Wall clock time and date at job start Sun Mar 7 2021 08:57:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.36423 * 125.80322 * 2 1 4 4 C 1.47377 * 127.18543 * 359.97438 * 3 2 1 5 5 O 1.21605 * 120.00589 * 359.97438 * 4 3 2 6 6 N 1.34784 * 119.99549 * 179.70900 * 4 3 2 7 7 C 1.46499 * 119.99971 * 179.97438 * 6 4 3 8 8 H 1.09006 * 112.84822 * 23.79911 * 7 6 4 9 9 C 1.53775 * 113.61462 * 154.99913 * 7 6 4 10 10 C 1.53780 * 87.08390 * 139.98289 * 9 7 6 11 11 H 1.09003 * 113.61528 * 89.11243 * 10 9 7 12 12 C 1.50697 * 113.61812 * 219.93944 * 10 9 7 13 13 C 1.38227 * 120.00317 * 59.71853 * 12 10 9 14 14 C 1.38235 * 120.00479 * 179.81566 * 13 12 10 15 15 C 1.38236 * 119.99364 * 0.39586 * 14 13 12 16 16 C 1.38235 * 120.00343 * 359.85714 * 15 14 13 17 17 C 1.38238 * 120.00035 * 359.95921 * 16 15 14 18 18 C 1.53784 * 113.61488 * 252.49901 * 7 6 4 19 19 C 1.47022 * 105.61803 * 179.73460 * 3 2 1 20 20 C 1.34175 * 105.95151 * 0.26166 * 19 3 2 21 21 C 1.50705 * 125.43496 * 179.97438 * 20 19 3 22 22 O 1.42905 * 109.47013 * 300.00168 * 21 20 19 23 23 Si 1.86297 * 109.47110 * 180.02562 * 21 20 19 24 24 O 1.33654 * 125.80362 * 180.18680 * 2 1 3 25 25 H 1.09006 * 109.46973 * 90.00072 * 1 2 3 26 26 H 1.08996 * 109.47287 * 209.99618 * 1 2 3 27 27 H 1.08996 * 109.47364 * 330.00202 * 1 2 3 28 28 H 0.96999 * 120.00044 * 359.97438 * 6 4 3 29 29 H 1.09005 * 113.61447 * 254.53082 * 9 7 6 30 30 H 1.08991 * 113.61578 * 25.43347 * 9 7 6 31 31 H 1.08004 * 119.99917 * 0.02562 * 13 12 10 32 32 H 1.08000 * 120.00576 * 180.23690 * 14 13 12 33 33 H 1.08003 * 119.99888 * 179.84023 * 15 14 13 34 34 H 1.07996 * 120.00126 * 179.97438 * 16 15 14 35 35 H 1.07989 * 120.00277 * 179.97438 * 17 16 15 36 36 H 1.08996 * 113.60949 * 334.56614 * 18 7 6 37 37 H 1.09001 * 113.61595 * 105.46866 * 18 7 6 38 38 H 1.07998 * 127.01964 * 180.27981 * 19 3 2 39 39 H 1.08997 * 109.46716 * 59.99936 * 21 20 19 40 40 H 0.96701 * 113.99668 * 299.99629 * 22 21 20 41 41 H 1.48503 * 110.00064 * 58.68004 * 23 21 20 42 42 H 1.48498 * 110.00091 * 179.97438 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8739 2.5157 -0.0005 5 8 0.6890 2.7892 -0.0015 6 7 2.7930 3.5016 0.0055 7 6 2.3645 4.9025 0.0044 8 1 1.3595 5.0380 0.4043 9 6 3.4021 5.8645 0.6065 10 6 3.0309 6.8443 -0.5191 11 1 2.2079 7.5117 -0.2633 12 6 4.2153 7.5720 -1.1010 13 6 5.2462 6.8593 -1.6841 14 6 6.3308 7.5270 -2.2214 15 6 6.3884 8.9071 -2.1681 16 6 5.3599 9.6196 -1.5803 17 6 4.2735 8.9521 -1.0465 18 6 2.5969 5.6168 -1.3375 19 6 3.6849 0.5991 0.0066 20 6 3.5859 -0.7390 0.0039 21 6 4.7460 -1.7010 0.0080 22 8 5.5484 -1.4846 -1.1545 23 14 4.1028 -3.4494 0.0013 24 8 2.2888 -1.0840 -0.0035 25 1 -0.3633 0.0000 -1.0277 26 1 -0.3633 -0.8900 0.5137 27 1 -0.3634 0.8900 0.5138 28 1 3.7381 3.2835 0.0105 29 1 3.1392 6.2230 1.6018 30 1 4.4261 5.4964 0.5449 31 1 5.2026 5.7808 -1.7230 32 1 7.1345 6.9703 -2.6804 33 1 7.2370 9.4287 -2.5855 34 1 5.4051 10.6978 -1.5384 35 1 3.4702 9.5087 -0.5869 36 1 3.4009 5.1809 -1.9305 37 1 1.6841 5.7753 -1.9117 38 1 4.5928 1.1841 0.0126 39 1 5.3492 -1.5388 0.9012 40 1 5.0752 -1.6117 -1.9882 41 1 3.2528 -3.6733 -1.1957 42 1 5.2370 -4.4078 0.0047 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:04 Heat of formation + Delta-G solvation = -2.035273 kcal Electronic energy + Delta-G solvation = -25121.406786 eV Core-core repulsion = 21421.303105 eV Total energy + Delta-G solvation = -3700.103681 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 314.135 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -43.73770 -41.41626 -40.09578 -38.64290 -38.21366 -34.80275 -33.96636 -33.09799 -31.87764 -31.60971 -29.44488 -26.77906 -26.63942 -25.49719 -24.15579 -23.59009 -22.66794 -21.69163 -21.06506 -20.07605 -18.96747 -18.20884 -17.93215 -17.69902 -16.98087 -16.77307 -16.41522 -16.06603 -16.03723 -15.73151 -15.60780 -15.23228 -14.79338 -14.35816 -14.27896 -14.20580 -14.13883 -13.98043 -13.90046 -13.78143 -13.54892 -13.12255 -12.98423 -12.85150 -12.56597 -12.34776 -12.11036 -11.84227 -11.71180 -11.47410 -11.03769 -10.86139 -10.72178 -10.03986 -9.82594 -9.58276 -9.53594 -5.02419 0.30691 0.42268 0.49363 0.82495 1.09978 1.41631 1.67213 1.88396 2.20891 2.35920 2.82448 3.06149 3.33188 3.41019 3.62841 3.68637 3.75997 3.77111 3.88694 4.00082 4.09124 4.11494 4.14859 4.23262 4.25769 4.40991 4.51529 4.54920 4.57716 4.61953 4.63941 4.69859 4.74932 4.81364 4.91843 4.96621 5.06654 5.10888 5.13846 5.20096 5.23496 5.54469 5.56980 5.63210 5.71748 5.89958 6.09233 6.17460 6.52242 7.25614 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.096 3.904 3 C -0.254 4.254 4 C 0.594 3.406 5 O -0.539 6.539 6 N -0.714 5.714 7 C 0.124 3.876 8 H 0.119 0.881 9 C -0.136 4.136 10 C -0.071 4.071 11 H 0.103 0.897 12 C -0.070 4.070 13 C -0.118 4.118 14 C -0.118 4.118 15 C -0.124 4.124 16 C -0.118 4.118 17 C -0.116 4.116 18 C -0.145 4.145 19 C -0.148 4.148 20 C -0.055 4.055 21 C -0.034 4.034 22 O -0.521 6.521 23 Si 0.702 3.298 24 O -0.168 6.168 25 H 0.091 0.909 26 H 0.083 0.917 27 H 0.111 0.889 28 H 0.401 0.599 29 H 0.079 0.921 30 H 0.089 0.911 31 H 0.120 0.880 32 H 0.121 0.879 33 H 0.121 0.879 34 H 0.122 0.878 35 H 0.122 0.878 36 H 0.089 0.911 37 H 0.076 0.924 38 H 0.158 0.842 39 H 0.137 0.863 40 H 0.381 0.619 41 H -0.256 1.256 42 H -0.249 1.249 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.131 -0.403 1.530 1.944 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.042 3.958 3 C -0.259 4.259 4 C 0.383 3.617 5 O -0.418 6.418 6 N -0.364 5.364 7 C 0.019 3.981 8 H 0.137 0.863 9 C -0.174 4.174 10 C -0.089 4.089 11 H 0.121 0.879 12 C -0.070 4.070 13 C -0.136 4.136 14 C -0.136 4.136 15 C -0.142 4.142 16 C -0.136 4.136 17 C -0.134 4.134 18 C -0.183 4.183 19 C -0.168 4.168 20 C -0.103 4.103 21 C -0.144 4.144 22 O -0.328 6.328 23 Si 0.601 3.399 24 O -0.065 6.065 25 H 0.109 0.891 26 H 0.101 0.899 27 H 0.130 0.870 28 H 0.236 0.764 29 H 0.098 0.902 30 H 0.107 0.893 31 H 0.138 0.862 32 H 0.139 0.861 33 H 0.139 0.861 34 H 0.140 0.860 35 H 0.140 0.860 36 H 0.107 0.893 37 H 0.095 0.905 38 H 0.175 0.825 39 H 0.155 0.845 40 H 0.229 0.771 41 H -0.180 1.180 42 H -0.173 1.173 Dipole moment (debyes) X Y Z Total from point charges 0.625 -1.156 1.548 2.031 hybrid contribution 0.929 0.740 -1.153 1.655 sum 1.554 -0.416 0.396 1.657 Atomic orbital electron populations 1.20703 0.83317 1.05518 1.04734 1.22931 0.94079 0.82846 0.95905 1.21142 0.93219 0.93858 1.17632 1.17203 0.85477 0.83742 0.75318 1.90770 1.16541 1.84009 1.50491 1.45761 1.09590 1.05647 1.75387 1.22552 0.99964 0.78635 0.96923 0.86300 1.23454 0.99570 0.95498 0.98846 1.21329 0.96076 0.95031 0.96508 0.87884 1.19638 0.95390 0.93543 0.98403 1.20986 0.93919 0.99766 0.98899 1.21170 0.98198 0.94642 0.99584 1.21202 0.98906 0.94382 0.99742 1.21195 0.94118 1.00055 0.98184 1.21089 0.98523 0.93783 0.99981 1.23620 1.02464 0.95175 0.97085 1.22568 0.96445 0.93503 1.04258 1.22551 0.82941 0.95555 1.09249 1.24343 0.90190 1.07667 0.92174 1.86662 1.38644 1.91720 1.15728 0.94364 0.81890 0.73690 0.89950 1.83677 1.16351 1.35057 1.71408 0.89051 0.89867 0.87048 0.76433 0.90187 0.89298 0.86221 0.86053 0.86073 0.85979 0.86006 0.89295 0.90495 0.82487 0.84509 0.77081 1.18024 1.17276 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.02 9.89 36.00 0.36 0.37 16 2 C 0.10 0.15 7.37 -34.96 -0.26 -0.11 16 3 C -0.25 -0.47 6.31 -103.27 -0.65 -1.12 16 4 C 0.59 1.59 7.81 -12.54 -0.10 1.49 16 5 O -0.54 -2.91 14.44 5.27 0.08 -2.84 16 6 N -0.71 -0.02 5.35 -54.11 -0.29 -0.31 16 7 C 0.12 -0.03 4.24 -67.12 -0.28 -0.32 16 8 H 0.12 0.13 7.46 -51.93 -0.39 -0.26 16 9 C -0.14 0.21 7.30 -25.92 -0.19 0.02 16 10 C -0.07 0.06 3.98 -90.96 -0.36 -0.30 16 11 H 0.10 -0.15 8.09 -51.93 -0.42 -0.57 16 12 C -0.07 -0.03 5.29 -104.63 -0.55 -0.58 16 13 C -0.12 -0.04 8.60 -39.59 -0.34 -0.38 16 14 C -0.12 -0.07 10.05 -39.58 -0.40 -0.46 16 15 C -0.12 -0.09 10.05 -39.58 -0.40 -0.48 16 16 C -0.12 -0.08 10.05 -39.58 -0.40 -0.48 16 17 C -0.12 -0.07 9.71 -39.58 -0.38 -0.46 16 18 C -0.14 0.07 7.26 -25.91 -0.19 -0.12 16 19 C -0.15 -0.04 10.46 -37.45 -0.39 -0.43 16 20 C -0.05 -0.01 6.20 -35.74 -0.22 -0.23 16 21 C -0.03 0.04 2.98 36.01 0.11 0.15 16 22 O -0.52 0.11 12.86 -35.23 -0.45 -0.35 16 23 Si 0.70 -0.92 32.08 -169.99 -5.45 -6.37 16 24 O -0.17 -0.18 8.89 7.64 0.07 -0.12 16 25 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 26 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 27 H 0.11 0.11 6.49 -51.93 -0.34 -0.22 16 28 H 0.40 -0.81 7.90 -40.82 -0.32 -1.13 16 29 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 30 H 0.09 -0.17 7.69 -51.93 -0.40 -0.57 16 31 H 0.12 -0.13 6.68 -52.48 -0.35 -0.48 16 32 H 0.12 -0.12 8.06 -52.49 -0.42 -0.55 16 33 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 34 H 0.12 -0.11 8.06 -52.49 -0.42 -0.54 16 35 H 0.12 -0.10 8.05 -52.49 -0.42 -0.53 16 36 H 0.09 -0.05 6.33 -51.93 -0.33 -0.38 16 37 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 38 H 0.16 -0.27 7.74 -52.49 -0.41 -0.67 16 39 H 0.14 -0.37 7.96 -51.93 -0.41 -0.79 16 40 H 0.38 -1.05 8.70 45.56 0.40 -0.65 16 41 H -0.26 -0.37 7.11 56.52 0.40 0.03 16 42 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 LS Contribution 355.21 15.07 5.35 5.35 Total: 0.00 -6.95 355.21 -10.90 -17.85 By element: Atomic # 1 Polarization: -4.23 SS G_CDS: -5.55 Total: -9.78 kcal Atomic # 6 Polarization: 1.21 SS G_CDS: -4.65 Total: -3.44 kcal Atomic # 7 Polarization: -0.02 SS G_CDS: -0.29 Total: -0.31 kcal Atomic # 8 Polarization: -2.99 SS G_CDS: -0.31 Total: -3.30 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.45 Total: -6.37 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -6.95 -10.90 -17.85 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.815 kcal (2) G-P(sol) polarization free energy of solvation -6.948 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.866 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.901 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.850 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.035 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds