Wall clock time and date at job start Sun Mar 7 2021 08:57:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86293 * 109.47366 * 2 1 4 4 C 1.50708 * 109.46710 * 119.99967 * 2 1 3 5 5 C 1.38052 * 119.80620 * 65.02075 * 4 2 1 6 6 C 1.38711 * 120.08433 * 179.72407 * 5 4 2 7 7 O 1.35647 * 120.15349 * 180.28040 * 6 5 4 8 8 C 1.40140 * 119.69866 * 0.48110 * 6 5 4 9 9 C 1.47530 * 120.19350 * 179.79491 * 8 6 5 10 10 O 1.21598 * 119.99732 * 359.72151 * 9 8 6 11 11 N 1.34773 * 120.00409 * 179.72485 * 9 8 6 12 12 C 1.46501 * 120.00122 * 179.97438 * 11 9 8 13 13 H 1.08993 * 112.90929 * 336.25213 * 12 11 9 14 14 C 1.53962 * 113.66387 * 107.55425 * 12 11 9 15 15 C 1.53782 * 87.11063 * 139.88885 * 14 12 11 16 16 H 1.08997 * 113.61225 * 89.18406 * 15 14 12 17 17 C 1.50703 * 113.61283 * 220.08867 * 15 14 12 18 18 C 1.38231 * 119.99840 * 37.22646 * 17 15 14 19 19 C 1.38241 * 119.99604 * 179.78966 * 18 17 15 20 20 C 1.38230 * 120.00230 * 0.43927 * 19 18 17 21 21 C 1.38244 * 119.99595 * 359.81297 * 20 19 18 22 22 C 1.38226 * 119.99958 * 359.97438 * 21 20 19 23 23 C 1.53781 * 87.08260 * 334.63747 * 15 14 12 24 24 C 1.39715 * 119.61571 * 359.52190 * 8 6 5 25 25 C 1.37782 * 119.90589 * 0.24726 * 24 8 6 26 26 H 0.96703 * 114.00440 * 300.00629 * 1 2 3 27 27 H 1.08995 * 109.47384 * 239.99461 * 2 1 3 28 28 H 1.48495 * 110.00260 * 299.99767 * 3 2 1 29 29 H 1.48506 * 110.00183 * 61.31517 * 3 2 1 30 30 H 1.07993 * 119.95786 * 359.95350 * 5 4 2 31 31 H 0.96698 * 114.00095 * 270.20526 * 7 6 5 32 32 H 0.97002 * 120.00080 * 0.02562 * 11 9 8 33 33 H 1.08997 * 113.53543 * 25.33559 * 14 12 11 34 34 H 1.08998 * 113.73879 * 254.47157 * 14 12 11 35 35 H 1.08003 * 120.00202 * 359.97438 * 18 17 15 36 36 H 1.07997 * 119.99700 * 180.27521 * 19 18 17 37 37 H 1.07994 * 120.00270 * 179.83471 * 20 19 18 38 38 H 1.07999 * 119.99487 * 180.02562 * 21 20 19 39 39 H 1.08005 * 119.99884 * 179.97438 * 22 21 20 40 40 H 1.09002 * 113.61445 * 139.98212 * 23 15 14 41 41 H 1.09002 * 113.61408 * 270.79943 * 23 15 14 42 42 H 1.07996 * 120.04298 * 180.26978 * 24 8 6 43 43 H 1.08003 * 119.84899 * 179.97438 * 25 24 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7105 1.2306 5 6 1.6830 -2.0586 1.3940 6 6 2.1475 -2.7195 2.5216 7 8 1.9093 -4.0454 2.6808 8 6 2.8604 -2.0103 3.4976 9 6 3.3556 -2.7013 4.7033 10 8 3.1411 -3.8886 4.8548 11 7 4.0456 -2.0168 5.6370 12 6 4.5368 -2.7029 6.8345 13 1 3.9683 -3.6022 7.0715 14 6 6.0614 -2.9170 6.8425 15 6 6.0251 -2.5627 8.3385 16 1 5.8643 -3.4236 8.9873 17 6 7.1786 -1.7006 8.7828 18 6 7.6649 -0.7125 7.9473 19 6 8.7202 0.0811 8.3566 20 6 9.2949 -0.1192 9.5977 21 6 8.8119 -1.1108 10.4311 22 6 7.7539 -1.9015 10.0235 23 6 4.7425 -1.7690 8.0389 24 6 3.1045 -0.6462 3.3195 25 6 2.6398 -0.0068 2.1910 26 1 -0.3934 0.4418 0.7650 27 1 1.7923 -0.5139 -0.8899 28 1 1.5616 2.4678 -1.2085 29 1 1.5879 2.4586 1.2242 30 1 1.1296 -2.6002 0.6411 31 1 1.0840 -4.2438 3.1441 32 1 4.2164 -1.0695 5.5164 33 1 6.6057 -2.1936 6.2354 34 1 6.3610 -3.9462 6.6446 35 1 7.2185 -0.5587 6.9759 36 1 9.0972 0.8560 7.7057 37 1 10.1210 0.4990 9.9164 38 1 9.2607 -1.2671 11.4009 39 1 7.3767 -2.6765 10.6744 40 1 3.9760 -1.8717 8.8070 41 1 4.9262 -0.7313 7.7604 42 1 3.6570 -0.0939 4.0652 43 1 2.8287 1.0478 2.0544 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:10 Heat of formation + Delta-G solvation = -25.242150 kcal Electronic energy + Delta-G solvation = -26380.221832 eV Core-core repulsion = 22550.885685 eV Total energy + Delta-G solvation = -3829.336147 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.135 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.79653 -41.08888 -39.85122 -38.77782 -38.25557 -37.24046 -34.77053 -32.85870 -31.86672 -31.51073 -31.13887 -27.76237 -26.79220 -25.92955 -23.98670 -23.75454 -23.49238 -22.35728 -21.51436 -20.54404 -19.37625 -18.64305 -18.36168 -18.18342 -17.24440 -16.84900 -16.56383 -16.36117 -16.25652 -16.06226 -15.84201 -15.67259 -15.35324 -15.16509 -14.98331 -14.50583 -14.32444 -14.20361 -13.92068 -13.77757 -13.56701 -13.33981 -13.10815 -12.98383 -12.59215 -12.44080 -12.35674 -12.10752 -11.85430 -11.72496 -11.63059 -11.49131 -10.85913 -10.64003 -10.19668 -10.03122 -9.84189 -9.81780 -9.57632 -5.07226 -0.43420 0.07624 0.40666 0.47938 1.13451 1.46986 1.74229 1.85840 2.07461 2.55459 2.80999 3.05504 3.27144 3.35655 3.42176 3.56956 3.61967 3.66444 3.70924 3.85625 3.95198 3.99054 4.07805 4.11845 4.17948 4.21909 4.32616 4.49708 4.54465 4.56412 4.60471 4.65909 4.67091 4.73362 4.89172 4.93512 4.96033 5.04788 5.08931 5.11623 5.16750 5.18788 5.48661 5.51591 5.55450 5.61835 5.70194 6.07768 6.25887 6.44633 6.69137 7.21375 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.081 4.081 3 Si 0.691 3.309 4 C -0.074 4.074 5 C -0.129 4.129 6 C 0.173 3.827 7 O -0.476 6.476 8 C -0.164 4.164 9 C 0.559 3.441 10 O -0.517 6.517 11 N -0.718 5.718 12 C 0.124 3.876 13 H 0.119 0.881 14 C -0.145 4.145 15 C -0.071 4.071 16 H 0.103 0.897 17 C -0.070 4.070 18 C -0.118 4.118 19 C -0.118 4.118 20 C -0.124 4.124 21 C -0.117 4.117 22 C -0.116 4.116 23 C -0.135 4.135 24 C -0.065 4.065 25 C -0.137 4.137 26 H 0.377 0.623 27 H 0.123 0.877 28 H -0.255 1.255 29 H -0.258 1.258 30 H 0.140 0.860 31 H 0.398 0.602 32 H 0.399 0.601 33 H 0.089 0.911 34 H 0.077 0.923 35 H 0.120 0.880 36 H 0.122 0.878 37 H 0.121 0.879 38 H 0.122 0.878 39 H 0.122 0.878 40 H 0.079 0.921 41 H 0.089 0.911 42 H 0.133 0.867 43 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.698 4.760 1.689 5.329 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.191 4.191 3 Si 0.592 3.408 4 C -0.075 4.075 5 C -0.147 4.147 6 C 0.126 3.874 7 O -0.287 6.287 8 C -0.168 4.168 9 C 0.347 3.653 10 O -0.393 6.393 11 N -0.370 5.370 12 C 0.019 3.981 13 H 0.136 0.864 14 C -0.183 4.183 15 C -0.090 4.090 16 H 0.121 0.879 17 C -0.070 4.070 18 C -0.136 4.136 19 C -0.136 4.136 20 C -0.142 4.142 21 C -0.135 4.135 22 C -0.134 4.134 23 C -0.174 4.174 24 C -0.084 4.084 25 C -0.155 4.155 26 H 0.225 0.775 27 H 0.141 0.859 28 H -0.180 1.180 29 H -0.183 1.183 30 H 0.158 0.842 31 H 0.256 0.744 32 H 0.235 0.765 33 H 0.108 0.892 34 H 0.096 0.904 35 H 0.138 0.862 36 H 0.140 0.860 37 H 0.139 0.861 38 H 0.140 0.860 39 H 0.140 0.860 40 H 0.098 0.902 41 H 0.107 0.893 42 H 0.151 0.849 43 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 1.927 4.330 0.958 4.835 hybrid contribution -1.266 0.338 0.779 1.525 sum 0.661 4.667 1.737 5.024 Atomic orbital electron populations 1.86637 1.17310 1.79970 1.49335 1.25159 0.84259 1.11399 0.98256 0.94861 0.91545 0.74002 0.80430 1.20377 0.96806 0.94121 0.96196 1.21356 1.00921 0.93888 0.98547 1.18516 0.93746 0.83477 0.91638 1.84760 1.46191 1.17859 1.79905 1.20447 1.05568 0.94372 0.96398 1.18084 0.78018 0.86706 0.82526 1.90837 1.56590 1.14519 1.77375 1.45897 1.56791 1.13035 1.21279 1.22572 0.94561 0.97156 0.83800 0.86362 1.23652 0.96292 1.03138 0.95265 1.21324 0.92798 0.97918 0.96910 0.87895 1.19635 0.96575 0.96396 0.94374 1.20986 0.97237 0.95864 0.99498 1.21169 0.96471 0.99436 0.96509 1.21204 1.00141 0.98332 0.94551 1.21196 0.96764 0.95775 0.99808 1.21088 0.96549 0.99788 0.95953 1.23454 0.97294 0.99118 0.97493 1.21136 0.97390 0.92573 0.97293 1.20994 0.99908 1.00233 0.94360 0.77538 0.85928 1.17995 1.18290 0.84192 0.74358 0.76547 0.89232 0.90448 0.86175 0.86024 0.86070 0.85989 0.86026 0.90233 0.89294 0.84898 0.84663 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.05 12.83 -35.23 -0.45 -0.50 16 2 C -0.08 0.11 2.79 36.01 0.10 0.21 16 3 Si 0.69 -1.60 29.86 -169.99 -5.08 -6.67 16 4 C -0.07 0.07 5.35 -104.57 -0.56 -0.49 16 5 C -0.13 -0.05 9.60 -39.48 -0.38 -0.43 16 6 C 0.17 0.30 6.72 -38.69 -0.26 0.04 16 7 O -0.48 -1.30 11.58 -40.52 -0.47 -1.77 16 8 C -0.16 -0.14 5.89 -104.84 -0.62 -0.76 16 9 C 0.56 1.25 7.76 -12.47 -0.10 1.15 16 10 O -0.52 -3.07 14.76 -16.60 -0.25 -3.32 16 11 N -0.72 0.62 5.31 -53.96 -0.29 0.33 16 12 C 0.12 -0.09 4.25 -67.02 -0.28 -0.37 16 13 H 0.12 0.11 7.46 -51.93 -0.39 -0.28 16 14 C -0.14 0.12 7.26 -25.82 -0.19 -0.06 16 15 C -0.07 0.09 3.98 -90.96 -0.36 -0.27 16 16 H 0.10 -0.17 8.10 -51.93 -0.42 -0.59 16 17 C -0.07 0.00 5.29 -104.63 -0.55 -0.55 16 18 C -0.12 0.03 8.63 -39.58 -0.34 -0.31 16 19 C -0.12 0.00 10.05 -39.58 -0.40 -0.39 16 20 C -0.12 -0.03 10.05 -39.58 -0.40 -0.43 16 21 C -0.12 -0.04 10.05 -39.58 -0.40 -0.44 16 22 C -0.12 -0.03 9.71 -39.59 -0.38 -0.42 16 23 C -0.14 0.28 7.29 -25.92 -0.19 0.10 16 24 C -0.07 0.12 9.54 -39.20 -0.37 -0.25 16 25 C -0.14 0.28 8.64 -39.63 -0.34 -0.06 16 26 H 0.38 -1.08 8.70 45.56 0.40 -0.69 16 27 H 0.12 -0.23 7.96 -51.93 -0.41 -0.65 16 28 H -0.26 -0.33 7.11 56.52 0.40 0.08 16 29 H -0.26 0.21 7.00 56.52 0.40 0.60 16 30 H 0.14 0.02 8.06 -52.49 -0.42 -0.40 16 31 H 0.40 -0.36 9.06 45.56 0.41 0.05 16 32 H 0.40 -1.43 6.76 -40.82 -0.28 -1.70 16 33 H 0.09 -0.11 6.30 -51.93 -0.33 -0.44 16 34 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 35 H 0.12 -0.24 6.64 -52.48 -0.35 -0.59 16 36 H 0.12 -0.21 8.06 -52.49 -0.42 -0.63 16 37 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 38 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 39 H 0.12 -0.13 8.06 -52.48 -0.42 -0.56 16 40 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 41 H 0.09 -0.25 7.71 -51.93 -0.40 -0.65 16 42 H 0.13 -0.65 6.40 -52.49 -0.34 -0.98 16 43 H 0.14 -0.54 4.81 -52.48 -0.25 -0.79 16 LS Contribution 357.75 15.07 5.39 5.39 Total: 0.00 -8.98 357.75 -11.68 -20.65 By element: Atomic # 1 Polarization: -5.86 SS G_CDS: -4.52 Total: -10.37 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -6.02 Total: -3.74 kcal Atomic # 7 Polarization: 0.62 SS G_CDS: -0.29 Total: 0.33 kcal Atomic # 8 Polarization: -4.42 SS G_CDS: -1.17 Total: -5.59 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.08 Total: -6.67 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -8.98 -11.68 -20.65 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.589 kcal (2) G-P(sol) polarization free energy of solvation -8.976 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.565 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.677 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.653 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.242 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds