Wall clock time and date at job start Sun Mar 7 2021 08:56:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47399 * 2 1 4 4 C 1.50700 * 109.47034 * 240.00320 * 2 1 3 5 5 C 1.38892 * 119.67886 * 120.00225 * 4 2 1 6 6 C 1.36476 * 120.61574 * 179.97438 * 5 4 2 7 7 C 1.40065 * 119.83277 * 359.97438 * 6 5 4 8 8 C 1.41588 * 133.38199 * 179.97438 * 7 6 5 9 9 C 1.35868 * 107.72649 * 180.02562 * 8 7 6 10 10 C 1.47062 * 125.42964 * 179.97438 * 9 8 7 11 11 O 1.21651 * 119.99644 * 0.02562 * 10 9 8 12 12 N 1.34774 * 120.00377 * 180.02562 * 10 9 8 13 13 C 1.46498 * 120.00257 * 179.97438 * 12 10 9 14 14 H 1.08996 * 112.90441 * 23.74581 * 13 12 10 15 15 C 1.53777 * 113.61534 * 155.00011 * 13 12 10 16 16 C 1.53787 * 87.07927 * 139.98038 * 15 13 12 17 17 H 1.08999 * 113.61318 * 89.20267 * 16 15 13 18 18 C 1.50700 * 113.61241 * 220.01624 * 16 15 13 19 19 C 1.38235 * 120.00255 * 239.99922 * 18 16 15 20 20 C 1.38234 * 120.00220 * 179.97438 * 19 18 16 21 21 C 1.38233 * 120.00037 * 0.28719 * 20 19 18 22 22 C 1.38238 * 119.99742 * 359.52139 * 21 20 19 23 23 C 1.38234 * 120.00095 * 0.43554 * 22 21 20 24 24 C 1.53777 * 87.08106 * 334.56584 * 16 15 13 25 25 N 1.38154 * 109.14560 * 0.22786 * 9 8 7 26 26 C 1.37483 * 108.78982 * 359.62016 * 25 9 8 27 27 C 1.37714 * 119.67238 * 299.97472 * 4 2 1 28 28 H 0.96707 * 113.99832 * 59.99615 * 1 2 3 29 29 H 1.09000 * 109.47024 * 119.99930 * 2 1 3 30 30 H 1.48503 * 109.99999 * 59.99946 * 3 2 1 31 31 H 1.48499 * 110.00275 * 181.31765 * 3 2 1 32 32 H 1.07995 * 119.69300 * 359.97438 * 5 4 2 33 33 H 1.08000 * 120.08250 * 179.97438 * 6 5 4 34 34 H 1.07997 * 126.13893 * 0.02562 * 8 7 6 35 35 H 0.97001 * 119.99656 * 0.02562 * 12 10 9 36 36 H 1.09000 * 113.61083 * 25.43600 * 15 13 12 37 37 H 1.08999 * 113.61494 * 254.53042 * 15 13 12 38 38 H 1.07999 * 119.99770 * 0.02562 * 19 18 16 39 39 H 1.08002 * 119.99744 * 180.02562 * 20 19 18 40 40 H 1.07998 * 120.00395 * 179.72811 * 21 20 19 41 41 H 1.08003 * 120.00356 * 180.21645 * 22 21 20 42 42 H 1.08001 * 120.00324 * 179.78922 * 23 22 21 43 43 H 1.09009 * 113.61202 * 139.97782 * 24 16 15 44 44 H 1.08996 * 113.61760 * 270.87858 * 24 16 15 45 45 H 0.97003 * 125.60267 * 179.75023 * 25 9 8 46 46 H 1.08000 * 120.10117 * 359.97438 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7294 -0.0289 -2.1403 6 6 3.1952 -0.6537 -3.2607 7 6 2.8676 -1.9946 -3.4979 8 6 3.1826 -2.9037 -4.5367 9 6 2.5855 -4.0887 -4.2447 10 6 2.6587 -5.3056 -5.0671 11 8 3.2948 -5.3016 -6.1040 12 7 2.0210 -6.4253 -4.6721 13 6 2.0934 -7.6375 -5.4916 14 1 2.9730 -7.6627 -6.1349 15 6 1.8761 -8.9342 -4.6941 16 6 1.0523 -9.4390 -5.8906 17 1 1.6470 -9.9581 -6.6422 18 6 -0.1843 -10.2031 -5.4927 19 6 -0.3423 -11.5176 -5.8901 20 6 -1.4763 -12.2186 -5.5246 21 6 -2.4550 -11.6032 -4.7669 22 6 -2.2952 -10.2899 -4.3662 23 6 -1.1608 -9.5892 -4.7308 24 6 0.7827 -7.9629 -6.2272 25 7 1.8940 -3.9665 -3.0550 26 6 2.0586 -2.6883 -2.5763 27 6 1.5949 -2.0290 -1.4415 28 1 -0.3933 0.4418 -0.7651 29 1 1.7923 -0.5138 0.8900 30 1 1.5616 2.4679 1.2085 31 1 3.5347 1.7702 -0.0321 32 1 2.9838 1.0050 -1.9595 33 1 3.8149 -0.1154 -3.9626 34 1 3.7888 -2.6929 -5.4054 35 1 1.5135 -6.4284 -3.8455 36 1 1.2882 -8.7953 -3.7868 37 1 2.7915 -9.5008 -4.5241 38 1 0.4206 -11.9972 -6.4853 39 1 -1.5995 -13.2458 -5.8348 40 1 -3.3431 -12.1495 -4.4851 41 1 -3.0582 -9.8101 -3.7712 42 1 -1.0375 -8.5620 -4.4207 43 1 0.8156 -7.7455 -7.2949 44 1 -0.1040 -7.5586 -5.7390 45 1 1.3786 -4.6680 -2.6268 46 1 0.9745 -2.5506 -0.7278 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:56:37 Heat of formation + Delta-G solvation = 46.751881 kcal Electronic energy + Delta-G solvation = -28558.299659 eV Core-core repulsion = 24573.351789 eV Total energy + Delta-G solvation = -3984.947871 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.146 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.71506 -41.49039 -40.25933 -39.10311 -38.60705 -36.91428 -34.91097 -33.28074 -32.01298 -31.80016 -30.99757 -30.41547 -27.35750 -26.87780 -25.93627 -24.36831 -23.66365 -23.22475 -22.33458 -21.93830 -21.33548 -20.54287 -19.40810 -18.46671 -18.32314 -17.76914 -17.05193 -16.90360 -16.52855 -16.42763 -16.18419 -15.96704 -15.62901 -15.49960 -15.45289 -15.07629 -14.86718 -14.69511 -14.47772 -14.39325 -14.24900 -14.12942 -14.00437 -13.65190 -13.23632 -13.15294 -12.67181 -12.60654 -12.54681 -12.43602 -11.98022 -11.93940 -11.80582 -11.66160 -11.57790 -11.18471 -10.95028 -10.47276 -10.25466 -9.88315 -9.62804 -9.33511 -8.83953 -5.02108 -0.35465 0.36189 0.43727 0.50600 0.98892 1.28243 1.64518 1.74413 1.91524 1.99046 2.23640 2.76076 2.76771 3.28767 3.40496 3.49842 3.57508 3.59063 3.62414 3.68997 3.78506 3.92521 3.99354 4.03099 4.05864 4.17650 4.23024 4.27715 4.39726 4.45254 4.46142 4.50423 4.52063 4.56022 4.62254 4.67390 4.80652 4.87753 4.88551 4.94586 4.98011 5.05404 5.09828 5.26346 5.37334 5.40198 5.51111 5.51374 5.57900 5.59766 5.65031 5.95139 6.03470 6.17253 6.32814 6.54226 6.97310 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.068 4.068 3 Si 0.693 3.307 4 C -0.088 4.088 5 C -0.146 4.146 6 C -0.050 4.050 7 C -0.117 4.117 8 C -0.099 4.099 9 C 0.012 3.988 10 C 0.586 3.414 11 O -0.516 6.516 12 N -0.719 5.719 13 C 0.123 3.877 14 H 0.122 0.878 15 C -0.136 4.136 16 C -0.070 4.070 17 H 0.104 0.896 18 C -0.070 4.070 19 C -0.115 4.115 20 C -0.117 4.117 21 C -0.123 4.123 22 C -0.118 4.118 23 C -0.118 4.118 24 C -0.145 4.145 25 N -0.579 5.579 26 C 0.116 3.884 27 C -0.104 4.104 28 H 0.380 0.620 29 H 0.114 0.886 30 H -0.256 1.256 31 H -0.257 1.257 32 H 0.129 0.871 33 H 0.132 0.868 34 H 0.159 0.841 35 H 0.396 0.604 36 H 0.088 0.912 37 H 0.081 0.919 38 H 0.122 0.878 39 H 0.123 0.877 40 H 0.122 0.878 41 H 0.122 0.878 42 H 0.119 0.881 43 H 0.079 0.921 44 H 0.089 0.911 45 H 0.417 0.583 46 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.292 -0.567 0.480 2.409 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.179 4.179 3 Si 0.595 3.405 4 C -0.090 4.090 5 C -0.165 4.165 6 C -0.069 4.069 7 C -0.121 4.121 8 C -0.126 4.126 9 C -0.097 4.097 10 C 0.373 3.627 11 O -0.391 6.391 12 N -0.369 5.369 13 C 0.018 3.982 14 H 0.140 0.860 15 C -0.174 4.174 16 C -0.089 4.089 17 H 0.123 0.877 18 C -0.070 4.070 19 C -0.133 4.133 20 C -0.135 4.135 21 C -0.141 4.141 22 C -0.136 4.136 23 C -0.136 4.136 24 C -0.183 4.183 25 N -0.183 5.183 26 C 0.006 3.994 27 C -0.125 4.125 28 H 0.227 0.773 29 H 0.131 0.869 30 H -0.181 1.181 31 H -0.182 1.182 32 H 0.147 0.853 33 H 0.150 0.850 34 H 0.176 0.824 35 H 0.230 0.770 36 H 0.107 0.893 37 H 0.100 0.900 38 H 0.140 0.860 39 H 0.141 0.859 40 H 0.140 0.860 41 H 0.140 0.860 42 H 0.137 0.863 43 H 0.097 0.903 44 H 0.108 0.892 45 H 0.255 0.745 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -1.299 -0.445 0.699 1.541 hybrid contribution -0.534 -1.160 0.833 1.524 sum -1.833 -1.605 1.532 2.878 Atomic orbital electron populations 1.86499 1.17078 1.81712 1.49346 1.25079 0.85240 1.10300 0.97290 0.94548 0.81084 0.77883 0.86998 1.20035 0.98332 0.93823 0.96791 1.20487 1.00904 0.99730 0.95371 1.20386 0.97709 0.92081 0.96700 1.18228 1.02748 0.94907 0.96265 1.20984 1.01589 0.90341 0.99684 1.20111 1.03373 0.96600 0.89592 1.17235 0.79111 0.81717 0.84673 1.90881 1.41462 1.83449 1.23324 1.45881 1.53125 1.11471 1.26411 1.22628 0.99712 0.82212 0.93605 0.86009 1.23464 1.00816 0.95516 0.97599 1.21326 0.94413 0.94781 0.98369 0.87748 1.19622 0.95387 0.94189 0.97841 1.21093 0.98000 0.94034 1.00187 1.21204 0.94085 1.00041 0.98155 1.21209 0.99234 0.95258 0.98443 1.21169 0.97688 0.94806 0.99922 1.20967 0.94109 0.99730 0.98832 1.23626 0.98070 0.94592 1.02043 1.41890 1.45165 1.11249 1.20039 1.18310 1.00010 0.84653 0.96471 1.19856 1.02590 0.94135 0.95908 0.77268 0.86880 1.18127 1.18205 0.85337 0.84987 0.82370 0.76994 0.89330 0.90043 0.85970 0.85931 0.86029 0.86044 0.86323 0.90257 0.89249 0.74534 0.85543 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.15 12.76 -35.23 -0.45 -0.30 16 2 C -0.07 0.04 2.81 36.01 0.10 0.15 16 3 Si 0.69 -0.93 29.75 -169.99 -5.06 -5.98 16 4 C -0.09 0.01 5.40 -104.57 -0.56 -0.55 16 5 C -0.15 0.07 8.59 -39.97 -0.34 -0.27 16 6 C -0.05 -0.01 10.06 -39.53 -0.40 -0.40 16 7 C -0.12 -0.18 6.16 -106.93 -0.66 -0.83 16 8 C -0.10 -0.18 10.53 -39.15 -0.41 -0.59 16 9 C 0.01 0.01 6.97 -82.29 -0.57 -0.56 16 10 C 0.59 1.04 7.80 -12.68 -0.10 0.94 16 11 O -0.52 -2.80 16.44 5.23 0.09 -2.71 16 12 N -0.72 0.97 5.35 -54.21 -0.29 0.68 16 13 C 0.12 -0.15 4.24 -67.12 -0.28 -0.44 16 14 H 0.12 0.03 7.46 -51.93 -0.39 -0.36 16 15 C -0.14 0.33 7.30 -25.92 -0.19 0.14 16 16 C -0.07 0.12 3.98 -90.96 -0.36 -0.25 16 17 H 0.10 -0.22 8.09 -51.93 -0.42 -0.64 16 18 C -0.07 0.02 5.29 -104.62 -0.55 -0.53 16 19 C -0.12 -0.01 9.71 -39.58 -0.38 -0.40 16 20 C -0.12 -0.02 10.05 -39.58 -0.40 -0.42 16 21 C -0.12 -0.02 10.05 -39.58 -0.40 -0.42 16 22 C -0.12 0.01 10.05 -39.58 -0.40 -0.39 16 23 C -0.12 0.05 8.61 -39.58 -0.34 -0.29 16 24 C -0.14 0.20 7.25 -25.92 -0.19 0.01 16 25 N -0.58 0.48 6.07 -7.35 -0.04 0.44 16 26 C 0.12 0.10 7.25 -83.97 -0.61 -0.51 16 27 C -0.10 -0.03 9.61 -39.42 -0.38 -0.41 16 28 H 0.38 -1.52 8.70 45.56 0.40 -1.12 16 29 H 0.11 -0.03 7.96 -51.93 -0.41 -0.45 16 30 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 31 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 32 H 0.13 -0.30 4.82 -52.49 -0.25 -0.55 16 33 H 0.13 -0.24 8.06 -52.49 -0.42 -0.66 16 34 H 0.16 0.19 8.06 -52.49 -0.42 -0.23 16 35 H 0.40 -1.59 7.78 -40.82 -0.32 -1.90 16 36 H 0.09 -0.26 7.70 -51.93 -0.40 -0.66 16 37 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 38 H 0.12 -0.16 8.05 -52.49 -0.42 -0.59 16 39 H 0.12 -0.16 8.06 -52.49 -0.42 -0.59 16 40 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 41 H 0.12 -0.20 8.06 -52.48 -0.42 -0.62 16 42 H 0.12 -0.25 6.66 -52.49 -0.35 -0.60 16 43 H 0.08 -0.05 8.14 -51.92 -0.42 -0.47 16 44 H 0.09 -0.15 6.31 -51.93 -0.33 -0.48 16 45 H 0.42 -1.62 8.12 -40.82 -0.33 -1.95 16 46 H 0.13 -0.08 8.06 -52.49 -0.42 -0.50 16 LS Contribution 382.57 15.07 5.77 5.77 Total: 0.00 -8.45 382.57 -13.23 -21.68 By element: Atomic # 1 Polarization: -7.73 SS G_CDS: -5.81 Total: -13.54 kcal Atomic # 6 Polarization: 1.40 SS G_CDS: -7.43 Total: -6.03 kcal Atomic # 7 Polarization: 1.45 SS G_CDS: -0.33 Total: 1.12 kcal Atomic # 8 Polarization: -2.64 SS G_CDS: -0.36 Total: -3.01 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: -5.06 Total: -5.98 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -8.45 -13.23 -21.68 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.431 kcal (2) G-P(sol) polarization free energy of solvation -8.452 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.980 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.228 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.680 kcal (6) G-S(sol) free energy of system = (1) + (5) 46.752 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds