Wall clock time and date at job start Sun Mar 7 2021 08:56:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.39282 * 121.02778 * 2 1 4 4 C 1.46499 * 134.20236 * 359.97438 * 3 2 1 5 5 C 1.50694 * 126.59893 * 0.02562 * 4 3 2 6 6 O 1.42897 * 109.47343 * 75.00106 * 5 4 3 7 7 Si 1.86302 * 109.47049 * 195.00088 * 5 4 3 8 8 C 1.34180 * 106.79850 * 180.02562 * 4 3 2 9 9 N 1.36943 * 109.95834 * 359.97438 * 8 4 3 10 10 C 1.37162 * 110.11184 * 0.02562 * 9 8 4 11 11 N 1.32814 * 132.96606 * 180.02562 * 10 9 8 12 12 C 1.31317 * 121.88991 * 179.73769 * 11 10 9 13 13 C 1.39747 * 121.03065 * 180.02562 * 2 1 3 14 14 C 1.47660 * 120.45431 * 359.97438 * 13 2 1 15 15 O 1.21579 * 120.00261 * 354.29913 * 14 13 2 16 16 N 1.34778 * 120.00227 * 174.29945 * 14 13 2 17 17 C 1.46501 * 120.00419 * 179.97438 * 16 14 13 18 18 H 1.09001 * 112.90518 * 336.25433 * 17 16 14 19 19 C 1.53956 * 113.66689 * 107.55038 * 17 16 14 20 20 C 1.53773 * 87.11205 * 139.89099 * 19 17 16 21 21 H 1.09006 * 113.61366 * 89.18404 * 20 19 17 22 22 C 1.50697 * 113.61718 * 220.08822 * 20 19 17 23 23 C 1.38244 * 119.99590 * 37.22702 * 22 20 19 24 24 C 1.38235 * 119.99473 * 179.81378 * 23 22 20 25 25 C 1.38230 * 120.00252 * 0.39225 * 24 23 22 26 26 C 1.38238 * 120.00001 * 359.85702 * 25 24 23 27 27 C 1.38229 * 120.00150 * 359.95781 * 26 25 24 28 28 C 1.53777 * 113.61577 * 204.99785 * 17 16 14 29 29 H 1.09005 * 109.47113 * 263.69413 * 1 2 3 30 30 H 1.09004 * 109.47334 * 23.68935 * 1 2 3 31 31 H 1.08997 * 109.47240 * 143.69149 * 1 2 3 32 32 H 1.09001 * 109.47183 * 314.99928 * 5 4 3 33 33 H 0.96701 * 114.00418 * 179.97438 * 6 5 4 34 34 H 1.48500 * 110.00096 * 178.68281 * 7 5 4 35 35 H 1.48506 * 110.00017 * 300.00167 * 7 5 4 36 36 H 1.08011 * 125.02012 * 180.02562 * 8 4 3 37 37 H 0.97001 * 124.95097 * 179.97438 * 9 8 4 38 38 H 1.07999 * 119.30932 * 180.26852 * 12 11 10 39 39 H 0.97005 * 119.99970 * 359.97438 * 16 14 13 40 40 H 1.09006 * 113.53879 * 25.33785 * 19 17 16 41 41 H 1.09003 * 113.73999 * 254.47596 * 19 17 16 42 42 H 1.07990 * 119.99955 * 359.97438 * 23 22 20 43 43 H 1.08001 * 119.99779 * 180.23498 * 24 23 22 44 44 H 1.08007 * 119.99997 * 179.84010 * 25 24 23 45 45 H 1.08004 * 119.99543 * 179.97438 * 26 25 24 46 46 H 1.07998 * 120.00070 * 179.97438 * 27 26 25 47 47 H 1.09004 * 113.61247 * 105.46895 * 28 17 16 48 48 H 1.08997 * 113.61344 * 334.65450 * 28 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1935 0.0000 4 6 1.8515 2.6101 -0.0005 5 6 0.4526 3.1704 -0.0006 6 8 -0.1192 3.0244 1.3008 7 14 0.5070 4.9762 -0.4559 8 6 2.9947 3.3126 -0.0008 9 7 4.0668 2.4606 0.0000 10 6 3.6348 1.1588 0.0003 11 7 4.2720 -0.0065 0.0015 12 6 3.6266 -1.1501 0.0066 13 6 2.2274 -1.1975 -0.0005 14 6 1.5225 -2.4950 -0.0005 15 8 0.3117 -2.5290 0.1045 16 7 2.2212 -3.6416 -0.1170 17 6 1.5220 -4.9289 -0.1164 18 1 0.5515 -4.8843 0.3779 19 6 1.4803 -5.6102 -1.4964 20 6 1.7353 -6.9372 -0.7625 21 1 0.8232 -7.4428 -0.4450 22 6 2.6923 -7.8515 -1.4831 23 6 3.7785 -7.3235 -2.1557 24 6 4.6586 -8.1624 -2.8134 25 6 4.4479 -9.5286 -2.8054 26 6 3.3588 -10.0561 -2.1372 27 6 2.4809 -9.2176 -1.4762 28 6 2.3968 -6.1050 0.3485 29 1 -0.3633 -0.1129 1.0215 30 1 -0.3634 0.9411 -0.4129 31 1 -0.3633 -0.8281 -0.6085 32 1 -0.1550 2.6307 -0.7271 33 1 -1.0213 3.3648 1.3746 34 1 -0.8693 5.5329 -0.4906 35 1 1.3324 5.7232 0.5270 36 1 3.0597 4.3907 -0.0007 37 1 4.9965 2.7373 -0.0003 38 1 4.1869 -2.0734 0.0118 39 1 3.1872 -3.6144 -0.2012 40 1 2.2965 -5.3112 -2.1543 41 1 0.5055 -5.5597 -1.9815 42 1 3.9410 -6.2559 -2.1651 43 1 5.5093 -7.7503 -3.3357 44 1 5.1341 -10.1838 -3.3215 45 1 3.1941 -11.1235 -2.1313 46 1 1.6298 -9.6297 -0.9545 47 1 2.1613 -6.4535 1.3542 48 1 3.4637 -5.9425 0.1959 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:56:31 Heat of formation + Delta-G solvation = 64.771798 kcal Electronic energy + Delta-G solvation = -31461.508712 eV Core-core repulsion = 27256.378714 eV Total energy + Delta-G solvation = -4205.129999 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.157 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.79433 -41.46418 -40.41131 -38.98927 -38.36587 -37.79916 -35.19952 -34.57416 -32.09570 -31.90871 -31.73253 -30.71711 -28.80440 -26.74601 -26.64743 -25.94380 -24.52595 -23.91537 -23.54431 -22.40948 -21.63994 -20.53983 -20.23182 -19.20588 -18.56405 -18.49678 -18.16066 -17.51726 -17.08471 -16.65373 -16.42448 -16.33358 -15.93584 -15.75718 -15.53328 -15.31688 -15.17797 -15.02814 -14.66427 -14.34481 -14.21215 -14.10825 -13.95672 -13.84055 -13.64568 -13.52627 -13.49529 -13.19568 -13.07334 -12.89746 -12.65110 -12.50808 -12.30272 -11.99440 -11.78982 -11.67989 -11.44168 -11.07000 -10.98054 -10.34137 -10.19375 -10.01516 -9.80438 -9.56270 -9.51665 -9.08445 -5.01895 -0.18746 -0.00722 0.44388 0.51575 1.22175 1.39115 1.51922 1.65940 1.89594 1.95765 2.15831 2.83976 2.88498 3.28396 3.36616 3.45584 3.59759 3.65140 3.69618 3.73920 3.77321 3.82267 3.91113 4.02463 4.10561 4.11705 4.14690 4.16078 4.25280 4.33007 4.39902 4.55105 4.59965 4.66083 4.68744 4.71593 4.78542 4.82494 4.93744 4.98270 4.99702 5.08623 5.10027 5.15433 5.21184 5.26154 5.37976 5.52082 5.59068 5.61327 5.65416 5.74147 5.81272 6.11424 6.14547 6.48173 6.52067 6.89555 7.28360 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C 0.085 3.915 3 C -0.148 4.148 4 C -0.133 4.133 5 C -0.044 4.044 6 O -0.533 6.533 7 Si 0.681 3.319 8 C 0.072 3.928 9 N -0.569 5.569 10 C 0.308 3.692 11 N -0.503 5.503 12 C 0.180 3.820 13 C -0.235 4.235 14 C 0.573 3.427 15 O -0.530 6.530 16 N -0.718 5.718 17 C 0.125 3.875 18 H 0.119 0.881 19 C -0.145 4.145 20 C -0.071 4.071 21 H 0.103 0.897 22 C -0.069 4.069 23 C -0.118 4.118 24 C -0.118 4.118 25 C -0.124 4.124 26 C -0.118 4.118 27 C -0.116 4.116 28 C -0.136 4.136 29 H 0.085 0.915 30 H 0.066 0.934 31 H 0.098 0.902 32 H 0.078 0.922 33 H 0.378 0.622 34 H -0.258 1.258 35 H -0.253 1.253 36 H 0.184 0.816 37 H 0.426 0.574 38 H 0.162 0.838 39 H 0.399 0.601 40 H 0.089 0.911 41 H 0.076 0.924 42 H 0.121 0.879 43 H 0.121 0.879 44 H 0.121 0.879 45 H 0.122 0.878 46 H 0.122 0.878 47 H 0.079 0.921 48 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.055 1.313 -2.837 3.741 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.076 3.924 3 C -0.155 4.155 4 C -0.141 4.141 5 C -0.154 4.154 6 O -0.340 6.340 7 Si 0.581 3.419 8 C -0.055 4.055 9 N -0.175 5.175 10 C 0.075 3.925 11 N -0.216 5.216 12 C 0.011 3.989 13 C -0.242 4.242 14 C 0.362 3.638 15 O -0.408 6.408 16 N -0.369 5.369 17 C 0.020 3.980 18 H 0.137 0.863 19 C -0.183 4.183 20 C -0.090 4.090 21 H 0.121 0.879 22 C -0.069 4.069 23 C -0.136 4.136 24 C -0.136 4.136 25 C -0.143 4.143 26 C -0.136 4.136 27 C -0.134 4.134 28 C -0.174 4.174 29 H 0.104 0.896 30 H 0.085 0.915 31 H 0.116 0.884 32 H 0.096 0.904 33 H 0.226 0.774 34 H -0.182 1.182 35 H -0.177 1.177 36 H 0.201 0.799 37 H 0.265 0.735 38 H 0.179 0.821 39 H 0.235 0.765 40 H 0.108 0.892 41 H 0.095 0.905 42 H 0.139 0.861 43 H 0.140 0.860 44 H 0.139 0.861 45 H 0.140 0.860 46 H 0.140 0.860 47 H 0.098 0.902 48 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges 2.600 2.026 -2.383 4.067 hybrid contribution -0.579 -0.266 0.751 0.985 sum 2.022 1.760 -1.632 3.138 Atomic orbital electron populations 1.21164 0.88944 1.03519 1.04212 1.19888 0.97074 0.89193 0.86218 1.19461 0.92865 0.93501 1.09654 1.19422 0.93124 0.90584 1.10938 1.24160 0.92105 1.11163 0.87963 1.86645 1.33655 1.83885 1.29813 0.95257 0.83415 0.74094 0.89147 1.21720 0.85007 0.95932 1.02811 1.41485 1.09570 1.02677 1.63745 1.18473 0.89272 0.85897 0.98847 1.66433 1.40540 0.95990 1.18652 1.22490 0.90080 0.94421 0.91891 1.20423 0.94768 0.93745 1.15260 1.17905 0.86867 0.83334 0.75736 1.90749 1.13539 1.87024 1.49462 1.45877 1.10476 1.05491 1.75078 1.22563 0.97684 0.80559 0.97198 0.86290 1.23654 1.03299 0.94287 0.97105 1.21326 0.97854 0.93632 0.96188 0.87923 1.19641 0.95706 0.93717 0.97870 1.20996 0.94756 0.99732 0.98083 1.21169 0.99306 0.93729 0.99378 1.21198 0.97957 0.95429 0.99667 1.21191 0.94927 0.99893 0.97562 1.21085 0.99637 0.92958 0.99719 1.23456 0.99991 0.94733 0.99235 0.89632 0.91499 0.88395 0.90431 0.77398 1.18233 1.17712 0.79928 0.73524 0.82134 0.76550 0.89237 0.90493 0.86129 0.86049 0.86108 0.86025 0.86044 0.90223 0.89245 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.34 8.69 36.01 0.31 -0.03 16 2 C 0.08 0.29 5.98 -103.67 -0.62 -0.33 16 3 C -0.15 -0.48 6.16 -105.13 -0.65 -1.12 16 4 C -0.13 -0.18 5.61 -102.73 -0.58 -0.75 16 5 C -0.04 0.01 2.05 36.00 0.07 0.08 16 6 O -0.53 -0.58 12.86 -35.23 -0.45 -1.03 16 7 Si 0.68 -1.32 30.80 -169.99 -5.24 -6.56 16 8 C 0.07 -0.05 10.44 -16.70 -0.17 -0.22 16 9 N -0.57 0.06 6.04 -12.11 -0.07 -0.01 16 10 C 0.31 0.87 8.42 -155.71 -1.31 -0.44 16 11 N -0.50 -1.47 10.37 -11.96 -0.12 -1.59 16 12 C 0.18 0.22 10.67 -17.11 -0.18 0.04 16 13 C -0.23 -0.58 5.89 -104.83 -0.62 -1.20 16 14 C 0.57 1.44 7.72 -12.41 -0.10 1.34 16 15 O -0.53 -2.83 13.09 5.30 0.07 -2.76 16 16 N -0.72 0.37 5.31 -53.93 -0.29 0.08 16 17 C 0.12 -0.08 4.25 -67.03 -0.28 -0.36 16 18 H 0.12 0.10 7.47 -51.93 -0.39 -0.29 16 19 C -0.14 0.13 7.26 -25.83 -0.19 -0.06 16 20 C -0.07 0.08 3.98 -90.97 -0.36 -0.28 16 21 H 0.10 -0.16 8.10 -51.93 -0.42 -0.58 16 22 C -0.07 -0.01 5.29 -104.62 -0.55 -0.57 16 23 C -0.12 -0.01 8.63 -39.58 -0.34 -0.35 16 24 C -0.12 -0.04 10.05 -39.59 -0.40 -0.44 16 25 C -0.12 -0.07 10.05 -39.58 -0.40 -0.47 16 26 C -0.12 -0.07 10.05 -39.58 -0.40 -0.47 16 27 C -0.12 -0.06 9.71 -39.59 -0.38 -0.45 16 28 C -0.14 0.24 7.29 -25.92 -0.19 0.05 16 29 H 0.09 0.31 8.14 -51.93 -0.42 -0.11 16 30 H 0.07 0.09 5.05 -51.93 -0.26 -0.17 16 31 H 0.10 0.36 5.95 -51.93 -0.31 0.05 16 32 H 0.08 -0.10 6.05 -51.93 -0.31 -0.41 16 33 H 0.38 -1.07 8.74 45.56 0.40 -0.67 16 34 H -0.26 -0.10 7.11 56.52 0.40 0.31 16 35 H -0.25 -0.10 7.04 56.52 0.40 0.30 16 36 H 0.18 -0.69 6.31 -52.48 -0.33 -1.02 16 37 H 0.43 -1.21 8.96 -40.82 -0.37 -1.58 16 38 H 0.16 -0.39 6.43 -52.49 -0.34 -0.73 16 39 H 0.40 -1.19 6.80 -40.82 -0.28 -1.47 16 40 H 0.09 -0.10 6.30 -51.93 -0.33 -0.43 16 41 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 42 H 0.12 -0.19 6.64 -52.49 -0.35 -0.53 16 43 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 44 H 0.12 -0.12 8.06 -52.48 -0.42 -0.54 16 45 H 0.12 -0.12 8.06 -52.48 -0.42 -0.54 16 46 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 47 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 48 H 0.09 -0.21 7.71 -51.93 -0.40 -0.61 16 LS Contribution 387.94 15.07 5.85 5.85 Total: 0.00 -9.73 387.94 -13.43 -23.16 By element: Atomic # 1 Polarization: -5.28 SS G_CDS: -5.84 Total: -11.12 kcal Atomic # 6 Polarization: 1.32 SS G_CDS: -7.33 Total: -6.01 kcal Atomic # 7 Polarization: -1.04 SS G_CDS: -0.48 Total: -1.52 kcal Atomic # 8 Polarization: -3.41 SS G_CDS: -0.38 Total: -3.79 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.24 Total: -6.56 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -9.73 -13.43 -23.16 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.931 kcal (2) G-P(sol) polarization free energy of solvation -9.726 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 78.205 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.433 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.159 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.772 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds