Wall clock time and date at job start Sun Mar 7 2021 08:56:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86299 * 109.47588 * 2 1 4 4 C 1.50696 * 109.47238 * 239.99652 * 2 1 3 5 5 C 1.34196 * 126.54395 * 105.02949 * 4 2 1 6 6 N 1.36863 * 109.97027 * 179.97438 * 5 4 2 7 7 C 1.37392 * 109.98190 * 359.97438 * 6 5 4 8 8 C 1.39329 * 133.25571 * 179.97438 * 7 6 5 9 9 C 1.36356 * 120.24214 * 179.76605 * 8 7 6 10 10 C 1.40169 * 120.66308 * 0.52258 * 9 8 7 11 11 C 1.47656 * 119.97157 * 179.75186 * 10 9 8 12 12 O 1.21577 * 120.00281 * 179.72101 * 11 10 9 13 13 N 1.34785 * 119.99727 * 359.72860 * 11 10 9 14 14 C 1.46498 * 119.99454 * 179.97438 * 13 11 10 15 15 H 1.08999 * 112.85415 * 23.80030 * 14 13 11 16 16 C 1.53777 * 113.61124 * 155.00165 * 14 13 11 17 17 C 1.53775 * 87.08433 * 140.06236 * 16 14 13 18 18 H 1.08999 * 113.61752 * 89.19529 * 17 16 14 19 19 C 1.50703 * 113.61931 * 220.01654 * 17 16 14 20 20 C 1.38234 * 120.00277 * 240.00280 * 19 17 16 21 21 C 1.38230 * 119.99885 * 179.97438 * 20 19 17 22 22 C 1.38235 * 120.00326 * 359.97438 * 21 20 19 23 23 C 1.38234 * 119.99814 * 359.97438 * 22 21 20 24 24 C 1.38235 * 119.99539 * 59.97375 * 19 17 16 25 25 C 1.53777 * 87.08273 * 334.56585 * 17 16 14 26 26 C 1.39181 * 120.05474 * 359.48085 * 10 9 8 27 27 C 1.39230 * 119.39325 * 0.25163 * 26 10 9 28 28 H 0.96696 * 113.99942 * 300.00502 * 1 2 3 29 29 H 1.09001 * 109.46909 * 120.00236 * 2 1 3 30 30 H 1.48506 * 109.99653 * 299.99862 * 3 2 1 31 31 H 1.48490 * 109.99850 * 61.31466 * 3 2 1 32 32 H 1.08002 * 125.01135 * 359.97438 * 5 4 2 33 33 H 0.97006 * 125.00493 * 180.02562 * 6 5 4 34 34 H 1.08008 * 119.88089 * 0.05395 * 8 7 6 35 35 H 1.07999 * 119.66966 * 180.27839 * 9 8 7 36 36 H 0.96992 * 120.00114 * 359.97438 * 13 11 10 37 37 H 1.08999 * 113.62068 * 25.51049 * 16 14 13 38 38 H 1.09003 * 113.69391 * 254.62030 * 16 14 13 39 39 H 1.07992 * 119.99701 * 359.97271 * 20 19 17 40 40 H 1.08000 * 120.00356 * 179.97438 * 21 20 19 41 41 H 1.08000 * 120.00616 * 179.70664 * 22 21 20 42 42 H 1.08001 * 120.00279 * 180.02562 * 23 22 21 43 43 H 1.07997 * 120.00440 * 0.02562 * 24 19 17 44 44 H 1.08996 * 113.61915 * 139.97608 * 25 17 16 45 45 H 1.09005 * 113.61467 * 270.88939 * 25 17 16 46 46 H 1.08009 * 120.30585 * 180.27549 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.4613 -0.1389 -2.3227 6 7 2.8036 -1.1007 -3.2342 7 6 2.4964 -2.3456 -2.7408 8 6 2.6351 -3.6352 -3.2497 9 6 2.2359 -4.7109 -2.5129 10 6 1.6719 -4.5369 -1.2416 11 6 1.2398 -5.7122 -0.4591 12 8 0.7551 -5.5623 0.6457 13 7 1.3828 -6.9514 -0.9698 14 6 0.9546 -8.1175 -0.1932 15 1 0.1940 -7.8756 0.5491 16 6 0.6042 -9.3391 -1.0590 17 6 1.2989 -10.1980 0.0107 18 1 0.6321 -10.5262 0.8081 19 6 2.1256 -11.3213 -0.5602 20 6 1.8302 -12.6318 -0.2341 21 6 2.5881 -13.6621 -0.7582 22 6 3.6412 -13.3821 -1.6088 23 6 3.9359 -12.0718 -1.9357 24 6 3.1789 -11.0412 -1.4104 25 6 2.1208 -8.9483 0.3679 26 6 1.5239 -3.2576 -0.7138 27 6 1.9358 -2.1579 -1.4618 28 1 -0.3933 0.4418 0.7650 29 1 1.7923 -0.5139 0.8900 30 1 1.5616 2.4678 -1.2086 31 1 1.5880 2.4585 1.2241 32 1 2.5975 0.9235 -2.4620 33 1 3.2048 -0.9288 -4.1005 34 1 3.0647 -3.7838 -4.2295 35 1 2.3519 -5.7067 -2.9145 36 1 1.7692 -7.0710 -1.8514 37 1 1.1103 -9.3500 -2.0242 38 1 -0.4667 -9.5254 -1.1406 39 1 1.0073 -12.8505 0.4302 40 1 2.3576 -14.6860 -0.5031 41 1 4.2364 -14.1868 -2.0146 42 1 4.7584 -11.8529 -2.6007 43 1 3.4097 -10.0175 -1.6653 44 1 2.2741 -8.8179 1.4391 45 1 3.0417 -8.8523 -0.2074 46 1 1.0939 -3.1191 0.2673 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:56:47 Heat of formation + Delta-G solvation = 48.378918 kcal Electronic energy + Delta-G solvation = -28735.953662 eV Core-core repulsion = 24751.076344 eV Total energy + Delta-G solvation = -3984.877317 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.146 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -42.44236 -41.41527 -40.25195 -38.73640 -37.85914 -37.36939 -34.64488 -33.34464 -31.92135 -31.70782 -30.76608 -30.35772 -26.72433 -26.44914 -26.27650 -24.47133 -23.56742 -23.44766 -22.34028 -21.40750 -20.70317 -20.20978 -19.05702 -18.42041 -18.32092 -18.15357 -17.28168 -16.98613 -16.43287 -16.08870 -15.94765 -15.75530 -15.53008 -15.35298 -15.19983 -14.97285 -14.75269 -14.73416 -14.31462 -14.17323 -14.13847 -13.87710 -13.77617 -13.50139 -13.37910 -13.12006 -12.73096 -12.55594 -12.48957 -12.30304 -12.10525 -11.79332 -11.77031 -11.66807 -11.42504 -10.74242 -10.73678 -10.34270 -9.96828 -9.80297 -9.53641 -9.28205 -8.79310 -4.96989 -0.01469 0.22504 0.44716 0.51648 1.29278 1.48848 1.58150 1.93637 2.01472 2.03004 2.24723 2.84713 2.99097 3.45810 3.50727 3.61880 3.68042 3.73605 3.73804 3.85596 3.93587 3.95876 4.03454 4.11643 4.14075 4.17054 4.25489 4.28732 4.40717 4.52120 4.55491 4.60716 4.61490 4.67638 4.73565 4.79599 4.82244 4.96735 5.02210 5.04774 5.10068 5.16005 5.24820 5.29870 5.40774 5.52538 5.59132 5.63173 5.63387 5.65674 5.75026 6.01433 6.11577 6.39769 6.56065 6.60740 7.36729 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.043 4.043 3 Si 0.683 3.317 4 C -0.145 4.145 5 C 0.064 3.936 6 N -0.585 5.585 7 C 0.119 3.881 8 C -0.133 4.133 9 C -0.067 4.067 10 C -0.170 4.170 11 C 0.566 3.434 12 O -0.539 6.539 13 N -0.719 5.719 14 C 0.124 3.876 15 H 0.118 0.882 16 C -0.136 4.136 17 C -0.071 4.071 18 H 0.103 0.897 19 C -0.069 4.069 20 C -0.116 4.116 21 C -0.118 4.118 22 C -0.125 4.125 23 C -0.118 4.118 24 C -0.118 4.118 25 C -0.145 4.145 26 C 0.008 3.992 27 C -0.102 4.102 28 H 0.378 0.622 29 H 0.074 0.926 30 H -0.255 1.255 31 H -0.259 1.259 32 H 0.176 0.824 33 H 0.422 0.578 34 H 0.128 0.872 35 H 0.128 0.872 36 H 0.399 0.601 37 H 0.088 0.912 38 H 0.079 0.921 39 H 0.122 0.878 40 H 0.122 0.878 41 H 0.121 0.879 42 H 0.121 0.879 43 H 0.121 0.879 44 H 0.076 0.924 45 H 0.089 0.911 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.442 0.558 -3.738 5.832 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.153 4.153 3 Si 0.584 3.416 4 C -0.152 4.152 5 C -0.063 4.063 6 N -0.187 5.187 7 C 0.010 3.990 8 C -0.154 4.154 9 C -0.087 4.087 10 C -0.174 4.174 11 C 0.355 3.645 12 O -0.416 6.416 13 N -0.370 5.370 14 C 0.019 3.981 15 H 0.136 0.864 16 C -0.174 4.174 17 C -0.090 4.090 18 H 0.121 0.879 19 C -0.069 4.069 20 C -0.134 4.134 21 C -0.136 4.136 22 C -0.143 4.143 23 C -0.136 4.136 24 C -0.136 4.136 25 C -0.183 4.183 26 C -0.011 4.011 27 C -0.107 4.107 28 H 0.225 0.775 29 H 0.092 0.908 30 H -0.179 1.179 31 H -0.184 1.184 32 H 0.193 0.807 33 H 0.259 0.741 34 H 0.146 0.854 35 H 0.145 0.855 36 H 0.235 0.765 37 H 0.107 0.893 38 H 0.098 0.902 39 H 0.140 0.860 40 H 0.140 0.860 41 H 0.139 0.861 42 H 0.139 0.861 43 H 0.138 0.862 44 H 0.095 0.905 45 H 0.108 0.892 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 4.015 1.264 -3.602 5.540 hybrid contribution -0.679 -0.229 -0.430 0.836 sum 3.336 1.035 -4.032 5.335 Atomic orbital electron populations 1.86634 1.18088 1.80018 1.49522 1.24077 0.84069 1.10003 0.97123 0.95265 0.91418 0.74336 0.80623 1.19522 1.07872 0.91204 0.96593 1.21676 1.01167 0.94359 0.89076 1.41703 1.54758 1.04123 1.18091 1.18415 0.99941 0.86530 0.94071 1.19660 1.05818 0.88817 1.01070 1.20569 0.96812 0.98295 0.93022 1.19542 1.08223 0.93264 0.96362 1.18220 0.77665 0.82964 0.85674 1.90784 1.44492 1.86082 1.20260 1.45868 1.64516 1.05557 1.21032 1.22526 0.97687 0.83004 0.94893 0.86402 1.23453 1.01758 0.94104 0.98075 1.21336 0.97287 0.91962 0.98445 0.87918 1.19649 0.96012 0.93946 0.97280 1.21088 0.99881 0.92204 1.00226 1.21189 0.95702 0.99259 0.97410 1.21195 0.97824 0.96783 0.98472 1.21165 0.99644 0.92898 0.99893 1.20992 0.95639 0.99172 0.97777 1.23620 0.98142 0.94103 1.02458 1.20663 0.92438 0.89220 0.98801 1.18921 1.04469 0.92901 0.94381 0.77467 0.90777 1.17935 1.18411 0.80660 0.74052 0.85423 0.85467 0.76492 0.89314 0.90246 0.86033 0.86018 0.86108 0.86066 0.86160 0.90501 0.89244 0.84516 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.26 12.86 -35.23 -0.45 -1.71 16 2 C -0.04 -0.03 3.05 36.00 0.11 0.08 16 3 Si 0.68 -0.83 30.80 -169.99 -5.23 -6.07 16 4 C -0.14 -0.26 5.61 -102.68 -0.58 -0.84 16 5 C 0.06 -0.03 10.43 -16.73 -0.17 -0.20 16 6 N -0.58 0.66 6.05 -10.61 -0.06 0.59 16 7 C 0.12 0.14 7.27 -83.96 -0.61 -0.47 16 8 C -0.13 0.04 10.00 -39.85 -0.40 -0.36 16 9 C -0.07 0.01 9.46 -39.53 -0.37 -0.37 16 10 C -0.17 -0.44 5.87 -104.98 -0.62 -1.06 16 11 C 0.57 2.04 7.76 -12.41 -0.10 1.94 16 12 O -0.54 -3.97 15.93 5.30 0.08 -3.88 16 13 N -0.72 -0.24 5.31 -54.02 -0.29 -0.52 16 14 C 0.12 0.03 4.24 -67.12 -0.28 -0.26 16 15 H 0.12 0.22 7.46 -51.93 -0.39 -0.16 16 16 C -0.14 0.17 7.30 -25.92 -0.19 -0.02 16 17 C -0.07 0.05 3.98 -90.96 -0.36 -0.31 16 18 H 0.10 -0.11 8.09 -51.93 -0.42 -0.53 16 19 C -0.07 -0.03 5.29 -104.62 -0.55 -0.59 16 20 C -0.12 -0.08 9.71 -39.59 -0.38 -0.47 16 21 C -0.12 -0.08 10.05 -39.59 -0.40 -0.48 16 22 C -0.12 -0.08 10.05 -39.58 -0.40 -0.47 16 23 C -0.12 -0.05 10.05 -39.58 -0.40 -0.44 16 24 C -0.12 -0.03 8.61 -39.58 -0.34 -0.37 16 25 C -0.14 0.04 7.26 -25.92 -0.19 -0.15 16 26 C 0.01 0.03 9.64 -38.86 -0.37 -0.34 16 27 C -0.10 -0.31 6.34 -105.15 -0.67 -0.98 16 28 H 0.38 -0.64 8.74 45.56 0.40 -0.24 16 29 H 0.07 -0.01 7.96 -51.93 -0.41 -0.42 16 30 H -0.25 -0.28 7.04 56.52 0.40 0.12 16 31 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 32 H 0.18 -0.55 6.30 -52.49 -0.33 -0.88 16 33 H 0.42 -1.84 8.96 -40.82 -0.37 -2.21 16 34 H 0.13 -0.36 8.06 -52.48 -0.42 -0.78 16 35 H 0.13 -0.40 6.36 -52.49 -0.33 -0.73 16 36 H 0.40 -0.94 6.73 -40.82 -0.27 -1.21 16 37 H 0.09 -0.17 7.70 -51.93 -0.40 -0.57 16 38 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 39 H 0.12 -0.08 8.05 -52.49 -0.42 -0.51 16 40 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 41 H 0.12 -0.11 8.06 -52.49 -0.42 -0.54 16 42 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 43 H 0.12 -0.17 6.66 -52.49 -0.35 -0.52 16 44 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 45 H 0.09 -0.06 6.31 -51.93 -0.33 -0.39 16 46 H 0.14 0.62 7.64 -52.48 -0.40 0.22 16 LS Contribution 382.55 15.07 5.76 5.76 Total: 0.00 -10.01 382.55 -13.23 -23.24 By element: Atomic # 1 Polarization: -5.48 SS G_CDS: -5.77 Total: -11.25 kcal Atomic # 6 Polarization: 1.11 SS G_CDS: -7.27 Total: -6.16 kcal Atomic # 7 Polarization: 0.42 SS G_CDS: -0.35 Total: 0.07 kcal Atomic # 8 Polarization: -5.23 SS G_CDS: -0.37 Total: -5.59 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.23 Total: -6.07 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -10.01 -13.23 -23.24 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.619 kcal (2) G-P(sol) polarization free energy of solvation -10.010 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 61.609 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.230 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.240 kcal (6) G-S(sol) free energy of system = (1) + (5) 48.379 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds