Wall clock time and date at job start Sun Mar 7 2021 08:57:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.34851 * 125.88567 * 245.02290 * 4 2 1 6 6 C 1.40896 * 107.41347 * 180.02562 * 5 4 2 7 7 C 1.34852 * 107.41486 * 359.97438 * 6 5 4 8 8 C 1.50698 * 125.88776 * 180.02562 * 7 6 5 9 9 C 1.50700 * 109.46832 * 84.98083 * 8 7 6 10 10 O 1.21278 * 120.00012 * 359.97438 * 9 8 7 11 11 N 1.34777 * 120.00375 * 180.02562 * 9 8 7 12 12 C 1.46496 * 120.00717 * 179.97438 * 11 9 8 13 13 H 1.09002 * 112.84913 * 336.19761 * 12 11 9 14 14 C 1.53783 * 113.61404 * 107.49873 * 12 11 9 15 15 C 1.53780 * 87.07836 * 139.98490 * 14 12 11 16 16 H 1.09007 * 113.61257 * 89.12262 * 15 14 12 17 17 C 1.50705 * 113.69227 * 220.00706 * 15 14 12 18 18 C 1.38229 * 119.99479 * 37.26488 * 17 15 14 19 19 C 1.38241 * 119.99691 * 179.74238 * 18 17 15 20 20 C 1.38243 * 119.99884 * 0.53360 * 19 18 17 21 21 C 1.38230 * 119.99787 * 359.74302 * 20 19 18 22 22 C 1.38233 * 119.99920 * 217.53820 * 17 15 14 23 23 C 1.53778 * 113.61829 * 205.00075 * 12 11 9 24 24 N 1.36336 * 108.22107 * 359.74112 * 7 6 5 25 25 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 26 26 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 27 27 H 1.48501 * 109.99918 * 178.67685 * 3 2 1 28 28 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 29 29 H 1.07995 * 126.29625 * 0.02562 * 5 4 2 30 30 H 1.07994 * 126.29310 * 179.97438 * 6 5 4 31 31 H 1.09000 * 109.47402 * 204.97514 * 8 7 6 32 32 H 1.09004 * 109.47569 * 324.98476 * 8 7 6 33 33 H 0.97007 * 119.99874 * 359.97438 * 11 9 8 34 34 H 1.08995 * 113.61711 * 254.53216 * 14 12 11 35 35 H 1.08998 * 113.61354 * 25.43885 * 14 12 11 36 36 H 1.07999 * 120.00746 * 359.97438 * 18 17 15 37 37 H 1.07998 * 120.00262 * 180.29520 * 19 18 17 38 38 H 1.08000 * 119.99530 * 179.76578 * 20 19 18 39 39 H 1.07995 * 119.99952 * 180.02562 * 21 20 19 40 40 H 1.07992 * 120.00499 * 0.02562 * 22 17 15 41 41 H 1.09002 * 113.61504 * 334.56713 * 23 12 11 42 42 H 1.09001 * 113.61484 * 105.47219 * 23 12 11 43 43 H 0.97008 * 125.64208 * 180.26309 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.6296 -0.1484 2.2381 6 6 2.8977 -1.1604 3.1811 7 6 2.3524 -2.3019 2.7141 8 6 2.3930 -3.6444 3.3975 9 6 1.2615 -3.7381 4.3884 10 8 0.4976 -2.8063 4.5264 11 7 1.0989 -4.8570 5.1220 12 6 -0.0007 -4.9479 6.0857 13 1 -0.3490 -3.9719 6.4238 14 6 -1.1335 -5.8880 5.6409 15 6 -1.2078 -6.3616 7.1020 16 1 -1.8875 -5.7726 7.7179 17 6 -1.4241 -7.8460 7.2472 18 6 -0.8158 -8.7223 6.3681 19 6 -1.0099 -10.0842 6.5045 20 6 -1.8213 -10.5690 7.5133 21 6 -2.4342 -9.6924 8.3888 22 6 -2.2355 -8.3308 8.2560 23 6 0.2648 -5.9381 7.2318 24 7 1.7525 -2.0306 1.5203 25 1 -0.3934 0.4418 0.7650 26 1 1.7924 -0.5139 -0.8899 27 1 3.5346 1.7702 0.0322 28 1 1.5616 2.4678 -1.2086 29 1 2.9285 0.8869 2.3091 30 1 3.4401 -1.0433 4.1075 31 1 2.2905 -4.4343 2.6533 32 1 3.3433 -3.7580 3.9194 33 1 1.7101 -5.6022 5.0119 34 1 -2.0288 -5.3647 5.3054 35 1 -0.8100 -6.6634 4.9465 36 1 -0.1857 -8.3433 5.5771 37 1 -0.5308 -10.7691 5.8207 38 1 -1.9760 -11.6328 7.6175 39 1 -3.0678 -10.0711 9.1771 40 1 -2.7146 -7.6459 8.9398 41 1 0.9706 -6.7273 6.9724 42 1 0.4983 -5.4553 8.1808 43 1 1.2793 -2.6716 0.9668 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_14644196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:29 Heat of formation + Delta-G solvation = 26.486891 kcal Electronic energy + Delta-G solvation = -24542.603017 eV Core-core repulsion = 20941.454811 eV Total energy + Delta-G solvation = -3601.148205 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.146 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.27743 -41.43332 -40.16323 -38.68643 -37.61518 -34.69930 -33.09916 -31.90093 -31.83886 -31.60946 -29.37321 -26.80884 -26.20036 -24.95032 -23.64374 -22.68342 -21.69738 -21.27294 -21.02269 -20.37691 -18.86677 -18.24450 -18.06975 -17.17925 -16.82424 -16.45583 -16.31625 -16.16844 -15.81841 -15.40706 -15.15618 -15.02623 -14.54775 -14.38870 -14.28020 -14.18064 -14.02820 -13.91224 -13.82031 -13.59897 -13.57999 -13.12960 -12.75352 -12.58849 -12.37352 -11.99268 -11.88573 -11.86370 -11.73471 -11.50102 -10.81623 -10.56846 -10.05951 -9.85323 -9.69410 -9.59006 -8.87988 -4.92962 0.39438 0.46576 1.18011 1.31557 1.63445 1.72919 1.95760 1.98013 2.32087 2.53194 2.79625 3.38271 3.50571 3.59323 3.64101 3.65576 3.82832 3.86977 3.93159 3.98551 4.02729 4.06706 4.12076 4.20803 4.35642 4.43356 4.49847 4.55055 4.59159 4.60927 4.66593 4.73239 4.84561 4.88967 4.93212 5.04368 5.10204 5.17692 5.33937 5.37559 5.50115 5.54167 5.60589 5.68868 6.06496 6.07998 6.22214 6.44427 6.58150 6.68279 7.23119 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.050 4.050 3 Si 0.719 3.281 4 C -0.011 4.011 5 C -0.187 4.187 6 C -0.173 4.173 7 C 0.036 3.964 8 C -0.073 4.073 9 C 0.512 3.488 10 O -0.521 6.521 11 N -0.723 5.723 12 C 0.123 3.877 13 H 0.117 0.883 14 C -0.145 4.145 15 C -0.071 4.071 16 H 0.102 0.898 17 C -0.070 4.070 18 C -0.118 4.118 19 C -0.118 4.118 20 C -0.124 4.124 21 C -0.117 4.117 22 C -0.116 4.116 23 C -0.135 4.135 24 N -0.535 5.535 25 H 0.383 0.617 26 H 0.109 0.891 27 H -0.255 1.255 28 H -0.256 1.256 29 H 0.142 0.858 30 H 0.136 0.864 31 H 0.099 0.901 32 H 0.117 0.883 33 H 0.401 0.599 34 H 0.075 0.925 35 H 0.088 0.912 36 H 0.120 0.880 37 H 0.121 0.879 38 H 0.121 0.879 39 H 0.122 0.878 40 H 0.122 0.878 41 H 0.089 0.911 42 H 0.079 0.921 43 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.647 -3.142 2.175 4.161 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.160 4.160 3 Si 0.619 3.381 4 C -0.124 4.124 5 C -0.212 4.212 6 C -0.198 4.198 7 C -0.078 4.078 8 C -0.114 4.114 9 C 0.298 3.702 10 O -0.396 6.396 11 N -0.375 5.375 12 C 0.019 3.981 13 H 0.135 0.865 14 C -0.184 4.184 15 C -0.090 4.090 16 H 0.121 0.879 17 C -0.070 4.070 18 C -0.136 4.136 19 C -0.136 4.136 20 C -0.142 4.142 21 C -0.135 4.135 22 C -0.134 4.134 23 C -0.173 4.173 24 N -0.130 5.130 25 H 0.231 0.769 26 H 0.126 0.874 27 H -0.179 1.179 28 H -0.181 1.181 29 H 0.159 0.841 30 H 0.154 0.846 31 H 0.117 0.883 32 H 0.135 0.865 33 H 0.235 0.765 34 H 0.094 0.906 35 H 0.107 0.893 36 H 0.138 0.862 37 H 0.139 0.861 38 H 0.139 0.861 39 H 0.140 0.860 40 H 0.140 0.860 41 H 0.107 0.893 42 H 0.098 0.902 43 H 0.248 0.752 Dipole moment (debyes) X Y Z Total from point charges 1.588 -2.248 1.191 2.999 hybrid contribution 0.095 -1.600 -0.338 1.638 sum 1.683 -3.848 0.853 4.286 Atomic orbital electron populations 1.86467 1.17318 1.81879 1.49560 1.24829 0.85033 1.10678 0.95468 0.93973 0.80867 0.76652 0.86577 1.20845 1.07132 0.84495 0.99954 1.20644 1.05718 0.99463 0.95380 1.20586 1.06669 0.91639 1.00872 1.19480 1.03497 0.95856 0.88970 1.20149 0.99297 0.94415 0.97516 1.20629 0.85919 0.82244 0.81446 1.90763 1.45122 1.37246 1.66469 1.45997 1.32296 1.18009 1.41195 1.22522 0.87112 0.99493 0.89019 0.86480 1.23612 0.99541 0.99187 0.96038 1.21331 0.97473 0.92237 0.97949 0.87934 1.19639 0.97259 0.94486 0.95593 1.20977 1.00298 0.93145 0.99182 1.21171 0.98695 0.95420 0.98326 1.21204 0.97558 0.99886 0.95572 1.21198 0.99635 0.93431 0.99254 1.21094 0.98609 0.95594 0.98079 1.23449 0.96248 0.98589 0.99049 1.41793 1.43678 1.09297 1.18221 0.76939 0.87400 1.17914 1.18075 0.84077 0.84586 0.88315 0.86490 0.76487 0.90625 0.89328 0.86228 0.86059 0.86064 0.85969 0.86005 0.89277 0.90240 0.75154 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.77 12.88 -35.23 -0.45 -1.22 16 2 C -0.05 -0.04 3.08 36.01 0.11 0.07 16 3 Si 0.72 -0.23 30.60 -169.99 -5.20 -5.43 16 4 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 5 C -0.19 -0.38 9.37 -39.78 -0.37 -0.75 16 6 C -0.17 -0.41 10.77 -39.78 -0.43 -0.84 16 7 C 0.04 0.05 5.66 -81.79 -0.46 -0.41 16 8 C -0.07 0.12 6.24 -29.04 -0.18 -0.06 16 9 C 0.51 0.35 7.82 -10.98 -0.09 0.26 16 10 O -0.52 -2.78 15.63 5.56 0.09 -2.69 16 11 N -0.72 1.35 5.35 -53.02 -0.28 1.06 16 12 C 0.12 -0.13 4.24 -67.12 -0.28 -0.41 16 13 H 0.12 0.10 7.46 -51.93 -0.39 -0.29 16 14 C -0.15 0.16 7.25 -25.92 -0.19 -0.03 16 15 C -0.07 0.10 3.98 -90.96 -0.36 -0.27 16 16 H 0.10 -0.17 8.09 -51.93 -0.42 -0.59 16 17 C -0.07 0.00 5.29 -104.62 -0.55 -0.55 16 18 C -0.12 0.03 8.63 -39.58 -0.34 -0.31 16 19 C -0.12 0.00 10.05 -39.58 -0.40 -0.40 16 20 C -0.12 -0.04 10.05 -39.58 -0.40 -0.43 16 21 C -0.12 -0.04 10.05 -39.58 -0.40 -0.44 16 22 C -0.12 -0.04 9.71 -39.58 -0.38 -0.42 16 23 C -0.14 0.29 7.30 -25.92 -0.19 0.11 16 24 N -0.54 -0.76 6.07 -5.44 -0.03 -0.80 16 25 H 0.38 -0.66 8.70 45.56 0.40 -0.26 16 26 H 0.11 0.08 7.96 -51.93 -0.41 -0.33 16 27 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 28 H -0.26 -0.64 7.11 56.52 0.40 -0.24 16 29 H 0.14 0.02 6.24 -52.49 -0.33 -0.31 16 30 H 0.14 0.16 8.06 -52.49 -0.42 -0.26 16 31 H 0.10 -0.38 8.14 -51.93 -0.42 -0.81 16 32 H 0.12 -0.44 8.14 -51.93 -0.42 -0.87 16 33 H 0.40 -1.86 8.73 -40.82 -0.36 -2.22 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 35 H 0.09 -0.13 6.31 -51.93 -0.33 -0.46 16 36 H 0.12 -0.23 6.65 -52.49 -0.35 -0.58 16 37 H 0.12 -0.19 8.06 -52.49 -0.42 -0.62 16 38 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 39 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 40 H 0.12 -0.13 8.05 -52.49 -0.42 -0.56 16 41 H 0.09 -0.25 7.71 -51.93 -0.40 -0.65 16 42 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 43 H 0.41 -0.06 8.96 -40.82 -0.37 -0.42 16 LS Contribution 360.39 15.07 5.43 5.43 Total: 0.00 -8.96 360.39 -11.86 -20.81 By element: Atomic # 1 Polarization: -5.77 SS G_CDS: -5.95 Total: -11.73 kcal Atomic # 6 Polarization: 0.01 SS G_CDS: -5.45 Total: -5.44 kcal Atomic # 7 Polarization: 0.58 SS G_CDS: -0.32 Total: 0.27 kcal Atomic # 8 Polarization: -3.54 SS G_CDS: -0.37 Total: -3.91 kcal Atomic # 14 Polarization: -0.23 SS G_CDS: -5.20 Total: -5.43 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -8.96 -11.86 -20.81 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_14644196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.299 kcal (2) G-P(sol) polarization free energy of solvation -8.957 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.342 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.855 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.812 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.487 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds