Wall clock time and date at job start Sun Mar 7 2021 08:57:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86301 * 109.47228 * 2 1 4 4 C 1.50698 * 109.47454 * 120.00184 * 2 1 3 5 5 C 1.32696 * 124.68780 * 64.99557 * 4 2 1 6 6 C 1.44500 * 113.10118 * 179.74739 * 5 4 2 7 7 C 1.47042 * 123.49323 * 180.28197 * 6 5 4 8 8 O 1.21663 * 119.99992 * 180.19545 * 7 6 5 9 9 N 1.34771 * 120.00158 * 0.18840 * 7 6 5 10 10 C 1.46500 * 120.00193 * 179.97438 * 9 7 6 11 11 H 1.09003 * 112.84720 * 23.81386 * 10 9 7 12 12 C 1.53787 * 113.61474 * 155.00391 * 10 9 7 13 13 C 1.53776 * 87.08338 * 139.98323 * 12 10 9 14 14 H 1.09007 * 113.61248 * 89.20091 * 13 12 10 15 15 C 1.50692 * 113.61587 * 220.02028 * 13 12 10 16 16 C 1.38235 * 120.00021 * 59.72831 * 15 13 12 17 17 C 1.38239 * 120.00002 * 179.81313 * 16 15 13 18 18 C 1.38233 * 119.99937 * 0.38966 * 17 16 15 19 19 C 1.38237 * 120.00138 * 359.86511 * 18 17 16 20 20 C 1.38234 * 120.00027 * 240.00177 * 15 13 12 21 21 C 1.53783 * 113.61725 * 252.50048 * 10 9 7 22 22 C 1.36227 * 113.01799 * 0.43657 * 6 5 4 23 23 Cl 1.73599 * 124.61007 * 179.85055 * 22 6 5 24 24 S 1.70447 * 110.78585 * 359.57835 * 22 6 5 25 25 H 0.96703 * 114.00090 * 299.99693 * 1 2 3 26 26 H 1.08999 * 109.47311 * 239.99906 * 2 1 3 27 27 H 1.48492 * 110.00115 * 178.68094 * 3 2 1 28 28 H 1.48497 * 109.99941 * 300.00244 * 3 2 1 29 29 H 1.08004 * 123.44544 * 359.97438 * 5 4 2 30 30 H 0.97002 * 119.99739 * 0.02562 * 9 7 6 31 31 H 1.08997 * 113.61362 * 254.53751 * 12 10 9 32 32 H 1.09004 * 113.61288 * 25.43584 * 12 10 9 33 33 H 1.07998 * 120.00152 * 0.02562 * 16 15 13 34 34 H 1.07995 * 120.00174 * 180.23356 * 17 16 15 35 35 H 1.07997 * 120.00366 * 179.83697 * 18 17 16 36 36 H 1.08001 * 120.00320 * 179.97438 * 19 18 17 37 37 H 1.08001 * 120.00319 * 359.97374 * 20 15 13 38 38 H 1.08995 * 113.61709 * 334.56747 * 21 10 9 39 39 H 1.09000 * 113.60944 * 105.47466 * 21 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.7483 -1.9997 1.4857 6 6 2.3409 -2.4200 2.7347 7 6 2.2804 -3.8005 3.2376 8 8 2.7991 -4.0838 4.3010 9 7 1.6502 -4.7518 2.5206 10 6 1.5904 -6.1273 3.0213 11 1 1.7007 -6.1887 4.1040 12 6 0.3965 -6.9296 2.4773 13 6 1.3542 -8.1273 2.3630 14 1 1.3998 -8.7375 3.2651 15 6 1.1523 -8.9446 1.1132 16 6 1.2975 -8.3555 -0.1289 17 6 1.1160 -9.1062 -1.2754 18 6 0.7814 -10.4440 -1.1798 19 6 0.6310 -11.0319 0.0623 20 6 0.8162 -10.2821 1.2088 21 6 2.4960 -7.1031 2.2515 22 6 2.9585 -1.4042 3.3998 23 17 3.7638 -1.5723 4.9285 24 16 2.8398 0.0529 2.5235 25 1 -0.3933 0.4417 0.7651 26 1 1.7923 -0.5138 -0.8900 27 1 3.5345 1.7703 0.0321 28 1 1.5614 2.4679 -1.2084 29 1 1.2144 -2.6673 0.8255 30 1 1.2369 -4.5260 1.6726 31 1 -0.4001 -7.0755 3.2067 32 1 0.0306 -6.5698 1.5156 33 1 1.5561 -7.3096 -0.2036 34 1 1.2332 -8.6469 -2.2458 35 1 0.6370 -11.0299 -2.0755 36 1 0.3692 -12.0770 0.1370 37 1 0.6988 -10.7414 2.1792 38 1 2.7040 -6.7909 1.2282 39 1 3.3942 -7.3893 2.7988 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_13431040.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:22 Heat of formation + Delta-G solvation = 15.526311 kcal Electronic energy + Delta-G solvation = -24862.586424 eV Core-core repulsion = 21083.052776 eV Total energy + Delta-G solvation = -3779.533648 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.053 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.55122 -40.51851 -39.16820 -38.57139 -37.84754 -36.98951 -34.63950 -31.94779 -31.78704 -31.51029 -27.18460 -26.78442 -26.73513 -24.96543 -23.59951 -22.50524 -22.05453 -20.95458 -20.22805 -19.38430 -18.36729 -17.95429 -17.66162 -16.99921 -16.53519 -16.42693 -16.06563 -15.98794 -15.76335 -15.49780 -15.34480 -14.79682 -14.53165 -14.39814 -14.27280 -14.17421 -14.06617 -13.93482 -13.54961 -13.10352 -13.01979 -12.57523 -12.55839 -12.40149 -12.35486 -12.08276 -11.94385 -11.82487 -11.70132 -11.47004 -10.84910 -10.65110 -10.08646 -9.92193 -9.82809 -9.69743 -9.55882 -5.32445 -0.61003 -0.21976 0.41422 0.42107 0.49146 0.67978 1.01853 1.08536 1.43690 1.75709 2.19535 2.26489 2.82245 3.13000 3.38047 3.40782 3.63544 3.68311 3.79168 3.85011 3.88630 3.99783 4.09005 4.13053 4.20426 4.22973 4.35020 4.52725 4.57340 4.62915 4.65336 4.69383 4.75992 4.87311 4.92190 4.97210 5.06833 5.12788 5.19916 5.52139 5.56711 5.62995 5.71588 6.09022 6.30154 6.46126 7.21362 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.024 4.024 3 Si 0.651 3.349 4 C -0.236 4.236 5 C -0.070 4.070 6 C -0.160 4.160 7 C 0.577 3.423 8 O -0.518 6.518 9 N -0.714 5.714 10 C 0.125 3.875 11 H 0.120 0.880 12 C -0.135 4.135 13 C -0.071 4.071 14 H 0.103 0.897 15 C -0.069 4.069 16 C -0.118 4.118 17 C -0.118 4.118 18 C -0.124 4.124 19 C -0.117 4.117 20 C -0.116 4.116 21 C -0.145 4.145 22 C -0.114 4.114 23 Cl 0.027 6.973 24 S 0.236 5.764 25 H 0.383 0.617 26 H 0.128 0.872 27 H -0.235 1.235 28 H -0.229 1.229 29 H 0.156 0.844 30 H 0.400 0.600 31 H 0.080 0.920 32 H 0.089 0.911 33 H 0.120 0.880 34 H 0.121 0.879 35 H 0.121 0.879 36 H 0.122 0.878 37 H 0.122 0.878 38 H 0.089 0.911 39 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.565 2.012 -2.373 4.032 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.138 4.138 3 Si 0.550 3.450 4 C -0.353 4.353 5 C -0.100 4.100 6 C -0.179 4.179 7 C 0.362 3.638 8 O -0.394 6.394 9 N -0.365 5.365 10 C 0.020 3.980 11 H 0.137 0.863 12 C -0.173 4.173 13 C -0.090 4.090 14 H 0.121 0.879 15 C -0.070 4.070 16 C -0.136 4.136 17 C -0.136 4.136 18 C -0.142 4.142 19 C -0.135 4.135 20 C -0.134 4.134 21 C -0.183 4.183 22 C -0.261 4.261 23 Cl 0.056 6.944 24 S 0.500 5.500 25 H 0.230 0.770 26 H 0.145 0.855 27 H -0.158 1.158 28 H -0.151 1.151 29 H 0.174 0.826 30 H 0.235 0.765 31 H 0.098 0.902 32 H 0.107 0.893 33 H 0.138 0.862 34 H 0.139 0.861 35 H 0.139 0.861 36 H 0.140 0.860 37 H 0.140 0.860 38 H 0.107 0.893 39 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -1.023 3.565 -2.169 4.296 hybrid contribution -0.542 -2.104 -0.676 2.276 sum -1.565 1.461 -2.845 3.560 Atomic orbital electron populations 1.86540 1.16320 1.81654 1.49275 1.24429 0.85383 1.09144 0.94817 0.95077 0.82394 0.77266 0.90257 1.24796 1.08938 0.98741 1.02848 1.20995 0.99003 0.95023 0.94942 1.20245 1.05906 0.94839 0.96910 1.17438 0.78509 0.83679 0.84175 1.90879 1.45092 1.81853 1.21591 1.45806 1.57372 1.08853 1.24459 1.22561 0.96399 0.78836 1.00207 0.86259 1.23458 0.96866 0.94801 1.02220 1.21328 0.97087 0.94247 0.96293 0.87881 1.19638 0.99230 0.93969 0.94115 1.20983 1.00749 0.99845 0.91996 1.21166 0.99583 0.94411 0.98441 1.21200 1.00004 0.95275 0.97759 1.21197 0.99774 0.99991 0.92582 1.21092 0.99926 0.93650 0.98707 1.23620 0.97801 0.95295 1.01613 1.25533 1.03806 1.00484 0.96231 1.98443 1.75731 1.97289 1.22919 1.83284 1.50694 1.06448 1.09529 0.76953 0.85512 1.15843 1.15137 0.82625 0.76490 0.90169 0.89270 0.86218 0.86067 0.86080 0.85983 0.86010 0.89272 0.90477 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.13 12.88 -35.23 -0.45 0.68 16 2 C -0.02 0.06 2.94 36.00 0.11 0.17 16 3 Si 0.65 -1.70 30.92 -169.99 -5.26 -6.96 16 4 C -0.24 0.40 5.65 -36.20 -0.20 0.19 16 5 C -0.07 0.09 9.75 -39.00 -0.38 -0.29 16 6 C -0.16 -0.20 5.98 -104.59 -0.63 -0.83 16 7 C 0.58 1.49 7.79 -12.69 -0.10 1.40 16 8 O -0.52 -3.10 14.51 5.22 0.08 -3.02 16 9 N -0.71 0.27 5.33 -54.20 -0.29 -0.02 16 10 C 0.12 -0.05 4.24 -67.11 -0.28 -0.34 16 11 H 0.12 0.13 7.46 -51.93 -0.39 -0.25 16 12 C -0.14 0.23 7.30 -25.92 -0.19 0.04 16 13 C -0.07 0.07 3.98 -90.96 -0.36 -0.29 16 14 H 0.10 -0.15 8.09 -51.93 -0.42 -0.57 16 15 C -0.07 -0.02 5.29 -104.63 -0.55 -0.57 16 16 C -0.12 -0.02 8.60 -39.58 -0.34 -0.36 16 17 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 18 C -0.12 -0.07 10.05 -39.58 -0.40 -0.47 16 19 C -0.12 -0.07 10.05 -39.58 -0.40 -0.47 16 20 C -0.12 -0.07 9.71 -39.58 -0.38 -0.45 16 21 C -0.14 0.09 7.25 -25.92 -0.19 -0.10 16 22 C -0.11 -0.19 6.87 30.01 0.21 0.02 16 23 Cl 0.03 0.09 27.20 -51.86 -1.41 -1.32 16 24 S 0.24 -0.27 20.19 -107.50 -2.17 -2.44 16 25 H 0.38 -2.18 8.70 45.56 0.40 -1.78 16 26 H 0.13 -0.34 7.96 -51.93 -0.41 -0.75 16 27 H -0.23 0.12 7.11 56.52 0.40 0.52 16 28 H -0.23 -0.03 7.11 56.52 0.40 0.37 16 29 H 0.16 -0.51 7.10 -52.48 -0.37 -0.88 16 30 H 0.40 -1.12 7.27 -40.82 -0.30 -1.42 16 31 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.09 -0.20 7.69 -51.93 -0.40 -0.59 16 33 H 0.12 -0.17 6.67 -52.49 -0.35 -0.52 16 34 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 35 H 0.12 -0.11 8.06 -52.49 -0.42 -0.54 16 36 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 37 H 0.12 -0.10 8.05 -52.49 -0.42 -0.53 16 38 H 0.09 -0.08 6.32 -51.93 -0.33 -0.41 16 39 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 LS Contribution 356.52 15.07 5.37 5.37 Total: 0.00 -7.02 356.52 -12.93 -19.95 By element: Atomic # 1 Polarization: -5.12 SS G_CDS: -4.31 Total: -9.42 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: -4.49 Total: -2.81 kcal Atomic # 7 Polarization: 0.27 SS G_CDS: -0.29 Total: -0.02 kcal Atomic # 8 Polarization: -1.97 SS G_CDS: -0.38 Total: -2.35 kcal Atomic # 14 Polarization: -1.70 SS G_CDS: -5.26 Total: -6.96 kcal Atomic # 16 Polarization: -0.27 SS G_CDS: -2.17 Total: -2.44 kcal Atomic # 17 Polarization: 0.09 SS G_CDS: -1.41 Total: -1.32 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -7.02 -12.93 -19.95 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_13431040.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.476 kcal (2) G-P(sol) polarization free energy of solvation -7.021 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.456 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.929 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.950 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.526 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds