 C 1.38317 * 119.81267 * 179.97438 * 9 8 7 11 11 O 1.35679 * 120.13694 * 180.02562 * 10 9 8 12 12 C 1.40369 * 119.72809 * 359.97438 * 10 9 8 13 13 C 1.47284 * 120.04915 * 180.02562 * 12 10 9 14 14 O 1.21627 * 119.99778 * 0.02562 * 13 12 10 15 15 N 1.34779 * 120.00467 * 180.02562 * 13 12 10 16 16 C 1.46496 * 120.00171 * 180.02562 * 15 13 12 17 17 H 1.09005 * 112.85109 * 23.80657 * 16 15 13 18 18 C 1.53781 * 113.61155 * 154.99776 * 16 15 13 19 19 C 1.53782 * 87.08144 * 139.98297 * 18 16 15 20 20 H 1.08999 * 113.61521 * 89.11463 * 19 18 16 21 21 C 1.50701 * 113.61401 * 220.02382 * 19 18 16 22 22 C 1.38231 * 120.00517 * 59.71744 * 21 19 18 23 23 C 1.38233 * 120.00226 * 179.78779 * 22 21 19 24 24 C 1.38233 * 119.99917 * 0.44994 * 23 22 21 25 25 C 1.38236 * 120.00038 * 359.80424 * 24 23 22 26 26 C 1.38235 * 119.99694 * 239.99822 * 21 19 18 27 27 C 1.53783 * 113.61292 * 252.49186 * 16 15 13 28 28 C 1.39924 * 119.90600 * 0.02562 * 12 10 9 29 29 C 1.36395 * 120.18238 * 359.73588 * 28 12 10 30 30 O 1.34228 * 125.65139 * 244.97303 * 4 2 1 31 31 H 0.96698 * 113.99867 * 59.99933 * 1 2 3 32 32 H 1.09002 * 109.46938 * 240.00039 * 2 1 3 33 33 H 1.48503 * 109.99991 * 60.00332 * 3 2 1 34 34 H 1.48505 * 109.99904 * 181.31970 * 3 2 1 35 35 H 1.08000 * 126.47903 * 0.04485 * 5 4 2 36 36 H 1.08000 * 126.63150 * 180.26218 * 6 5 4 37 37 H 1.08003 * 120.09171 * 359.95639 * 9 8 7 38 38 H 0.96693 * 114.00014 * 89.99603 * 11 10 9 39 39 H 0.96999 * 119.99460 * 359.97438 * 15 13 12 40 40 H 1.09006 * 113.61635 * 254.52864 * 18 16 15 41 41 H 1.09001 * 113.61810 * 25.34777 * 18 16 15 42 42 H 1.07999 * 119.99440 * 0.02562 * 22 21 19 43 43 H 1.07996 * 120.00307 * 180.27871 * 23 22 21 44 44 H 1.07999 * 120.00105 * 179.83874 * 24 23 22 45 45 H 1.08005 * 120.00172 * 180.02562 * 25 24 23 46 46 H 1.08001 * 119.99925 * 359.97438 * 26 21 19 47 47 H 1.08995 * 113.61673 * 334.57367 * 27 16 15 48 48 H 1.09005 * 113.60714 * 105.47224 * 27 16 15 49 49 H 1.07998 * 119.90420 * 180.02562 * 28 12 10 50 50 H 1.07997 * 119.85819 * 180.25095 * 29 28 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.7559 -2.0178 1.5098 6 6 2.3795 -2.2627 2.7482 7 6 2.9070 -1.0783 3.1622 8 6 3.6556 -0.8539 4.4140 9 6 4.1428 0.4186 4.7161 10 6 4.8436 0.6257 5.8905 11 8 5.3197 1.8601 6.1910 12 6 5.0593 -0.4463 6.7706 13 6 5.8042 -0.2336 8.0233 14 8 6.2324 0.8716 8.2960 15 7 6.0112 -1.2637 8.8675 16 6 6.7516 -1.0520 10.1138 17 1 6.7239 -0.0160 10.4518 18 6 6.4074 -2.0686 11.2150 19 6 7.9065 -2.0867 11.5575 20 1 8.1960 -1.3338 12.2906 21 6 8.4340 -3.4594 11.8868 22 6 8.3521 -4.4741 10.9516 23 6 8.8400 -5.7321 11.2521 24 6 9.4013 -5.9779 12.4912 25 6 9.4784 -4.9646 13.4284 26 6 8.9945 -3.7055 13.1262 27 6 8.1637 -1.6608 10.1024 28 6 4.5657 -1.7173 6.4562 29 6 3.8710 -1.9162 5.2994 30 8 2.6272 -0.1465 2.2302 31 1 -0.3933 0.4417 -0.7650 32 1 1.7923 -0.5138 -0.8900 33 1 1.5616 2.4678 1.2086 34 1 3.5347 1.7702 -0.0321 35 1 1.2357 -2.7407 0.8989 36 1 2.4327 -3.2083 3.2671 37 1 3.9733 1.2392 4.0347 38 1 4.7026 2.4077 6.6952 39 1 5.6693 -2.1450 8.6502 40 1 5.7831 -1.6581 12.0087 41 1 6.0343 -3.0183 10.8315 42 1 7.9105 -4.2829 9.9848 43 1 8.7801 -6.5236 10.5199 44 1 9.7801 -6.9614 12.7270 45 1 9.9174 -5.1565 14.3964 46 1 9.0547 -2.9138 13.8584 47 1 8.2721 -2.4994 9.4146 48 1 8.9573 -0.9209 9.9978 49 1 4.7314 -2.5419 7.1336 50 1 3.4888 -2.8985 5.0639 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_12807986.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:56:27 Heat of formation + Delta-G solvation = -3.430746 kcal Electronic energy + Delta-G solvation = -34219.438637 eV Core-core repulsion = 29532.150071 eV Total energy + Delta-G solvation = -4687.288566 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.150 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -43.77354 -41.75533 -41.00317 -39.68663 -38.53418 -38.04703 -37.81733 -34.86428 -34.24927 -33.39123 -31.90023 -31.68253 -31.31807 -30.51099 -27.29334 -26.79181 -25.97035 -24.37979 -24.10608 -23.62025 -22.76850 -22.24411 -21.75866 -21.29183 -20.54717 -19.60647 -18.76923 -18.64576 -18.23793 -17.99291 -17.24583 -17.12984 -16.74407 -16.48672 -16.33603 -16.12269 -16.02062 -15.87957 -15.67217 -15.47182 -15.19009 -14.90074 -14.52737 -14.37116 -14.28095 -14.20998 -14.11834 -13.94223 -13.90889 -13.62020 -13.57960 -13.54703 -13.11522 -12.81916 -12.70059 -12.58511 -12.36408 -12.10549 -11.88048 -11.83125 -11.71798 -11.48805 -11.15738 -10.74974 -10.73204 -10.51651 -10.07239 -9.98600 -9.83857 -9.57568 -9.03947 -5.14716 -0.81662 0.07604 0.40850 0.48110 0.61409 1.08381 1.35044 1.53019 1.63265 1.95961 1.98066 2.07454 2.60682 2.81182 2.97148 3.19087 3.37684 3.47568 3.56017 3.57637 3.66006 3.67304 3.73642 3.85356 3.88094 3.90997 3.98633 4.07830 4.09180 4.12077 4.19210 4.22071 4.33994 4.49616 4.53279 4.56568 4.60752 4.63445 4.66076 4.72961 4.75102 4.80570 4.89597 4.95627 4.96985 5.04486 5.06221 5.11482 5.13412 5.18961 5.35550 5.42250 5.50756 5.55627 5.61994 5.70413 5.94559 6.07948 6.40474 6.44383 6.66254 7.21078 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.036 4.036 3 Si 0.706 3.294 4 C -0.002 4.002 5 C -0.168 4.168 6 C -0.175 4.175 7 C 0.021 3.979 8 C 0.031 3.969 9 C -0.142 4.142 10 C 0.180 3.820 11 O -0.474 6.474 12 C -0.165 4.165 13 C 0.560 3.440 14 O -0.517 6.517 15 N -0.718 5.718 16 C 0.124 3.876 17 H 0.119 0.881 18 C -0.135 4.135 19 C -0.071 4.071 20 H 0.103 0.897 21 C -0.069 4.069 22 C -0.118 4.118 23 C -0.118 4.118 24 C -0.124 4.124 25 C -0.117 4.117 26 C -0.116 4.116 27 C -0.145 4.145 28 C -0.064 4.064 29 C -0.115 4.115 30 O -0.169 6.169 31 H 0.391 0.609 32 H 0.096 0.904 33 H -0.249 1.249 34 H -0.252 1.252 35 H 0.158 0.842 36 H 0.159 0.841 37 H 0.140 0.860 38 H 0.399 0.601 39 H 0.399 0.601 40 H 0.079 0.921 41 H 0.089 0.911 42 H 0.120 0.880 43 H 0.121 0.879 44 H 0.121 0.879 45 H 0.122 0.878 46 H 0.122 0.878 47 H 0.089 0.911 48 H 0.077 0.923 49 H 0.137 0.863 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.214 -3.524 -2.650 5.456 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.145 4.145 3 Si 0.605 3.395 4 C -0.052 4.052 5 C -0.187 4.187 6 C -0.194 4.194 7 C -0.028 4.028 8 C 0.030 3.970 9 C -0.161 4.161 10 C 0.133 3.867 11 O -0.285 6.285 12 C -0.169 4.169 13 C 0.347 3.653 14 O -0.393 6.393 15 N -0.370 5.370 16 C 0.019 3.981 17 H 0.137 0.863 18 C -0.174 4.174 19 C -0.090 4.090 20 H 0.121 0.879 21 C -0.069 4.069 22 C -0.136 4.136 23 C -0.136 4.136 24 C -0.142 4.142 25 C -0.135 4.135 26 C -0.134 4.134 27 C -0.184 4.184 28 C -0.082 4.082 29 C -0.133 4.133 30 O -0.066 6.066 31 H 0.240 0.760 32 H 0.114 0.886 33 H -0.173 1.173 34 H -0.176 1.176 35 H 0.176 0.824 36 H 0.176 0.824 37 H 0.158 0.842 38 H 0.258 0.742 39 H 0.235 0.765 40 H 0.098 0.902 41 H 0.107 0.893 42 H 0.138 0.862 43 H 0.140 0.860 44 H 0.139 0.861 45 H 0.140 0.860 46 H 0.140 0.860 47 H 0.108 0.892 48 H 0.095 0.905 49 H 0.155 0.845 50 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -1.750 -2.286 -1.741 3.365 hybrid contribution -0.550 -1.187 0.260 1.333 sum -2.300 -3.473 -1.481 4.421 Atomic orbital electron populations 1.86463 1.16313 1.82001 1.50268 1.23794 0.86186 1.11704 0.92835 0.95279 0.81083 0.76196 0.86972 1.21460 1.00129 0.92669 0.90968 1.21552 1.03561 0.95634 0.97959 1.21911 1.01821 0.98326 0.97338 1.20353 1.04050 0.87614 0.90780 1.17764 0.95575 0.93722 0.89933 1.21572 0.98876 0.97484 0.98147 1.18273 0.91286 0.85824 0.91339 1.84771 1.44568 1.22730 1.76464 1.20501 1.04786 0.95050 0.96572 1.17992 0.79521 0.84665 0.83087 1.90844 1.49729 1.23658 1.75069 1.45900 1.57617 1.12067 1.21420 1.22556 0.91413 1.00786 0.83336 0.86327 1.23458 0.96095 0.99562 0.98240 1.21332 0.95723 0.94317 0.97592 0.87867 1.19632 0.98518 0.94676 0.94115 1.20979 1.00532 0.92908 0.99175 1.21163 0.98521 0.96925 0.96968 1.21201 0.99740 0.99327 0.93950 1.21197 0.99553 0.93231 0.99548 1.21091 0.98744 0.97198 0.96346 1.23624 0.97715 1.01259 0.95764 1.20816 0.95347 0.95530 0.96536 1.20700 1.00215 0.98644 0.93782 1.83958 1.58055 1.38148 1.26484 0.76000 0.88586 1.17289 1.17598 0.82444 0.82356 0.84217 0.74230 0.76547 0.90190 0.89278 0.86222 0.86050 0.86069 0.85978 0.86016 0.89242 0.90454 0.84538 0.84251 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.28 12.86 -35.23 -0.45 -0.17 16 2 C -0.04 0.01 2.97 36.01 0.11 0.12 16 3 Si 0.71 -0.54 32.11 -169.99 -5.46 -6.00 16 4 C 0.00 -0.01 6.24 -35.52 -0.22 -0.23 16 5 C -0.17 -0.32 10.78 -39.82 -0.43 -0.75 16 6 C -0.17 -0.25 10.26 -39.38 -0.40 -0.65 16 7 C 0.02 0.06 7.02 -36.54 -0.26 -0.19 16 8 C 0.03 0.06 5.87 -104.95 -0.62 -0.56 16 9 C -0.14 -0.37 9.65 -39.06 -0.38 -0.75 16 10 C 0.18 0.53 6.71 -38.75 -0.26 0.27 16 11 O -0.47 -1.70 11.56 -40.70 -0.47 -2.17 16 12 C -0.17 -0.29 5.89 -104.79 -0.62 -0.91 16 13 C 0.56 1.58 7.75 -12.58 -0.10 1.48 16 14 O -0.52 -3.34 14.74 -16.71 -0.25 -3.58 16 15 N -0.72 0.26 5.30 -54.13 -0.29 -0.03 16 16 C 0.12 -0.04 4.24 -67.12 -0.28 -0.32 16 17 H 0.12 0.15 7.46 -51.93 -0.39 -0.24 16 18 C -0.14 0.24 7.29 -25.92 -0.19 0.05 16 19 C -0.07 0.07 3.98 -90.96 -0.36 -0.29 16 20 H 0.10 -0.14 8.10 -51.93 -0.42 -0.56 16 21 C -0.07 -0.02 5.29 -104.62 -0.55 -0.57 16 22 C -0.12 -0.01 8.60 -39.59 -0.34 -0.35 16 23 C -0.12 -0.03 10.05 -39.59 -0.40 -0.43 16 24 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 25 C -0.12 -0.07 10.05 -39.58 -0.40 -0.46 16 26 C -0.12 -0.06 9.71 -39.58 -0.38 -0.45 16 27 C -0.14 0.06 7.25 -25.92 -0.19 -0.12 16 28 C -0.06 0.06 9.47 -39.61 -0.38 -0.31 16 29 C -0.12 0.06 9.48 -39.60 -0.38 -0.31 16 30 O -0.17 -0.72 8.79 4.75 0.04 -0.68 16 31 H 0.39 -2.36 8.74 45.56 0.40 -1.96 16 32 H 0.10 -0.28 7.96 -51.93 -0.41 -0.69 16 33 H -0.25 -0.78 7.11 56.52 0.40 -0.38 16 34 H -0.25 -0.58 7.11 56.52 0.40 -0.18 16 35 H 0.16 0.00 8.06 -52.49 -0.42 -0.42 16 36 H 0.16 -0.24 7.24 -52.49 -0.38 -0.62 16 37 H 0.14 0.37 7.90 -52.48 -0.41 -0.05 16 38 H 0.40 -0.10 9.06 45.56 0.41 0.32 16 39 H 0.40 -1.24 6.73 -40.82 -0.27 -1.51 16 40 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 41 H 0.09 -0.22 7.69 -51.93 -0.40 -0.61 16 42 H 0.12 -0.19 6.67 -52.49 -0.35 -0.54 16 43 H 0.12 -0.16 8.06 -52.49 -0.42 -0.59 16 44 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 45 H 0.12 -0.12 8.06 -52.48 -0.42 -0.54 16 46 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 47 H 0.09 -0.07 6.32 -51.93 -0.33 -0.40 16 48 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 49 H 0.14 -0.59 6.38 -52.49 -0.33 -0.92 16 50 H 0.14 -0.42 6.95 -52.49 -0.37 -0.79 16 LS Contribution 421.96 15.07 6.36 6.36 Total: 0.00 -11.85 421.96 -13.35 -25.19 By element: Atomic # 1 Polarization: -7.29 SS G_CDS: -5.41 Total: -12.71 kcal Atomic # 6 Polarization: 1.20 SS G_CDS: -7.42 Total: -6.22 kcal Atomic # 7 Polarization: 0.26 SS G_CDS: -0.29 Total: -0.03 kcal Atomic # 8 Polarization: -5.48 SS G_CDS: -1.13 Total: -6.60 kcal Atomic # 14 Polarization: -0.54 SS G_CDS: -5.46 Total: -6.00 kcal Total LS contribution 6.36 Total: 6.36 kcal Total: -11.85 -13.35 -25.19 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_12807986.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.761 kcal (2) G-P(sol) polarization free energy of solvation -11.845 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.915 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.346 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.192 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.431 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds