Wall clock time and date at job start Sun Mar 7 2021 08:57:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37793 * 119.84934 * 2 1 4 4 C 1.39698 * 119.90837 * 180.02562 * 3 2 1 5 5 C 1.47534 * 120.19339 * 179.97438 * 4 3 2 6 6 O 1.21586 * 120.00460 * 179.97438 * 5 4 3 7 7 N 1.34780 * 119.99735 * 359.97438 * 5 4 3 8 8 C 1.46502 * 120.00116 * 180.02562 * 7 5 4 9 9 H 1.09005 * 112.84954 * 23.80307 * 8 7 5 10 10 C 1.53779 * 113.61816 * 154.99539 * 8 7 5 11 11 C 1.53775 * 87.08208 * 139.98135 * 10 8 7 12 12 H 1.09000 * 113.61500 * 89.20277 * 11 10 8 13 13 C 1.50695 * 113.61797 * 220.02425 * 11 10 8 14 14 C 1.38237 * 120.00218 * 59.72217 * 13 11 10 15 15 C 1.38231 * 119.99966 * 179.76547 * 14 13 11 16 16 C 1.38234 * 120.00302 * 0.49286 * 15 14 13 17 17 C 1.38237 * 119.99589 * 359.78415 * 16 15 14 18 18 C 1.38235 * 120.00225 * 359.95825 * 17 16 15 19 19 C 1.53780 * 113.61624 * 252.49758 * 8 7 5 20 20 C 1.40143 * 119.61988 * 359.71687 * 4 3 2 21 21 O 1.35647 * 120.15461 * 180.29469 * 20 4 3 22 22 C 1.38710 * 119.69488 * 0.51145 * 20 4 3 23 23 C 1.50699 * 119.95717 * 179.79125 * 22 20 4 24 24 O 1.42905 * 109.46972 * 284.71886 * 23 22 20 25 25 Si 1.86300 * 109.47350 * 164.72150 * 23 22 20 26 26 C 1.38058 * 120.08436 * 359.50959 * 22 20 4 27 27 H 1.09002 * 109.46689 * 270.02808 * 1 2 3 28 28 H 1.08996 * 109.47038 * 30.02146 * 1 2 3 29 29 H 1.08995 * 109.46899 * 150.02740 * 1 2 3 30 30 H 1.08005 * 120.04446 * 359.96980 * 3 2 1 31 31 H 0.96996 * 119.99847 * 359.97438 * 7 5 4 32 32 H 1.08994 * 113.61985 * 254.53248 * 10 8 7 33 33 H 1.09007 * 113.60965 * 25.35101 * 10 8 7 34 34 H 1.07997 * 119.99942 * 0.02562 * 14 13 11 35 35 H 1.07999 * 119.99928 * 180.25539 * 15 14 13 36 36 H 1.07999 * 120.00371 * 179.76754 * 16 15 14 37 37 H 1.08011 * 119.99666 * 179.97438 * 17 16 15 38 38 H 1.07999 * 119.99957 * 180.02562 * 18 17 16 39 39 H 1.09000 * 113.61016 * 334.57015 * 19 8 7 40 40 H 1.09000 * 113.61393 * 105.46558 * 19 8 7 41 41 H 0.96702 * 114.00328 * 270.21357 * 21 20 4 42 42 H 1.09000 * 109.47247 * 44.71950 * 23 22 20 43 43 H 0.96705 * 113.99788 * 180.02562 * 24 23 22 44 44 H 1.48501 * 109.99793 * 59.99689 * 25 23 22 45 45 H 1.48494 * 110.00207 * 181.31742 * 25 23 22 46 46 H 1.07997 * 119.80302 * 180.25654 * 26 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1929 1.1951 0.0000 4 6 3.5898 1.1966 -0.0005 5 6 4.3305 2.4725 -0.0011 6 8 5.5464 2.4698 -0.0011 7 7 3.6593 3.6413 -0.0016 8 6 4.3947 4.9084 -0.0028 9 1 5.4019 4.8128 -0.4085 10 6 3.5993 6.0818 -0.5988 11 6 4.1895 6.9500 0.5248 12 1 5.1404 7.4147 0.2640 13 6 3.2040 7.9254 1.1151 14 6 2.0424 7.4628 1.7047 15 6 1.1407 8.3573 2.2504 16 6 1.3957 9.7149 2.1974 17 6 2.5546 10.1777 1.6027 18 6 3.4589 9.2830 1.0617 19 6 4.3380 5.6548 1.3405 20 6 4.2837 -0.0210 0.0049 21 8 5.6402 -0.0322 0.0105 22 6 3.5771 -1.2146 0.0001 23 6 4.3173 -2.5273 0.0012 24 8 4.8550 -2.7720 -1.3001 25 14 3.1446 -3.9012 0.4569 26 6 2.1966 -1.2016 0.0001 27 1 -0.3633 0.0005 1.0277 28 1 -0.3633 0.8898 -0.5141 29 1 -0.3633 -0.8902 -0.5134 30 1 1.6511 2.1295 -0.0005 31 1 2.6893 3.6435 -0.0020 32 1 3.9311 6.3728 -1.5954 33 1 2.5187 5.9551 -0.5327 34 1 1.8413 6.4024 1.7427 35 1 0.2352 7.9957 2.7147 36 1 0.6895 10.4139 2.6204 37 1 2.7537 11.2385 1.5610 38 1 4.3645 9.6446 0.5975 39 1 3.4593 5.4119 1.9381 40 1 5.2661 5.6010 1.9095 41 1 6.0371 -0.0341 -0.8713 42 1 5.1288 -2.4863 0.7278 43 1 5.3454 -3.6023 -1.3732 44 1 2.0336 -3.9676 -0.5262 45 1 3.8693 -5.1968 0.4926 46 1 1.6511 -2.1336 0.0005 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:13 Heat of formation + Delta-G solvation = -29.387235 kcal Electronic energy + Delta-G solvation = -28645.934215 eV Core-core repulsion = 24660.880704 eV Total energy + Delta-G solvation = -3985.053511 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.151 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.79327 -41.10950 -39.82671 -38.58707 -37.98098 -37.62164 -34.74788 -33.22030 -32.82036 -31.84667 -31.46258 -27.66598 -26.79127 -26.76804 -26.43571 -24.66113 -23.59565 -22.40097 -21.82212 -21.37006 -20.36552 -19.39571 -18.59890 -18.24256 -18.14349 -17.47530 -16.87878 -16.60200 -16.38212 -16.04060 -15.88403 -15.70494 -15.40892 -15.27599 -15.00479 -14.81832 -14.61471 -14.32113 -14.17832 -14.09704 -13.97306 -13.76949 -13.54367 -13.25500 -13.13729 -13.07745 -12.58364 -12.56476 -12.45185 -12.33941 -11.84967 -11.80627 -11.71628 -11.60246 -11.46174 -10.71965 -10.45461 -10.15156 -9.96159 -9.82393 -9.56090 -9.48756 -5.03054 -0.29127 0.08214 0.42396 0.49559 1.20307 1.51504 1.78809 1.86847 2.13711 2.58415 2.82759 3.19451 3.26877 3.40830 3.56354 3.60652 3.67637 3.69608 3.75995 3.88375 4.00297 4.06520 4.09099 4.10671 4.12898 4.23066 4.29451 4.42459 4.52940 4.57231 4.58045 4.60491 4.63278 4.68538 4.75366 4.76273 4.92507 4.95711 4.98165 4.98940 5.07368 5.13348 5.18817 5.23851 5.34170 5.53628 5.57087 5.60659 5.63411 5.72216 6.09415 6.37923 6.50283 6.79610 7.27626 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.165 4.165 5 C 0.561 3.439 6 O -0.518 6.518 7 N -0.719 5.719 8 C 0.124 3.876 9 H 0.118 0.882 10 C -0.136 4.136 11 C -0.071 4.071 12 H 0.103 0.897 13 C -0.069 4.069 14 C -0.118 4.118 15 C -0.118 4.118 16 C -0.124 4.124 17 C -0.117 4.117 18 C -0.116 4.116 19 C -0.145 4.145 20 C 0.190 3.810 21 O -0.473 6.473 22 C -0.104 4.104 23 C -0.072 4.072 24 O -0.537 6.537 25 Si 0.689 3.311 26 C -0.076 4.076 27 H 0.077 0.923 28 H 0.070 0.930 29 H 0.070 0.930 30 H 0.131 0.869 31 H 0.399 0.601 32 H 0.079 0.921 33 H 0.089 0.911 34 H 0.120 0.880 35 H 0.122 0.878 36 H 0.121 0.879 37 H 0.122 0.878 38 H 0.122 0.878 39 H 0.089 0.911 40 H 0.077 0.923 41 H 0.398 0.602 42 H 0.082 0.918 43 H 0.382 0.618 44 H -0.253 1.253 45 H -0.259 1.259 46 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.010 0.143 0.856 5.085 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.098 4.098 3 C -0.086 4.086 4 C -0.168 4.168 5 C 0.349 3.651 6 O -0.393 6.393 7 N -0.371 5.371 8 C 0.019 3.981 9 H 0.136 0.864 10 C -0.174 4.174 11 C -0.090 4.090 12 H 0.121 0.879 13 C -0.069 4.069 14 C -0.136 4.136 15 C -0.136 4.136 16 C -0.142 4.142 17 C -0.135 4.135 18 C -0.134 4.134 19 C -0.183 4.183 20 C 0.143 3.857 21 O -0.284 6.284 22 C -0.105 4.105 23 C -0.182 4.182 24 O -0.345 6.345 25 Si 0.590 3.410 26 C -0.094 4.094 27 H 0.096 0.904 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.149 0.851 31 H 0.234 0.766 32 H 0.098 0.902 33 H 0.107 0.893 34 H 0.138 0.862 35 H 0.140 0.860 36 H 0.139 0.861 37 H 0.140 0.860 38 H 0.140 0.860 39 H 0.108 0.892 40 H 0.095 0.905 41 H 0.257 0.743 42 H 0.100 0.900 43 H 0.230 0.770 44 H -0.178 1.178 45 H -0.184 1.184 46 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -4.814 -0.047 1.077 4.933 hybrid contribution 0.481 -0.196 -1.214 1.320 sum -4.333 -0.243 -0.137 4.342 Atomic orbital electron populations 1.20830 0.89995 1.03413 1.03046 1.19768 0.96764 0.92189 1.01033 1.21110 0.92118 0.98246 0.97134 1.20355 0.93926 0.93428 1.09136 1.18056 0.87330 0.83382 0.76375 1.90827 1.13024 1.87271 1.48222 1.45897 1.10004 1.05322 1.75843 1.22541 0.97631 0.80911 0.96970 0.86381 1.23456 1.00556 0.94493 0.98878 1.21328 0.98021 0.93123 0.96485 0.87897 1.19642 0.95177 0.93769 0.98357 1.20983 0.94125 0.99605 0.98865 1.21165 0.99394 0.93456 0.99572 1.21200 0.97535 0.95770 0.99732 1.21196 0.94430 0.99783 0.98137 1.21090 0.99657 0.92669 0.99967 1.23619 1.03436 0.94184 0.97079 1.18200 0.83945 0.89712 0.93837 1.84668 1.14183 1.95887 1.33703 1.19546 0.93347 0.93527 1.04088 1.24711 1.03884 1.01389 0.88199 1.86544 1.73610 1.44606 1.29703 0.94913 0.80085 0.76591 0.89427 1.21111 0.92766 0.98548 0.96939 0.90418 0.91090 0.91097 0.85141 0.76584 0.90233 0.89301 0.86197 0.86042 0.86080 0.85996 0.86027 0.89240 0.90466 0.74274 0.89964 0.77025 1.17823 1.18354 0.84670 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.35 10.00 36.01 0.36 0.71 16 2 C -0.10 0.07 5.87 -104.67 -0.61 -0.55 16 3 C -0.07 0.04 9.18 -39.20 -0.36 -0.32 16 4 C -0.16 -0.35 5.89 -104.85 -0.62 -0.96 16 5 C 0.56 1.76 7.76 -12.47 -0.10 1.67 16 6 O -0.52 -3.48 14.76 -16.59 -0.24 -3.72 16 7 N -0.72 0.06 5.31 -54.06 -0.29 -0.23 16 8 C 0.12 -0.02 4.24 -67.12 -0.28 -0.30 16 9 H 0.12 0.17 7.46 -51.93 -0.39 -0.21 16 10 C -0.14 0.22 7.29 -25.92 -0.19 0.03 16 11 C -0.07 0.07 3.98 -90.96 -0.36 -0.30 16 12 H 0.10 -0.14 8.09 -51.93 -0.42 -0.56 16 13 C -0.07 -0.02 5.29 -104.63 -0.55 -0.57 16 14 C -0.12 0.00 8.60 -39.58 -0.34 -0.34 16 15 C -0.12 -0.03 10.05 -39.59 -0.40 -0.42 16 16 C -0.12 -0.06 10.05 -39.58 -0.40 -0.45 16 17 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 18 C -0.12 -0.06 9.71 -39.58 -0.38 -0.45 16 19 C -0.14 0.06 7.25 -25.92 -0.19 -0.13 16 20 C 0.19 0.59 6.69 -38.69 -0.26 0.33 16 21 O -0.47 -1.86 10.90 -40.52 -0.44 -2.30 16 22 C -0.10 -0.18 5.30 -104.51 -0.55 -0.73 16 23 C -0.07 -0.04 2.37 36.01 0.09 0.05 16 24 O -0.54 -0.58 12.86 -35.23 -0.45 -1.04 16 25 Si 0.69 -0.70 30.19 -169.99 -5.13 -5.83 16 26 C -0.08 -0.02 8.30 -39.53 -0.33 -0.35 16 27 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 28 H 0.07 -0.27 8.08 -51.93 -0.42 -0.69 16 29 H 0.07 -0.22 8.08 -51.93 -0.42 -0.64 16 30 H 0.13 -0.45 6.40 -52.48 -0.34 -0.79 16 31 H 0.40 -1.08 6.76 -40.82 -0.28 -1.35 16 32 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 33 H 0.09 -0.20 7.69 -51.92 -0.40 -0.60 16 34 H 0.12 -0.19 6.67 -52.49 -0.35 -0.54 16 35 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 36 H 0.12 -0.13 8.06 -52.49 -0.42 -0.56 16 37 H 0.12 -0.12 8.06 -52.48 -0.42 -0.55 16 38 H 0.12 -0.10 8.05 -52.49 -0.42 -0.53 16 39 H 0.09 -0.07 6.32 -51.93 -0.33 -0.40 16 40 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 41 H 0.40 0.61 9.06 45.56 0.41 1.02 16 42 H 0.08 0.01 7.82 -51.93 -0.41 -0.39 16 43 H 0.38 -1.03 8.74 45.56 0.40 -0.63 16 44 H -0.25 -0.31 6.74 56.52 0.38 0.07 16 45 H -0.26 -0.27 7.11 56.52 0.40 0.14 16 46 H 0.14 -0.16 4.87 -52.49 -0.26 -0.41 16 LS Contribution 378.46 15.07 5.70 5.70 Total: 0.00 -8.76 378.46 -12.10 -20.86 By element: Atomic # 1 Polarization: -4.51 SS G_CDS: -5.37 Total: -9.87 kcal Atomic # 6 Polarization: 2.31 SS G_CDS: -5.88 Total: -3.57 kcal Atomic # 7 Polarization: 0.06 SS G_CDS: -0.29 Total: -0.23 kcal Atomic # 8 Polarization: -5.92 SS G_CDS: -1.14 Total: -7.06 kcal Atomic # 14 Polarization: -0.70 SS G_CDS: -5.13 Total: -5.83 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -8.76 -12.10 -20.86 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.528 kcal (2) G-P(sol) polarization free energy of solvation -8.760 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.288 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.099 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.859 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.387 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds