Wall clock time and date at job start Sun Mar 7 2021 08:56:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42911 * 1 3 3 Si 1.86295 * 109.47006 * 2 1 4 4 C 1.50694 * 109.47222 * 120.00454 * 2 1 3 5 5 C 1.34699 * 125.66980 * 64.99498 * 4 2 1 6 6 C 1.40975 * 107.03123 * 179.97438 * 5 4 2 7 7 C 1.35938 * 106.74020 * 0.02562 * 6 5 4 8 8 C 1.47816 * 125.92553 * 180.02562 * 7 6 5 9 9 C 1.39175 * 119.99508 * 180.02562 * 8 7 6 10 10 C 1.39469 * 119.75895 * 179.97438 * 9 8 7 11 11 C 1.47559 * 120.12189 * 179.97438 * 10 9 8 12 12 O 1.21591 * 119.99864 * 180.02562 * 11 10 9 13 13 N 1.34771 * 120.00125 * 0.02562 * 11 10 9 14 14 C 1.46502 * 120.00096 * 180.02562 * 13 11 10 15 15 H 1.09010 * 112.84868 * 23.80319 * 14 13 11 16 16 C 1.53778 * 113.61904 * 154.99821 * 14 13 11 17 17 C 1.53777 * 87.08151 * 139.98058 * 16 14 13 18 18 H 1.08998 * 113.61666 * 89.20727 * 17 16 14 19 19 C 1.50707 * 113.61474 * 220.01968 * 17 16 14 20 20 C 1.38234 * 119.99635 * 59.72887 * 19 17 16 21 21 C 1.38237 * 119.99423 * 179.77031 * 20 19 17 22 22 C 1.38236 * 120.00287 * 0.50270 * 21 20 19 23 23 C 1.38231 * 119.99693 * 359.74779 * 22 21 20 24 24 C 1.38232 * 120.00374 * 0.02562 * 23 22 21 25 25 C 1.53770 * 87.08246 * 334.56892 * 17 16 14 26 26 C 1.40209 * 119.75032 * 0.02562 * 10 9 8 27 27 O 1.35649 * 119.99708 * 179.97438 * 26 10 9 28 28 C 1.38810 * 120.00262 * 359.97438 * 26 10 9 29 29 C 1.37779 * 120.24062 * 359.73377 * 28 26 10 30 30 O 1.34348 * 125.65875 * 245.00054 * 4 2 1 31 31 H 0.96697 * 113.99333 * 299.99405 * 1 2 3 32 32 H 1.09001 * 109.46668 * 239.99922 * 2 1 3 33 33 H 1.48510 * 110.00110 * 300.00211 * 3 2 1 34 34 H 1.48499 * 109.99974 * 61.31682 * 3 2 1 35 35 H 1.08003 * 126.48597 * 0.26589 * 5 4 2 36 36 H 1.08004 * 126.62875 * 180.02562 * 6 5 4 37 37 H 1.08008 * 120.12394 * 359.97438 * 9 8 7 38 38 H 0.97001 * 120.00695 * 359.97438 * 13 11 10 39 39 H 1.08999 * 113.61375 * 254.53371 * 16 14 13 40 40 H 1.09006 * 113.61458 * 25.34699 * 16 14 13 41 41 H 1.07999 * 120.00247 * 359.97438 * 20 19 17 42 42 H 1.08006 * 119.99878 * 180.23150 * 21 20 19 43 43 H 1.07994 * 120.00166 * 179.72891 * 22 21 20 44 44 H 1.08006 * 119.99801 * 179.97438 * 23 22 21 45 45 H 1.08002 * 120.00330 * 179.97438 * 24 23 22 46 46 H 1.09006 * 113.61930 * 270.88495 * 25 17 16 47 47 H 1.09005 * 113.61856 * 139.97947 * 25 17 16 48 48 H 0.96704 * 114.00142 * 89.99509 * 27 26 10 49 49 H 1.07997 * 119.88338 * 179.97438 * 28 26 10 50 50 H 1.08001 * 119.87315 * 180.27277 * 29 28 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 1.7572 -2.0167 1.5092 6 6 2.3825 -2.2613 2.7488 7 6 2.9088 -1.0780 3.1621 8 6 3.6601 -0.8534 4.4151 9 6 4.1455 0.4154 4.7174 10 6 4.8533 0.6219 5.9013 11 6 5.3721 1.9637 6.2294 12 8 5.9893 2.1411 7.2620 13 7 5.1619 2.9926 5.3848 14 6 5.6775 4.3247 5.7103 15 1 6.5250 4.2948 6.3953 16 6 5.9134 5.2125 4.4770 17 6 5.3500 6.3785 5.3062 18 1 6.1074 6.9122 5.8802 19 6 4.4540 7.3007 4.5201 20 6 3.3089 6.8082 3.9225 21 6 2.4846 7.6551 3.2054 22 6 2.8108 8.9923 3.0772 23 6 3.9586 9.4836 3.6704 24 6 4.7805 8.6378 4.3914 25 6 4.5844 5.3245 6.1231 26 6 5.0709 -0.4505 6.7778 27 8 5.7591 -0.2555 7.9304 28 6 4.5822 -1.7118 6.4663 29 6 3.8778 -1.9144 5.2996 30 8 2.6274 -0.1461 2.2313 31 1 -0.3932 0.4416 0.7651 32 1 1.7924 -0.5139 -0.8900 33 1 1.5615 2.4679 -1.2085 34 1 1.5879 2.4585 1.2242 35 1 1.2406 -2.7408 0.8966 36 1 2.4337 -3.2062 3.2694 37 1 3.9749 1.2372 4.0376 38 1 4.6699 2.8512 4.5609 39 1 6.9657 5.3292 4.2180 40 1 5.2941 4.9442 3.6210 41 1 3.0566 5.7625 4.0186 42 1 1.5879 7.2711 2.7416 43 1 2.1691 9.6530 2.5133 44 1 4.2137 10.5283 3.5698 45 1 5.6775 9.0216 4.8546 46 1 3.6006 5.0877 5.7178 47 1 4.5637 5.5317 7.1931 48 1 5.2040 -0.0098 8.6832 49 1 4.7513 -2.5366 7.1427 50 1 3.4964 -2.8972 5.0652 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_13259648.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:56:44 Heat of formation + Delta-G solvation = -5.913300 kcal Electronic energy + Delta-G solvation = -35344.199488 eV Core-core repulsion = 30656.803270 eV Total energy + Delta-G solvation = -4687.396218 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.150 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -43.75013 -41.75000 -41.00091 -39.68890 -38.54150 -38.23569 -37.82409 -34.82429 -34.21224 -32.83095 -32.56084 -31.85808 -31.42957 -30.09734 -26.79478 -26.49813 -26.43725 -25.01421 -23.73376 -23.55065 -23.04040 -22.37040 -21.64514 -21.28249 -20.50324 -19.54788 -19.17384 -18.35565 -18.24026 -17.65863 -17.50908 -17.10390 -16.73327 -16.64024 -16.45233 -16.21653 -15.90039 -15.88155 -15.79981 -15.39549 -15.24476 -14.78002 -14.54311 -14.38341 -14.33897 -14.20701 -14.02525 -13.92928 -13.84146 -13.61896 -13.56491 -13.27095 -13.17394 -13.11040 -12.94263 -12.59167 -12.36750 -12.12345 -11.88384 -11.82386 -11.71448 -11.49016 -11.11121 -10.86100 -10.74201 -10.50255 -10.33950 -10.02861 -9.84482 -9.57974 -8.95424 -5.07869 -0.59628 -0.25744 0.40364 0.47466 0.72697 1.04613 1.39678 1.44950 1.62963 1.84710 1.91573 2.06588 2.60010 2.80644 3.05991 3.09311 3.22923 3.37181 3.45953 3.55221 3.63281 3.66402 3.82346 3.85718 3.92974 3.95051 3.98871 4.07246 4.11766 4.12120 4.21471 4.26509 4.34217 4.50112 4.54476 4.56263 4.57706 4.61306 4.67358 4.72404 4.74340 4.78820 4.89919 4.94411 4.96744 5.04429 5.07347 5.10802 5.11598 5.18662 5.36420 5.40636 5.50329 5.55121 5.61402 5.69984 5.92248 6.07349 6.17710 6.43777 6.64433 7.19992 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.034 4.034 3 Si 0.696 3.304 4 C -0.050 4.050 5 C -0.169 4.169 6 C -0.188 4.188 7 C 0.036 3.964 8 C -0.034 4.034 9 C -0.054 4.054 10 C -0.164 4.164 11 C 0.561 3.439 12 O -0.516 6.516 13 N -0.718 5.718 14 C 0.124 3.876 15 H 0.120 0.880 16 C -0.136 4.136 17 C -0.071 4.071 18 H 0.103 0.897 19 C -0.069 4.069 20 C -0.118 4.118 21 C -0.118 4.118 22 C -0.124 4.124 23 C -0.117 4.117 24 C -0.115 4.115 25 C -0.145 4.145 26 C 0.180 3.820 27 O -0.475 6.475 28 C -0.148 4.148 29 C -0.053 4.053 30 O -0.166 6.166 31 H 0.380 0.620 32 H 0.137 0.863 33 H -0.248 1.248 34 H -0.254 1.254 35 H 0.154 0.846 36 H 0.154 0.846 37 H 0.135 0.865 38 H 0.399 0.601 39 H 0.080 0.920 40 H 0.089 0.911 41 H 0.119 0.881 42 H 0.120 0.880 43 H 0.121 0.879 44 H 0.122 0.878 45 H 0.122 0.878 46 H 0.088 0.912 47 H 0.077 0.923 48 H 0.400 0.600 49 H 0.146 0.854 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.227 -0.532 -1.855 2.287 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.144 4.144 3 Si 0.595 3.405 4 C -0.100 4.100 5 C -0.188 4.188 6 C -0.207 4.207 7 C -0.014 4.014 8 C -0.034 4.034 9 C -0.073 4.073 10 C -0.168 4.168 11 C 0.348 3.652 12 O -0.392 6.392 13 N -0.370 5.370 14 C 0.019 3.981 15 H 0.138 0.862 16 C -0.174 4.174 17 C -0.089 4.089 18 H 0.122 0.878 19 C -0.069 4.069 20 C -0.136 4.136 21 C -0.136 4.136 22 C -0.142 4.142 23 C -0.135 4.135 24 C -0.133 4.133 25 C -0.184 4.184 26 C 0.133 3.867 27 O -0.287 6.287 28 C -0.167 4.167 29 C -0.071 4.071 30 O -0.064 6.064 31 H 0.228 0.772 32 H 0.155 0.845 33 H -0.172 1.172 34 H -0.178 1.178 35 H 0.172 0.828 36 H 0.172 0.828 37 H 0.153 0.847 38 H 0.235 0.765 39 H 0.099 0.901 40 H 0.108 0.892 41 H 0.137 0.863 42 H 0.138 0.862 43 H 0.139 0.861 44 H 0.140 0.860 45 H 0.140 0.860 46 H 0.107 0.893 47 H 0.095 0.905 48 H 0.259 0.741 49 H 0.164 0.836 50 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -0.327 0.304 -1.961 2.011 hybrid contribution -1.839 -0.405 0.319 1.910 sum -2.166 -0.101 -1.642 2.720 Atomic orbital electron populations 1.86674 1.16681 1.80131 1.49202 1.24340 0.83984 1.12145 0.93909 0.94537 0.91413 0.73403 0.81104 1.22833 1.01154 0.93828 0.92159 1.21575 1.03652 0.95668 0.97891 1.21867 1.02804 0.98454 0.97605 1.20274 1.02974 0.87460 0.90693 1.17568 1.00274 0.94194 0.91412 1.21291 0.94383 0.96597 0.94992 1.20303 1.04440 0.94340 0.97725 1.18012 0.79607 0.83741 0.83803 1.90835 1.39577 1.84155 1.24628 1.45920 1.57850 1.08905 1.24338 1.22564 0.97831 0.79542 0.98134 0.86238 1.23464 1.02546 0.94402 0.97014 1.21327 0.97435 0.93412 0.96758 0.87832 1.19638 0.95382 0.93971 0.97927 1.20978 0.94741 0.99697 0.98185 1.21160 0.99552 0.93896 0.99030 1.21195 0.97344 0.95711 0.99947 1.21196 0.94897 0.99867 0.97553 1.21091 0.99788 0.93086 0.99355 1.23621 0.98732 0.94880 1.01125 1.18603 0.89251 0.90855 0.87965 1.84750 1.35182 1.90950 1.17801 1.21401 0.99240 0.97339 0.98707 1.21126 0.95565 0.98407 0.92004 1.83924 1.57923 1.37963 1.26551 0.77157 0.84515 1.17214 1.17823 0.82795 0.82785 0.84744 0.76540 0.90082 0.89243 0.86279 0.86164 0.86088 0.85964 0.85976 0.89318 0.90466 0.74142 0.83632 0.84219 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.03 12.88 -35.23 -0.45 -0.43 16 2 C -0.03 0.04 2.98 36.00 0.11 0.15 16 3 Si 0.70 -1.21 32.11 -169.99 -5.46 -6.66 16 4 C -0.05 0.00 6.20 -35.56 -0.22 -0.22 16 5 C -0.17 -0.02 10.78 -39.80 -0.43 -0.45 16 6 C -0.19 0.04 10.26 -39.37 -0.40 -0.36 16 7 C 0.04 0.01 7.03 -36.49 -0.26 -0.25 16 8 C -0.03 0.01 5.87 -105.03 -0.62 -0.61 16 9 C -0.05 0.02 9.20 -38.78 -0.36 -0.33 16 10 C -0.16 -0.18 5.88 -104.90 -0.62 -0.80 16 11 C 0.56 1.32 7.76 -12.46 -0.10 1.23 16 12 O -0.52 -2.95 14.74 -16.67 -0.25 -3.20 16 13 N -0.72 0.27 5.30 -54.05 -0.29 -0.01 16 14 C 0.12 -0.06 4.24 -67.12 -0.28 -0.35 16 15 H 0.12 0.12 7.46 -51.92 -0.39 -0.26 16 16 C -0.14 0.24 7.29 -25.92 -0.19 0.05 16 17 C -0.07 0.08 3.98 -90.96 -0.36 -0.28 16 18 H 0.10 -0.17 8.09 -51.93 -0.42 -0.59 16 19 C -0.07 -0.01 5.29 -104.62 -0.55 -0.57 16 20 C -0.12 -0.02 8.60 -39.58 -0.34 -0.36 16 21 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 22 C -0.12 -0.07 10.05 -39.58 -0.40 -0.46 16 23 C -0.12 -0.06 10.05 -39.59 -0.40 -0.46 16 24 C -0.12 -0.05 9.71 -39.58 -0.38 -0.43 16 25 C -0.14 0.12 7.25 -25.93 -0.19 -0.07 16 26 C 0.18 0.20 6.72 -38.63 -0.26 -0.06 16 27 O -0.48 -0.90 11.55 -40.60 -0.47 -1.36 16 28 C -0.15 0.13 9.96 -39.54 -0.39 -0.26 16 29 C -0.05 0.07 9.54 -39.15 -0.37 -0.30 16 30 O -0.17 -0.06 8.80 4.55 0.04 -0.02 16 31 H 0.38 -1.05 8.70 45.56 0.40 -0.65 16 32 H 0.14 -0.36 7.96 -51.93 -0.41 -0.77 16 33 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 34 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 35 H 0.15 -0.14 8.06 -52.48 -0.42 -0.57 16 36 H 0.15 -0.36 7.25 -52.48 -0.38 -0.74 16 37 H 0.13 -0.30 6.24 -52.48 -0.33 -0.63 16 38 H 0.40 -1.03 6.75 -40.82 -0.28 -1.31 16 39 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 40 H 0.09 -0.21 7.69 -51.93 -0.40 -0.61 16 41 H 0.12 -0.15 6.68 -52.49 -0.35 -0.50 16 42 H 0.12 -0.12 8.06 -52.48 -0.42 -0.55 16 43 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 44 H 0.12 -0.13 8.06 -52.48 -0.42 -0.55 16 45 H 0.12 -0.13 8.05 -52.49 -0.42 -0.55 16 46 H 0.09 -0.09 6.32 -51.93 -0.33 -0.42 16 47 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 48 H 0.40 -0.73 9.06 45.56 0.41 -0.32 16 49 H 0.15 -0.39 8.06 -52.49 -0.42 -0.81 16 50 H 0.14 -0.50 6.96 -52.49 -0.37 -0.86 16 LS Contribution 422.08 15.07 6.36 6.36 Total: 0.00 -9.38 422.08 -13.34 -22.72 By element: Atomic # 1 Polarization: -6.35 SS G_CDS: -5.42 Total: -11.77 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -7.41 Total: -5.62 kcal Atomic # 7 Polarization: 0.27 SS G_CDS: -0.29 Total: -0.01 kcal Atomic # 8 Polarization: -3.88 SS G_CDS: -1.13 Total: -5.01 kcal Atomic # 14 Polarization: -1.21 SS G_CDS: -5.46 Total: -6.66 kcal Total LS contribution 6.36 Total: 6.36 kcal Total: -9.38 -13.34 -22.72 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_13259648.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.808 kcal (2) G-P(sol) polarization free energy of solvation -9.380 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.429 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.342 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.722 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.913 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds