Wall clock time and date at job start Sun Mar 7 2021 08:56:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38985 * 119.95126 * 2 1 4 4 O 1.35709 * 119.91207 * 0.02562 * 3 2 1 5 5 C 1.39013 * 120.17165 * 180.02562 * 3 2 1 6 6 C 1.50703 * 119.94961 * 179.97438 * 5 3 2 7 7 O 1.42900 * 109.47423 * 285.02333 * 6 5 3 8 8 Si 1.86305 * 109.46812 * 165.02824 * 6 5 3 9 9 C 1.37681 * 120.09278 * 359.97438 * 5 3 2 10 10 C 1.39752 * 119.90903 * 0.27786 * 9 5 3 11 11 C 1.47606 * 120.08659 * 179.70114 * 10 9 5 12 12 O 1.21580 * 119.99962 * 359.97438 * 11 10 9 13 13 N 1.34779 * 119.99822 * 179.97438 * 11 10 9 14 14 C 1.46503 * 119.99726 * 180.02562 * 13 11 10 15 15 H 1.08999 * 112.84825 * 334.66878 * 14 13 11 16 16 C 1.53776 * 113.61357 * 105.86537 * 14 13 11 17 17 C 1.53954 * 87.01810 * 139.95072 * 16 14 13 18 18 H 1.08997 * 113.53749 * 89.18807 * 17 16 14 19 19 C 1.50699 * 113.74291 * 220.05480 * 17 16 14 20 20 C 1.38238 * 119.99952 * 37.32162 * 19 17 16 21 21 C 1.38233 * 119.99947 * 179.73976 * 20 19 17 22 22 C 1.38234 * 120.00221 * 0.53919 * 21 20 19 23 23 C 1.38241 * 119.99738 * 359.73810 * 22 21 20 24 24 C 1.38232 * 119.99836 * 359.97438 * 23 22 21 25 25 C 1.53779 * 87.11337 * 334.63568 * 17 16 14 26 26 C 1.37724 * 119.95931 * 180.02562 * 2 1 3 27 27 H 1.08996 * 109.47173 * 90.00358 * 1 2 3 28 28 H 1.09004 * 109.46964 * 209.99738 * 1 2 3 29 29 H 1.08996 * 109.47628 * 329.99830 * 1 2 3 30 30 H 0.96700 * 113.99870 * 270.02369 * 4 3 2 31 31 H 1.08998 * 109.47326 * 45.03108 * 6 5 3 32 32 H 0.96699 * 114.00401 * 300.00498 * 7 6 5 33 33 H 1.48493 * 109.99997 * 180.02562 * 8 6 5 34 34 H 1.48505 * 109.99824 * 301.31849 * 8 6 5 35 35 H 1.08002 * 120.04241 * 179.97438 * 9 5 3 36 36 H 0.96998 * 120.00040 * 0.02562 * 13 11 10 37 37 H 1.09000 * 113.61624 * 254.52527 * 16 14 13 38 38 H 1.09002 * 113.61904 * 25.43118 * 16 14 13 39 39 H 1.08003 * 119.99929 * 0.02562 * 20 19 17 40 40 H 1.07999 * 120.00250 * 180.29678 * 21 20 19 41 41 H 1.07995 * 120.00390 * 179.76412 * 22 21 20 42 42 H 1.08005 * 120.00026 * 180.02562 * 23 22 21 43 43 H 1.08008 * 119.99819 * 179.97438 * 24 23 22 44 44 H 1.08995 * 113.61607 * 270.81486 * 25 17 16 45 45 H 1.08994 * 113.61600 * 139.90669 * 25 17 16 46 46 H 1.07997 * 120.04051 * 359.97438 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2009 1.2042 0.0000 4 8 1.5195 2.3779 0.0005 5 6 3.5910 1.2096 -0.0005 6 6 4.3383 2.5183 -0.0011 7 8 4.2708 3.1048 -1.3024 8 14 6.1200 2.2161 0.4520 9 6 4.2859 0.0210 -0.0005 10 6 3.5919 -1.1920 -0.0059 11 6 4.3329 -2.4685 -0.0126 12 8 5.5487 -2.4656 -0.0139 13 7 3.6618 -3.6373 -0.0172 14 6 4.3973 -4.9043 -0.0232 15 1 5.3947 -4.8126 -0.4533 16 6 4.3744 -5.6363 1.3289 17 6 4.2050 -6.9407 0.5288 18 1 5.1503 -7.4066 0.2507 19 6 3.2344 -7.9117 1.1500 20 6 2.0914 -7.4444 1.7715 21 6 1.1984 -8.3355 2.3365 22 6 1.4537 -9.6932 2.2899 23 6 2.5995 -10.1602 1.6734 24 6 3.4896 -9.2695 1.1031 25 6 3.5884 -6.0834 -0.5891 26 6 2.1947 -1.1932 -0.0005 27 1 -0.3633 -0.0001 -1.0276 28 1 -0.3633 -0.8900 0.5138 29 1 -0.3634 0.8899 0.5138 30 1 1.3214 2.7180 -0.8827 31 1 3.8882 3.1941 0.7259 32 1 4.6540 2.5571 -2.0012 33 1 6.8678 3.4990 0.4556 34 1 6.2023 1.5770 1.7900 35 1 5.3659 0.0261 -0.0014 36 1 2.6918 -3.6396 -0.0165 37 1 5.3166 -5.5765 1.8738 38 1 3.5110 -5.3872 1.9458 39 1 1.8940 -6.3833 1.8115 40 1 0.3030 -7.9707 2.8179 41 1 0.7579 -10.3892 2.7346 42 1 2.7988 -11.2211 1.6365 43 1 4.3850 -9.6344 0.6218 44 1 2.5097 -5.9568 -0.4976 45 1 3.8969 -6.3840 -1.5903 46 1 1.6548 -2.1285 -0.0005 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16147626_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:56:54 Heat of formation + Delta-G solvation = -32.487965 kcal Electronic energy + Delta-G solvation = -28494.823172 eV Core-core repulsion = 24509.635204 eV Total energy + Delta-G solvation = -3985.187968 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.151 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.83386 -41.15469 -40.15392 -38.69709 -37.84426 -37.47020 -34.89821 -33.95723 -32.18087 -31.76899 -31.22137 -27.99205 -27.00659 -26.69095 -26.24439 -24.51767 -23.55312 -22.43213 -21.95607 -21.51791 -20.33265 -19.55504 -18.65425 -18.27433 -17.98967 -17.24698 -16.75408 -16.64805 -16.29287 -16.12827 -16.03989 -15.96115 -15.58279 -15.29772 -15.11068 -14.66986 -14.40292 -14.27489 -14.21830 -14.14424 -13.92869 -13.85189 -13.43672 -13.31460 -13.13962 -12.93004 -12.77008 -12.51548 -12.35469 -12.28583 -12.23366 -11.79669 -11.64912 -11.61786 -11.44342 -11.01362 -10.50318 -10.16401 -9.96433 -9.79887 -9.65322 -9.52727 -5.07611 -0.40277 0.07245 0.44964 0.52084 1.19575 1.52627 1.62875 1.85477 2.06766 2.55834 2.85662 3.13427 3.38340 3.46724 3.54091 3.57560 3.70057 3.73550 3.75967 3.95236 4.02375 4.07228 4.16101 4.17870 4.20339 4.30993 4.36389 4.43988 4.57872 4.63073 4.64248 4.70233 4.73932 4.76202 4.80673 4.85535 4.99014 5.03797 5.04460 5.07772 5.12533 5.18636 5.20113 5.23756 5.32261 5.52683 5.60102 5.60930 5.66482 5.76036 6.14469 6.46389 6.68248 6.71620 7.12872 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.121 4.121 3 C 0.153 3.847 4 O -0.500 6.500 5 C -0.159 4.159 6 C -0.051 4.051 7 O -0.546 6.546 8 Si 0.748 3.252 9 C -0.056 4.056 10 C -0.150 4.150 11 C 0.560 3.440 12 O -0.573 6.573 13 N -0.701 5.701 14 C 0.121 3.879 15 H 0.103 0.897 16 C -0.144 4.144 17 C -0.068 4.068 18 H 0.105 0.895 19 C -0.076 4.076 20 C -0.125 4.125 21 C -0.129 4.129 22 C -0.139 4.139 23 C -0.131 4.131 24 C -0.130 4.130 25 C -0.121 4.121 26 C -0.055 4.055 27 H 0.086 0.914 28 H 0.085 0.915 29 H 0.067 0.933 30 H 0.413 0.587 31 H 0.107 0.893 32 H 0.395 0.605 33 H -0.287 1.287 34 H -0.298 1.298 35 H 0.142 0.858 36 H 0.414 0.586 37 H 0.064 0.936 38 H 0.095 0.905 39 H 0.136 0.864 40 H 0.135 0.865 41 H 0.131 0.869 42 H 0.132 0.868 43 H 0.131 0.869 44 H 0.101 0.899 45 H 0.085 0.915 46 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.344 -3.927 -3.667 7.578 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.122 4.122 3 C 0.107 3.893 4 O -0.314 6.314 5 C -0.160 4.160 6 C -0.162 4.162 7 O -0.354 6.354 8 Si 0.654 3.346 9 C -0.075 4.075 10 C -0.153 4.153 11 C 0.348 3.652 12 O -0.454 6.454 13 N -0.352 5.352 14 C 0.016 3.984 15 H 0.121 0.879 16 C -0.182 4.182 17 C -0.087 4.087 18 H 0.123 0.877 19 C -0.076 4.076 20 C -0.142 4.142 21 C -0.147 4.147 22 C -0.157 4.157 23 C -0.149 4.149 24 C -0.148 4.148 25 C -0.159 4.159 26 C -0.073 4.073 27 H 0.105 0.895 28 H 0.104 0.896 29 H 0.086 0.914 30 H 0.274 0.726 31 H 0.125 0.875 32 H 0.245 0.755 33 H -0.214 1.214 34 H -0.225 1.225 35 H 0.159 0.841 36 H 0.253 0.747 37 H 0.083 0.917 38 H 0.114 0.886 39 H 0.154 0.846 40 H 0.153 0.847 41 H 0.149 0.851 42 H 0.150 0.850 43 H 0.149 0.851 44 H 0.120 0.880 45 H 0.104 0.896 46 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -4.110 -3.343 -2.200 5.736 hybrid contribution -0.675 0.213 0.064 0.711 sum -4.785 -3.130 -2.136 6.104 Atomic orbital electron populations 1.20765 0.88334 1.04038 1.03724 1.20446 0.98310 0.91748 1.01672 1.18492 0.88799 0.85914 0.96061 1.84626 1.75529 1.35810 1.35418 1.20609 0.94229 0.95659 1.05465 1.24763 1.08996 0.93002 0.89459 1.86471 1.84801 1.47836 1.16291 0.94016 0.75900 0.80476 0.84176 1.21007 1.00030 0.90657 0.95760 1.19838 0.94308 0.92763 1.08420 1.18372 0.86856 0.84530 0.75410 1.90785 1.15044 1.88072 1.51496 1.45793 1.10848 1.04622 1.73943 1.22540 0.97324 0.81171 0.97384 0.87898 1.23640 1.03070 0.94568 0.96954 1.21337 0.98055 0.92730 0.96550 0.87679 1.19804 0.95667 0.93884 0.98292 1.21217 0.94154 1.00468 0.98388 1.21435 1.00032 0.93544 0.99692 1.21450 0.97936 0.96352 0.99935 1.21428 0.94795 1.00522 0.98165 1.21324 1.00157 0.93101 1.00248 1.23387 1.00804 0.92851 0.98896 1.21369 0.91748 0.98959 0.95242 0.89532 0.89637 0.91390 0.72646 0.87527 0.75476 1.21407 1.22491 0.84121 0.74710 0.91694 0.88645 0.84615 0.84706 0.85090 0.85049 0.85135 0.88022 0.89619 0.81953 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.72 9.78 71.24 0.70 1.42 16 2 C -0.12 0.32 5.89 -19.81 -0.12 0.20 16 3 C 0.15 0.10 6.66 22.63 0.15 0.25 16 4 O -0.50 -0.04 11.84 -90.30 -1.07 -1.11 16 5 C -0.16 -0.25 5.27 -19.81 -0.10 -0.36 16 6 C -0.05 -0.09 2.37 71.24 0.17 0.08 16 7 O -0.55 0.12 12.88 -148.98 -1.92 -1.80 16 8 Si 0.75 1.91 29.91 68.60 2.05 3.96 16 9 C -0.06 -0.13 8.20 22.50 0.18 0.05 16 10 C -0.15 -0.13 5.87 -20.08 -0.12 -0.25 16 11 C 0.56 1.89 7.76 86.72 0.67 2.56 16 12 O -0.57 -6.53 15.96 -3.97 -0.06 -6.59 16 13 N -0.70 2.30 5.31 -443.13 -2.35 -0.05 16 14 C 0.12 -0.31 4.21 45.52 0.19 -0.12 16 15 H 0.10 0.14 7.50 -2.39 -0.02 0.12 16 16 C -0.14 0.35 7.27 31.18 0.23 0.58 16 17 C -0.07 0.24 3.97 -10.96 -0.04 0.20 16 18 H 0.11 -0.42 8.09 -2.39 -0.02 -0.44 16 19 C -0.08 0.07 5.29 -19.87 -0.11 -0.04 16 20 C -0.12 0.20 8.63 22.27 0.19 0.39 16 21 C -0.13 0.09 10.05 22.27 0.22 0.31 16 22 C -0.14 -0.04 10.05 22.27 0.22 0.18 16 23 C -0.13 -0.08 10.05 22.27 0.22 0.15 16 24 C -0.13 -0.04 9.71 22.27 0.22 0.18 16 25 C -0.12 0.73 7.30 31.12 0.23 0.96 16 26 C -0.05 0.23 9.18 22.50 0.21 0.43 16 27 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 28 H 0.08 -0.78 8.08 -2.38 -0.02 -0.80 16 29 H 0.07 -0.27 7.52 -2.39 -0.02 -0.29 16 30 H 0.41 -2.92 9.06 -74.06 -0.67 -3.59 16 31 H 0.11 0.45 7.82 -2.39 -0.02 0.43 16 32 H 0.40 -3.18 8.70 -74.06 -0.64 -3.83 16 33 H -0.29 -2.43 7.11 99.48 0.71 -1.72 16 34 H -0.30 -2.84 7.11 99.48 0.71 -2.14 16 35 H 0.14 0.34 4.70 -2.91 -0.01 0.32 16 36 H 0.41 -3.97 6.73 -92.71 -0.62 -4.60 16 37 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 38 H 0.10 -0.35 6.32 -2.39 -0.02 -0.37 16 39 H 0.14 -0.76 6.66 -2.91 -0.02 -0.78 16 40 H 0.14 -0.57 8.06 -2.91 -0.02 -0.60 16 41 H 0.13 -0.36 8.06 -2.91 -0.02 -0.38 16 42 H 0.13 -0.32 8.06 -2.91 -0.02 -0.34 16 43 H 0.13 -0.32 8.06 -2.91 -0.02 -0.35 16 44 H 0.10 -0.84 7.70 -2.39 -0.02 -0.86 16 45 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 46 H 0.16 -1.83 6.39 -2.91 -0.02 -1.85 16 Total: 0.00 -20.89 379.57 -0.89 -21.78 By element: Atomic # 1 Polarization: -22.52 SS G_CDS: -0.86 Total: -23.38 kcal Atomic # 6 Polarization: 3.87 SS G_CDS: 3.32 Total: 7.19 kcal Atomic # 7 Polarization: 2.30 SS G_CDS: -2.35 Total: -0.05 kcal Atomic # 8 Polarization: -6.45 SS G_CDS: -3.05 Total: -9.50 kcal Atomic # 14 Polarization: 1.91 SS G_CDS: 2.05 Total: 3.96 kcal Total: -20.89 -0.89 -21.78 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.707 kcal (2) G-P(sol) polarization free energy of solvation -20.890 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.597 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.891 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.781 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.488 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds