Wall clock time and date at job start Sun Mar 7 2021 08:57:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35993 * 117.00384 * 2 1 4 4 C 1.38561 * 120.06289 * 0.23716 * 3 2 1 5 5 C 1.38275 * 120.01366 * 180.26865 * 4 3 2 6 6 C 1.50701 * 119.91865 * 179.74628 * 5 4 3 7 7 O 1.42898 * 109.47440 * 65.02361 * 6 5 4 8 8 Si 1.86302 * 109.47115 * 185.02538 * 6 5 4 9 9 C 1.38204 * 120.15896 * 359.77472 * 5 4 3 10 10 C 1.38382 * 120.13305 * 359.96924 * 9 5 4 11 11 Cl 1.73596 * 120.01132 * 180.02562 * 10 9 5 12 12 C 1.38618 * 119.97579 * 0.02562 * 10 9 5 13 13 O 1.36028 * 120.07704 * 180.02562 * 12 10 9 14 14 C 1.42903 * 117.00240 * 89.99859 * 13 12 10 15 15 C 1.52997 * 109.46660 * 270.00364 * 14 13 12 16 16 C 1.50701 * 109.47061 * 150.00029 * 14 13 12 17 17 O 1.21273 * 119.99976 * 5.00309 * 16 14 13 18 18 N 1.34771 * 119.99588 * 184.99773 * 16 14 13 19 19 C 1.46501 * 119.99708 * 180.02562 * 18 16 14 20 20 H 1.08997 * 112.85368 * 23.80419 * 19 18 16 21 21 C 1.53782 * 113.61539 * 154.99938 * 19 18 16 22 22 C 1.53781 * 87.08109 * 139.98075 * 21 19 18 23 23 H 1.08997 * 113.61665 * 89.20269 * 22 21 19 24 24 C 1.50706 * 113.61422 * 220.02323 * 22 21 19 25 25 C 1.38233 * 120.00109 * 59.72450 * 24 22 21 26 26 C 1.38239 * 119.99759 * 179.74218 * 25 24 22 27 27 C 1.38234 * 119.99986 * 0.53603 * 26 25 24 28 28 C 1.38238 * 120.00067 * 359.73675 * 27 26 25 29 29 C 1.38235 * 120.00108 * 359.97438 * 28 27 26 30 30 C 1.53779 * 87.08357 * 334.56759 * 22 21 19 31 31 H 1.09001 * 109.47710 * 179.97438 * 1 2 3 32 32 H 1.09003 * 109.47266 * 299.99560 * 1 2 3 33 33 H 1.09003 * 109.47480 * 59.99663 * 1 2 3 34 34 H 1.07997 * 119.98909 * 0.02562 * 4 3 2 35 35 H 1.09003 * 109.47354 * 305.02429 * 6 5 4 36 36 H 0.96704 * 113.99956 * 59.99786 * 7 6 5 37 37 H 1.48502 * 110.00185 * 58.67998 * 8 6 5 38 38 H 1.48497 * 110.00103 * 180.02562 * 8 6 5 39 39 H 1.08001 * 119.93823 * 179.97438 * 9 5 4 40 40 H 1.08999 * 109.46567 * 29.99945 * 14 13 12 41 41 H 1.09006 * 109.47188 * 299.99524 * 15 14 13 42 42 H 1.09000 * 109.47810 * 60.00105 * 15 14 13 43 43 H 1.09001 * 109.46745 * 179.97438 * 15 14 13 44 44 H 0.96998 * 120.00655 * 0.02562 * 18 16 14 45 45 H 1.09001 * 113.61345 * 25.43277 * 21 19 18 46 46 H 1.08994 * 113.61860 * 254.53352 * 21 19 18 47 47 H 1.08004 * 119.99934 * 0.02562 * 25 24 22 48 48 H 1.08000 * 119.99962 * 180.29747 * 26 25 24 49 49 H 1.08002 * 120.00254 * 179.76989 * 27 26 25 50 50 H 1.08000 * 120.00559 * 180.02562 * 28 27 26 51 51 H 1.07999 * 120.00165 * 179.97438 * 29 28 27 52 52 H 1.08997 * 113.61483 * 139.97846 * 30 22 21 53 53 H 1.09001 * 113.61530 * 270.88698 * 30 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 1.2932 2.3746 0.0050 5 6 1.9220 3.6061 -0.0007 6 6 1.1006 4.8695 -0.0010 7 8 0.3685 4.9622 1.2227 8 14 2.2285 6.3435 -0.1630 9 6 3.3020 3.6810 -0.0065 10 6 4.0606 2.5236 -0.0062 11 17 5.7938 2.6213 -0.0129 12 6 3.4359 1.2861 -0.0004 13 8 4.1795 0.1471 0.0005 14 6 4.5385 -0.3924 1.2741 15 6 5.8744 0.2037 1.7222 16 6 4.6673 -1.8901 1.1670 17 8 4.5606 -2.4322 0.0874 18 7 4.9011 -2.6269 2.2710 19 6 5.0268 -4.0828 2.1668 20 1 5.3239 -4.4119 1.1711 21 6 5.8587 -4.7117 3.2970 22 6 4.8298 -5.8545 3.3118 23 1 5.0727 -6.6697 2.6303 24 6 4.4805 -6.3343 4.6971 25 6 3.9325 -5.4575 5.6146 26 6 3.6071 -5.8991 6.8835 27 6 3.8400 -7.2146 7.2385 28 6 4.3932 -8.0900 6.3227 29 6 4.7130 -7.6501 5.0519 30 6 3.8202 -4.8477 2.7359 31 1 -0.3634 -1.0276 -0.0005 32 1 -0.3634 0.5138 0.8900 33 1 -0.3634 0.5139 -0.8900 34 1 0.2146 2.3191 0.0093 35 1 0.4050 4.8505 -0.8400 36 1 0.9250 4.9838 2.0133 37 1 3.0187 6.2431 -1.4163 38 1 1.4306 7.5959 -0.1640 39 1 3.7895 4.6447 -0.0113 40 1 3.7673 -0.1452 2.0037 41 1 6.6456 -0.0434 0.9926 42 1 5.7813 1.2870 1.7997 43 1 6.1480 -0.2075 2.6939 44 1 4.9861 -2.1934 3.1345 45 1 5.8682 -4.1208 4.2129 46 1 6.8546 -5.0248 2.9839 47 1 3.7544 -4.4287 5.3386 48 1 3.1746 -5.2152 7.5988 49 1 3.5892 -7.5587 8.2310 50 1 4.5748 -9.1180 6.5998 51 1 5.1456 -8.3339 4.3366 52 1 3.1704 -5.2706 1.9697 53 1 3.2724 -4.2939 3.4984 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16147626_13428712.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:17 Heat of formation + Delta-G solvation = -53.037426 kcal Electronic energy + Delta-G solvation = -37666.701740 eV Core-core repulsion = 32691.065458 eV Total energy + Delta-G solvation = -4975.636282 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.143 amu Computer time = 1.58 seconds Orbital eigenvalues (eV) -42.02188 -41.48080 -40.52358 -39.39039 -39.14058 -38.51261 -37.75952 -36.90333 -34.97382 -33.12248 -31.85135 -31.68338 -31.40654 -31.16182 -28.59411 -26.90848 -26.70586 -26.36750 -24.95985 -23.70414 -23.57131 -22.91422 -22.33996 -21.60737 -20.38269 -19.65703 -18.82171 -18.53364 -18.33471 -18.06961 -17.52076 -17.21970 -16.88590 -16.49528 -16.37544 -16.28925 -16.22173 -15.90249 -15.78500 -15.64376 -15.56875 -15.29079 -14.89665 -14.49817 -14.40519 -14.24161 -14.20314 -14.11736 -13.95605 -13.86266 -13.59161 -13.45352 -13.28751 -13.10760 -12.80885 -12.71247 -12.65332 -12.53764 -12.35016 -12.28140 -12.07182 -11.91511 -11.80557 -11.68287 -11.63023 -11.45231 -11.35777 -10.70769 -10.53147 -10.11547 -9.85210 -9.79771 -9.53412 -9.44700 -5.02018 -0.35799 -0.04549 0.44812 0.52111 0.83149 1.24810 1.46723 1.62039 1.66829 1.95727 2.14444 2.21221 2.68175 2.85413 3.33106 3.45063 3.55786 3.57225 3.67438 3.72995 3.74166 3.80268 3.82578 3.92709 3.97228 3.99076 4.05835 4.06473 4.15691 4.19565 4.24458 4.27829 4.31116 4.42655 4.55635 4.57560 4.63731 4.64964 4.67172 4.68967 4.72027 4.74389 4.82088 4.83711 4.96813 5.01808 5.07004 5.11002 5.14454 5.18422 5.21304 5.22419 5.51747 5.60686 5.66452 5.75353 5.89742 6.14366 6.30490 6.49213 6.74272 7.15158 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.323 6.323 3 C 0.117 3.883 4 C -0.164 4.164 5 C -0.064 4.064 6 C -0.066 4.066 7 O -0.547 6.547 8 Si 0.765 3.235 9 C -0.130 4.130 10 C -0.017 4.017 11 Cl -0.036 7.036 12 C 0.054 3.946 13 O -0.311 6.311 14 C 0.076 3.924 15 C -0.175 4.175 16 C 0.518 3.482 17 O -0.567 6.567 18 N -0.700 5.700 19 C 0.120 3.880 20 H 0.095 0.905 21 C -0.120 4.120 22 C -0.068 4.068 23 H 0.103 0.897 24 C -0.076 4.076 25 C -0.124 4.124 26 C -0.128 4.128 27 C -0.138 4.138 28 C -0.131 4.131 29 C -0.131 4.131 30 C -0.141 4.141 31 H 0.112 0.888 32 H 0.076 0.924 33 H 0.066 0.934 34 H 0.157 0.843 35 H 0.119 0.881 36 H 0.398 0.602 37 H -0.286 1.286 38 H -0.292 1.292 39 H 0.162 0.838 40 H 0.106 0.894 41 H 0.058 0.942 42 H 0.086 0.914 43 H 0.102 0.898 44 H 0.418 0.582 45 H 0.104 0.896 46 H 0.082 0.918 47 H 0.137 0.863 48 H 0.136 0.864 49 H 0.132 0.868 50 H 0.131 0.869 51 H 0.129 0.871 52 H 0.062 0.938 53 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.598 2.589 8.590 8.991 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.236 6.236 3 C 0.070 3.930 4 C -0.183 4.183 5 C -0.065 4.065 6 C -0.176 4.176 7 O -0.355 6.355 8 Si 0.671 3.329 9 C -0.149 4.149 10 C -0.045 4.045 11 Cl -0.007 7.007 12 C 0.008 3.992 13 O -0.227 6.227 14 C 0.017 3.983 15 C -0.232 4.232 16 C 0.304 3.696 17 O -0.445 6.445 18 N -0.353 5.353 19 C 0.015 3.985 20 H 0.113 0.887 21 C -0.158 4.158 22 C -0.087 4.087 23 H 0.121 0.879 24 C -0.076 4.076 25 C -0.142 4.142 26 C -0.146 4.146 27 C -0.156 4.156 28 C -0.149 4.149 29 C -0.149 4.149 30 C -0.179 4.179 31 H 0.131 0.869 32 H 0.094 0.906 33 H 0.084 0.916 34 H 0.175 0.825 35 H 0.136 0.864 36 H 0.249 0.751 37 H -0.213 1.213 38 H -0.219 1.219 39 H 0.179 0.821 40 H 0.124 0.876 41 H 0.077 0.923 42 H 0.104 0.896 43 H 0.121 0.879 44 H 0.255 0.745 45 H 0.123 0.877 46 H 0.101 0.899 47 H 0.154 0.846 48 H 0.154 0.846 49 H 0.150 0.850 50 H 0.149 0.851 51 H 0.147 0.853 52 H 0.081 0.919 53 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -0.648 2.595 6.782 7.290 hybrid contribution -0.503 -0.483 -0.218 0.731 sum -1.150 2.112 6.564 6.991 Atomic orbital electron populations 1.23424 0.75986 1.05633 1.02790 1.86215 1.23620 1.25832 1.87930 1.19380 0.90919 0.85950 0.96710 1.21293 1.01553 0.90205 1.05273 1.20220 0.92872 0.95867 0.97530 1.25126 1.00963 1.00657 0.90899 1.86499 1.37038 1.96423 1.15586 0.93816 0.79283 0.73821 0.86002 1.20916 0.92779 0.97323 1.03835 1.20984 0.86269 0.93148 1.04064 1.98392 1.07803 1.98306 1.96193 1.17837 0.87036 0.85706 1.08581 1.86246 1.69837 1.38262 1.28389 1.22334 1.00116 0.90097 0.85715 1.22572 0.94304 1.03463 1.02896 1.20636 0.75505 0.89158 0.84311 1.90726 1.50347 1.73995 1.29442 1.45743 1.72458 1.07168 1.09926 1.22498 0.97549 0.78451 0.99976 0.88715 1.23398 0.98303 0.95806 0.98334 1.21299 0.97205 0.96917 0.93275 0.87903 1.19778 0.98741 0.93784 0.95308 1.21215 0.99286 1.00287 0.93371 1.21439 0.99842 0.96323 0.96962 1.21453 0.99601 0.94222 1.00298 1.21421 0.99036 1.00520 0.93905 1.21314 1.00645 0.95891 0.97046 1.23594 0.96820 0.96993 1.00502 0.86929 0.90568 0.91552 0.82533 0.86408 0.75141 1.21290 1.21944 0.82082 0.87620 0.92293 0.89566 0.87936 0.74453 0.87741 0.89889 0.84560 0.84568 0.85000 0.85060 0.85305 0.91911 0.88293 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 113.37 1.11 1.08 16 2 O -0.32 -2.03 10.28 -79.61 -0.82 -2.85 16 3 C 0.12 0.56 6.70 22.57 0.15 0.71 16 4 C -0.16 0.01 8.67 22.36 0.19 0.20 16 5 C -0.06 0.13 5.35 -19.86 -0.11 0.02 16 6 C -0.07 0.26 2.80 71.24 0.20 0.46 16 7 O -0.55 2.31 12.83 -148.98 -1.91 0.40 16 8 Si 0.77 -3.28 29.80 68.60 2.04 -1.24 16 9 C -0.13 0.19 8.45 22.30 0.19 0.38 16 10 C -0.02 -0.05 6.24 22.39 0.14 0.09 16 11 Cl -0.04 -0.08 24.90 -2.72 -0.07 -0.15 16 12 C 0.05 0.35 5.56 22.58 0.13 0.47 16 13 O -0.31 -3.20 8.55 -67.47 -0.58 -3.78 16 14 C 0.08 0.24 3.19 29.85 0.10 0.34 16 15 C -0.18 0.31 8.35 71.98 0.60 0.91 16 16 C 0.52 3.57 7.18 87.66 0.63 4.20 16 17 O -0.57 -10.19 16.11 15.98 0.26 -9.93 16 18 N -0.70 0.88 5.32 -440.04 -2.34 -1.46 16 19 C 0.12 -0.03 4.24 45.52 0.19 0.17 16 20 H 0.09 0.48 7.46 -2.39 -0.02 0.47 16 21 C -0.12 0.52 7.30 31.12 0.23 0.75 16 22 C -0.07 0.15 3.98 -11.01 -0.04 0.11 16 23 H 0.10 -0.23 8.09 -2.39 -0.02 -0.25 16 24 C -0.08 0.01 5.29 -19.86 -0.11 -0.09 16 25 C -0.12 0.16 8.60 22.27 0.19 0.35 16 26 C -0.13 0.09 10.05 22.27 0.22 0.31 16 27 C -0.14 -0.05 10.05 22.27 0.22 0.18 16 28 C -0.13 -0.12 10.05 22.27 0.22 0.10 16 29 C -0.13 -0.12 9.71 22.27 0.22 0.09 16 30 C -0.14 0.15 7.25 31.12 0.23 0.38 16 31 H 0.11 -0.46 8.14 -2.39 -0.02 -0.48 16 32 H 0.08 -0.44 7.65 -2.39 -0.02 -0.46 16 33 H 0.07 -0.25 7.67 -2.39 -0.02 -0.27 16 34 H 0.16 -0.48 6.30 -2.91 -0.02 -0.50 16 35 H 0.12 -0.40 7.96 -2.39 -0.02 -0.42 16 36 H 0.40 -4.92 8.70 -74.05 -0.64 -5.56 16 37 H -0.29 -0.41 7.11 99.48 0.71 0.30 16 38 H -0.29 -0.85 7.11 99.48 0.71 -0.14 16 39 H 0.16 -0.93 4.89 -2.91 -0.01 -0.94 16 40 H 0.11 -0.12 7.91 -2.39 -0.02 -0.14 16 41 H 0.06 0.12 8.14 -2.38 -0.02 0.10 16 42 H 0.09 -0.20 5.45 -2.39 -0.01 -0.22 16 43 H 0.10 -0.83 7.93 -2.39 -0.02 -0.85 16 44 H 0.42 -3.53 8.51 -92.71 -0.79 -4.32 16 45 H 0.10 -0.74 7.69 -2.39 -0.02 -0.75 16 46 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 47 H 0.14 -0.74 6.67 -2.91 -0.02 -0.75 16 48 H 0.14 -0.60 8.06 -2.91 -0.02 -0.63 16 49 H 0.13 -0.37 8.06 -2.91 -0.02 -0.39 16 50 H 0.13 -0.27 8.06 -2.91 -0.02 -0.29 16 51 H 0.13 -0.20 8.05 -2.91 -0.02 -0.22 16 52 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 53 H 0.10 -0.31 6.32 -2.39 -0.02 -0.32 16 Total: 0.00 -26.21 444.82 1.07 -25.13 By element: Atomic # 1 Polarization: -16.90 SS G_CDS: -0.42 Total: -17.32 kcal Atomic # 6 Polarization: 6.30 SS G_CDS: 4.91 Total: 11.20 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -2.34 Total: -1.46 kcal Atomic # 8 Polarization: -13.11 SS G_CDS: -3.05 Total: -16.16 kcal Atomic # 14 Polarization: -3.28 SS G_CDS: 2.04 Total: -1.24 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -0.07 Total: -0.15 kcal Total: -26.21 1.07 -25.13 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_13428712.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.904 kcal (2) G-P(sol) polarization free energy of solvation -26.206 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.110 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.073 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.134 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.037 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.58 seconds