Wall clock time and date at job start Sun Mar 7 2021 08:57:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39043 * 110.99815 * 236.04799 * 2 1 3 5 5 C 1.39206 * 119.92937 * 239.73104 * 4 2 1 6 6 C 1.50693 * 119.96798 * 359.97310 * 5 4 2 7 7 O 1.42906 * 109.46958 * 75.00154 * 6 5 4 8 8 Si 1.86295 * 109.47443 * 195.00119 * 6 5 4 9 9 C 1.37634 * 120.06756 * 179.72322 * 5 4 2 10 10 C 1.39785 * 119.92582 * 0.54888 * 9 5 4 11 11 C 1.47520 * 120.06381 * 179.70489 * 10 9 5 12 12 O 1.21594 * 120.00407 * 0.02562 * 11 10 9 13 13 N 1.34775 * 120.00129 * 180.02562 * 11 10 9 14 14 C 1.46502 * 120.00356 * 179.97438 * 13 11 10 15 15 H 1.08998 * 112.84716 * 334.66440 * 14 13 11 16 16 C 1.53774 * 113.61439 * 105.86177 * 14 13 11 17 17 C 1.53956 * 87.02001 * 139.94982 * 16 14 13 18 18 H 1.09004 * 113.53552 * 89.18956 * 17 16 14 19 19 C 1.50701 * 113.66915 * 220.06333 * 17 16 14 20 20 C 1.38234 * 119.99824 * 37.28898 * 19 17 16 21 21 C 1.38237 * 119.99879 * 179.74253 * 20 19 17 22 22 C 1.38227 * 119.99754 * 0.52690 * 21 20 19 23 23 C 1.38230 * 120.00405 * 359.74859 * 22 21 20 24 24 C 1.38232 * 119.99914 * 359.97438 * 23 22 21 25 25 C 1.53779 * 87.11071 * 334.63876 * 17 16 14 26 26 C 1.39802 * 119.86563 * 359.72133 * 10 9 5 27 27 C 1.37590 * 119.93445 * 0.02562 * 26 10 9 28 28 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 29 29 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 30 30 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 31 31 H 1.09007 * 109.46909 * 60.00094 * 3 2 1 32 32 H 1.08998 * 109.47110 * 179.97438 * 3 2 1 33 33 H 1.09002 * 109.47061 * 300.00284 * 3 2 1 34 34 H 1.09001 * 109.47417 * 315.00615 * 6 5 4 35 35 H 0.96698 * 113.99968 * 60.00207 * 7 6 5 36 36 H 1.48507 * 109.99776 * 58.68457 * 8 6 5 37 37 H 1.48502 * 110.00176 * 180.02562 * 8 6 5 38 38 H 1.07994 * 120.03505 * 180.28882 * 9 5 4 39 39 H 0.97002 * 119.99415 * 359.97438 * 13 11 10 40 40 H 1.09000 * 113.61776 * 254.52863 * 16 14 13 41 41 H 1.09001 * 113.61435 * 25.43227 * 16 14 13 42 42 H 1.08005 * 119.99706 * 359.97438 * 20 19 17 43 43 H 1.08006 * 119.99463 * 180.30033 * 21 20 19 44 44 H 1.08001 * 119.99926 * 179.76610 * 22 21 20 45 45 H 1.07999 * 120.00189 * 179.97438 * 23 22 21 46 46 H 1.08003 * 120.00218 * 179.97438 * 24 23 22 47 47 H 1.09003 * 113.61413 * 270.80979 * 25 17 16 48 48 H 1.08999 * 113.61721 * 139.91273 * 25 17 16 49 49 H 1.08004 * 120.03724 * 179.97438 * 26 10 9 50 50 H 1.08001 * 119.97077 * 179.97438 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7250 -1.0768 5 6 2.7839 -1.8297 -0.8520 6 6 3.1270 -2.2377 0.5575 7 8 1.9957 -2.8708 1.1589 8 14 4.5611 -3.4265 0.5282 9 6 3.2740 -2.5528 -1.9156 10 6 2.9603 -2.1699 -3.2228 11 6 3.4893 -2.9389 -4.3652 12 8 4.1985 -3.9071 -4.1703 13 7 3.1864 -2.5682 -5.6252 14 6 3.7122 -3.3315 -6.7597 15 1 4.6352 -3.8605 -6.5226 16 6 2.6580 -4.2117 -7.4515 17 6 3.3010 -3.7931 -8.7862 18 1 4.1112 -4.4495 -9.1039 19 6 2.3012 -3.5232 -9.8811 20 6 1.0979 -2.9117 -9.5828 21 6 0.1831 -2.6594 -10.5880 22 6 0.4670 -3.0283 -11.8895 23 6 1.6679 -3.6449 -12.1868 24 6 2.5851 -3.8921 -11.1827 25 6 3.7837 -2.5230 -8.0659 26 6 2.1445 -1.0566 -3.4454 27 6 1.6534 -0.3409 -2.3778 28 1 -0.3634 -1.0252 0.0708 29 1 -0.3633 0.4513 -0.9233 30 1 -0.3633 0.5740 0.8525 31 1 1.6461 1.8947 0.8901 32 1 3.0851 1.3422 0.0005 33 1 1.6460 1.8948 -0.8900 34 1 3.3990 -1.3545 1.1355 35 1 1.6978 -3.6659 0.6962 36 1 5.7344 -2.7910 -0.1235 37 1 4.9089 -3.8370 1.9124 38 1 3.9036 -3.4125 -1.7404 39 1 2.6203 -1.7961 -5.7807 40 1 2.7623 -5.2738 -7.2297 41 1 1.6373 -3.8504 -7.3263 42 1 0.8741 -2.6278 -8.5651 43 1 -0.7551 -2.1772 -10.3556 44 1 -0.2494 -2.8346 -12.6742 45 1 1.8895 -3.9335 -13.2037 46 1 3.5233 -4.3742 -11.4149 47 1 3.0713 -1.6991 -8.1090 48 1 4.7955 -2.2237 -8.3394 49 1 1.9007 -0.7580 -4.4543 50 1 1.0234 0.5195 -2.5491 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:16 Heat of formation + Delta-G solvation = 30.201776 kcal Electronic energy + Delta-G solvation = -30482.493866 eV Core-core repulsion = 26442.205372 eV Total energy + Delta-G solvation = -4040.288494 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.178 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -41.82419 -41.21700 -40.13856 -38.73994 -37.78090 -37.15536 -34.85331 -32.81304 -31.94152 -31.75882 -31.09579 -28.64652 -26.89391 -26.85404 -26.80448 -25.42893 -23.66847 -23.38884 -22.87362 -22.24032 -21.25065 -20.45683 -18.99591 -18.26810 -17.82921 -17.66681 -17.15697 -16.74602 -16.44373 -16.23461 -16.16065 -15.94049 -15.82855 -15.52545 -15.33256 -15.26982 -14.89389 -14.77178 -14.37443 -14.23714 -14.15687 -14.01773 -13.89844 -13.59854 -13.58329 -13.24762 -13.13781 -12.97138 -12.73812 -12.61645 -12.56531 -12.37631 -12.06076 -11.90341 -11.87485 -11.73829 -11.50946 -10.90687 -10.30851 -10.15118 -10.12709 -9.85255 -9.79934 -9.58928 -9.57289 -4.90972 -0.37813 0.11905 0.39577 0.46825 1.37919 1.69152 1.76183 2.05716 2.06751 2.64070 2.72896 2.79935 3.35158 3.47670 3.55339 3.63000 3.64752 3.65305 3.77857 3.84544 3.96229 3.97009 4.06027 4.07476 4.10791 4.19379 4.20821 4.24251 4.38879 4.46156 4.48822 4.51392 4.54952 4.59032 4.62105 4.63461 4.71941 4.76984 4.82641 4.88533 4.91061 4.94461 4.99428 5.03973 5.08545 5.10332 5.16896 5.23004 5.45707 5.53795 5.54418 5.60810 5.69012 5.75370 6.06671 6.23691 6.41328 6.71012 7.15403 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 N -0.508 5.508 3 C 0.025 3.975 4 C 0.143 3.857 5 C -0.107 4.107 6 C -0.044 4.044 7 O -0.529 6.529 8 Si 0.666 3.334 9 C -0.048 4.048 10 C -0.137 4.137 11 C 0.561 3.439 12 O -0.530 6.530 13 N -0.717 5.717 14 C 0.123 3.877 15 H 0.119 0.881 16 C -0.144 4.144 17 C -0.071 4.071 18 H 0.103 0.897 19 C -0.070 4.070 20 C -0.118 4.118 21 C -0.118 4.118 22 C -0.124 4.124 23 C -0.117 4.117 24 C -0.116 4.116 25 C -0.136 4.136 26 C -0.069 4.069 27 C -0.158 4.158 28 H 0.075 0.925 29 H 0.030 0.970 30 H 0.076 0.924 31 H 0.078 0.922 32 H 0.070 0.930 33 H 0.032 0.968 34 H 0.119 0.881 35 H 0.373 0.627 36 H -0.256 1.256 37 H -0.251 1.251 38 H 0.145 0.855 39 H 0.400 0.600 40 H 0.078 0.922 41 H 0.089 0.911 42 H 0.120 0.880 43 H 0.121 0.879 44 H 0.121 0.879 45 H 0.122 0.878 46 H 0.122 0.878 47 H 0.088 0.912 48 H 0.080 0.920 49 H 0.128 0.872 50 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.075 2.336 -3.607 5.284 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 N -0.229 5.229 3 C -0.121 4.121 4 C 0.049 3.951 5 C -0.109 4.109 6 C -0.155 4.155 7 O -0.333 6.333 8 Si 0.568 3.432 9 C -0.067 4.067 10 C -0.140 4.140 11 C 0.349 3.651 12 O -0.408 6.408 13 N -0.368 5.368 14 C 0.018 3.982 15 H 0.137 0.863 16 C -0.183 4.183 17 C -0.090 4.090 18 H 0.121 0.879 19 C -0.070 4.070 20 C -0.136 4.136 21 C -0.136 4.136 22 C -0.142 4.142 23 C -0.135 4.135 24 C -0.134 4.134 25 C -0.174 4.174 26 C -0.089 4.089 27 C -0.179 4.179 28 H 0.094 0.906 29 H 0.049 0.951 30 H 0.094 0.906 31 H 0.097 0.903 32 H 0.088 0.912 33 H 0.051 0.949 34 H 0.136 0.864 35 H 0.219 0.781 36 H -0.181 1.181 37 H -0.175 1.175 38 H 0.162 0.838 39 H 0.235 0.765 40 H 0.096 0.904 41 H 0.108 0.892 42 H 0.138 0.862 43 H 0.139 0.861 44 H 0.139 0.861 45 H 0.140 0.860 46 H 0.140 0.860 47 H 0.107 0.893 48 H 0.098 0.902 49 H 0.145 0.855 50 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -1.503 1.772 -2.323 3.286 hybrid contribution -0.881 1.534 -1.023 2.044 sum -2.384 3.306 -3.347 5.274 Atomic orbital electron populations 1.22444 0.84897 1.03241 1.00904 1.59399 1.09123 1.14001 1.40352 1.22506 1.00939 0.87190 1.01508 1.18828 0.94263 0.93294 0.88749 1.20313 0.98661 0.95641 0.96270 1.24825 0.97366 1.02465 0.90855 1.86567 1.48239 1.44503 1.53969 0.95040 0.77910 0.87224 0.83042 1.21055 0.96776 0.98160 0.90664 1.19867 1.02363 0.98109 0.93659 1.18189 0.80093 0.83948 0.82899 1.90811 1.37295 1.27373 1.85283 1.45902 1.52706 1.32797 1.05360 1.22575 0.98480 0.93561 0.83549 0.86293 1.23648 0.99355 1.01195 0.94101 1.21359 0.97267 0.98058 0.92267 0.87855 1.19634 0.94884 0.98406 0.94056 1.20982 0.93770 0.99639 0.99202 1.21166 0.99410 0.99923 0.93110 1.21200 0.97260 0.98985 0.96768 1.21196 0.94137 0.98826 0.99372 1.21092 0.99618 1.00214 0.92429 1.23449 1.02764 0.97026 0.94139 1.21145 0.95090 0.93542 0.99094 1.21654 1.02087 1.01177 0.92937 0.90608 0.95149 0.90565 0.90342 0.91152 0.94892 0.86417 0.78059 1.18090 1.17539 0.83771 0.76457 0.90353 0.89245 0.86218 0.86061 0.86076 0.85977 0.86000 0.89312 0.90157 0.85468 0.85308 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 9.34 60.07 0.56 0.54 16 2 N -0.51 -0.25 4.20 -186.85 -0.78 -1.03 16 3 C 0.02 -0.02 9.32 60.06 0.56 0.54 16 4 C 0.14 0.08 4.69 -83.86 -0.39 -0.31 16 5 C -0.11 -0.09 5.27 -104.49 -0.55 -0.64 16 6 C -0.04 -0.04 2.33 36.00 0.08 0.04 16 7 O -0.53 -0.57 12.88 -35.23 -0.45 -1.02 16 8 Si 0.67 0.48 29.92 -169.99 -5.09 -4.60 16 9 C -0.05 -0.04 8.19 -39.22 -0.32 -0.37 16 10 C -0.14 -0.08 5.88 -104.95 -0.62 -0.69 16 11 C 0.56 0.93 7.76 -12.48 -0.10 0.84 16 12 O -0.53 -2.71 15.95 5.28 0.08 -2.62 16 13 N -0.72 0.81 5.31 -54.06 -0.29 0.52 16 14 C 0.12 -0.13 4.21 -67.12 -0.28 -0.41 16 15 H 0.12 0.05 7.50 -51.93 -0.39 -0.34 16 16 C -0.14 0.18 7.27 -25.83 -0.19 0.00 16 17 C -0.07 0.11 3.98 -90.87 -0.36 -0.25 16 18 H 0.10 -0.20 8.10 -51.93 -0.42 -0.62 16 19 C -0.07 0.01 5.29 -104.62 -0.55 -0.54 16 20 C -0.12 0.04 8.63 -39.58 -0.34 -0.30 16 21 C -0.12 0.01 10.05 -39.59 -0.40 -0.39 16 22 C -0.12 -0.02 10.05 -39.59 -0.40 -0.42 16 23 C -0.12 -0.03 10.05 -39.59 -0.40 -0.43 16 24 C -0.12 -0.02 9.71 -39.59 -0.38 -0.40 16 25 C -0.14 0.30 7.30 -25.92 -0.19 0.12 16 26 C -0.07 0.10 9.53 -39.23 -0.37 -0.28 16 27 C -0.16 0.13 8.57 -39.44 -0.34 -0.21 16 28 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 29 H 0.03 -0.05 7.10 -51.93 -0.37 -0.41 16 30 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 31 H 0.08 -0.11 8.14 -51.92 -0.42 -0.53 16 32 H 0.07 -0.03 8.12 -51.93 -0.42 -0.46 16 33 H 0.03 -0.05 7.45 -51.93 -0.39 -0.44 16 34 H 0.12 0.23 7.78 -51.93 -0.40 -0.17 16 35 H 0.37 -0.98 8.70 45.56 0.40 -0.58 16 36 H -0.26 -0.89 7.11 56.52 0.40 -0.48 16 37 H -0.25 -0.89 7.11 56.52 0.40 -0.49 16 38 H 0.15 0.09 4.70 -52.49 -0.25 -0.16 16 39 H 0.40 -1.45 6.73 -40.82 -0.27 -1.72 16 40 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 41 H 0.09 -0.14 6.31 -51.93 -0.33 -0.47 16 42 H 0.12 -0.24 6.65 -52.48 -0.35 -0.59 16 43 H 0.12 -0.20 8.06 -52.48 -0.42 -0.63 16 44 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 45 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 46 H 0.12 -0.15 8.06 -52.48 -0.42 -0.58 16 47 H 0.09 -0.25 7.70 -51.93 -0.40 -0.65 16 48 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 49 H 0.13 -0.53 6.39 -52.48 -0.34 -0.87 16 50 H 0.13 -0.27 7.01 -52.49 -0.37 -0.64 16 LS Contribution 403.05 15.07 6.07 6.07 Total: 0.00 -7.52 403.05 -12.73 -20.25 By element: Atomic # 1 Polarization: -6.70 SS G_CDS: -7.30 Total: -14.00 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -4.98 Total: -3.57 kcal Atomic # 7 Polarization: 0.56 SS G_CDS: -1.07 Total: -0.51 kcal Atomic # 8 Polarization: -3.27 SS G_CDS: -0.37 Total: -3.64 kcal Atomic # 14 Polarization: 0.48 SS G_CDS: -5.09 Total: -4.60 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -7.52 -12.73 -20.25 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.452 kcal (2) G-P(sol) polarization free energy of solvation -7.519 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.933 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.732 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.250 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.202 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds