Wall clock time and date at job start Sun Mar 7 2021 08:57:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42909 * 1 3 3 Si 1.86299 * 109.47234 * 2 1 4 4 C 1.50702 * 109.46733 * 240.00465 * 2 1 3 5 5 C 1.31112 * 118.54741 * 119.98062 * 4 2 1 6 6 N 1.38966 * 121.87304 * 179.68169 * 5 4 2 7 7 C 1.47034 * 118.85702 * 13.17916 * 6 5 4 8 8 C 1.50696 * 109.82392 * 196.87846 * 7 6 5 9 9 O 1.21282 * 120.00080 * 19.13438 * 8 7 6 10 10 N 1.34769 * 120.00187 * 199.13736 * 8 7 6 11 11 C 1.46497 * 120.00237 * 179.97438 * 10 8 7 12 12 H 1.09002 * 112.84869 * 23.80211 * 11 10 8 13 13 C 1.53783 * 113.61583 * 154.99708 * 11 10 8 14 14 C 1.53782 * 87.08052 * 140.06279 * 13 11 10 15 15 H 1.09007 * 113.61417 * 89.20333 * 14 13 11 16 16 C 1.50701 * 113.61710 * 220.01937 * 14 13 11 17 17 C 1.38235 * 119.99808 * 238.47299 * 16 14 13 18 18 C 1.38243 * 119.99602 * 179.97438 * 17 16 14 19 19 C 1.38231 * 120.00070 * 0.07188 * 18 17 16 20 20 C 1.38234 * 119.99892 * 359.90902 * 19 18 17 21 21 C 1.38230 * 119.99865 * 58.45045 * 16 14 13 22 22 C 1.53779 * 87.17356 * 334.61081 * 14 13 11 23 23 C 1.53548 * 107.71054 * 316.44974 * 7 6 5 24 24 C 1.50205 * 118.54613 * 299.99932 * 4 2 1 25 25 H 0.96696 * 113.99512 * 59.99603 * 1 2 3 26 26 H 1.08997 * 109.47080 * 120.00442 * 2 1 3 27 27 H 1.48505 * 109.99819 * 60.00416 * 3 2 1 28 28 H 1.48501 * 109.99889 * 181.31891 * 3 2 1 29 29 H 1.07996 * 119.07722 * 359.59112 * 5 4 2 30 30 H 0.96998 * 120.58768 * 193.28688 * 6 5 4 31 31 H 1.08996 * 109.81868 * 76.01622 * 7 6 5 32 32 H 0.97003 * 119.99839 * 359.97438 * 10 8 7 33 33 H 1.09003 * 113.61329 * 25.52107 * 13 11 10 34 34 H 1.08993 * 113.69355 * 254.62431 * 13 11 10 35 35 H 1.08000 * 120.00616 * 359.70324 * 17 16 14 36 36 H 1.08001 * 119.99556 * 179.97438 * 18 17 16 37 37 H 1.07997 * 119.99650 * 179.97438 * 19 18 17 38 38 H 1.07999 * 119.99751 * 180.02562 * 20 19 18 39 39 H 1.08001 * 120.00371 * 0.02562 * 21 16 14 40 40 H 1.09005 * 113.61212 * 139.93895 * 22 14 13 41 41 H 1.08997 * 113.61549 * 270.83529 * 22 14 13 42 42 H 1.09001 * 109.62246 * 180.64110 * 23 7 6 43 43 H 1.08998 * 109.61668 * 301.19421 * 23 7 6 44 44 H 1.08996 * 109.33108 * 79.77425 * 24 4 2 45 45 H 1.09006 * 109.19004 * 320.20091 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 2.6828 -0.0458 -2.0748 6 7 3.1884 -0.6344 -3.2276 7 6 2.6445 -1.9302 -3.6600 8 6 3.5807 -2.5723 -4.6511 9 8 4.7361 -2.2095 -4.7169 10 7 3.1340 -3.5498 -5.4643 11 6 4.0440 -4.1737 -6.4281 12 1 5.0912 -4.0877 -6.1384 13 6 3.6314 -5.5992 -6.8313 14 6 4.0527 -5.2315 -8.2639 15 1 5.1021 -5.4361 -8.4765 16 6 3.1254 -5.7697 -9.3229 17 6 3.6133 -6.6082 -10.3075 18 6 2.7625 -7.1023 -11.2787 19 6 1.4242 -6.7566 -11.2659 20 6 0.9362 -5.9184 -10.2810 21 6 1.7868 -5.4251 -9.3093 22 6 3.7746 -3.7665 -7.8882 23 6 2.5130 -2.8202 -2.4158 24 6 1.5485 -2.1482 -1.4358 25 1 -0.3932 0.4417 -0.7650 26 1 1.7924 -0.5139 0.8899 27 1 1.5617 2.4678 1.2086 28 1 3.5347 1.7702 -0.0321 29 1 2.9143 0.9889 -1.8694 30 1 3.8893 -0.1989 -3.7376 31 1 1.6653 -1.7861 -4.1165 32 1 2.2100 -3.8402 -5.4115 33 1 2.5635 -5.7909 -6.7260 34 1 4.2475 -6.3774 -6.3811 35 1 4.6601 -6.8739 -10.3208 36 1 3.1439 -7.7571 -12.0482 37 1 0.7597 -7.1423 -12.0249 38 1 -0.1095 -5.6486 -10.2708 39 1 1.4055 -4.7699 -8.5400 40 1 4.5073 -3.0662 -8.2895 41 1 2.7461 -3.4562 -8.0724 42 1 2.1217 -3.7961 -2.7035 43 1 3.4893 -2.9384 -1.9456 44 1 0.5355 -2.1985 -1.8350 45 1 1.5856 -2.6690 -0.4789 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:31 Heat of formation + Delta-G solvation = 3.505190 kcal Electronic energy + Delta-G solvation = -25499.271170 eV Core-core repulsion = 21869.814925 eV Total energy + Delta-G solvation = -3629.456245 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.162 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.73857 -40.85514 -39.59574 -38.65962 -37.28994 -34.90670 -33.20740 -33.02427 -31.90692 -31.61762 -27.82569 -26.85457 -25.95750 -25.26203 -23.82940 -23.61307 -22.53689 -21.69375 -20.53327 -19.35880 -19.03817 -18.26165 -17.97218 -17.22012 -16.75436 -16.59620 -16.35840 -16.09301 -15.81293 -15.73460 -15.32468 -15.20701 -15.06603 -14.58884 -14.34442 -14.32589 -14.06594 -14.02658 -13.94372 -13.62711 -13.18590 -13.01385 -12.91665 -12.64881 -12.40772 -12.13076 -11.97562 -11.90588 -11.81647 -11.75378 -11.54809 -11.26998 -10.81058 -10.18298 -10.13718 -9.86586 -9.60893 -8.48113 -4.98777 0.37840 0.45367 1.30355 1.42356 1.47028 1.67324 1.84769 2.06081 2.58961 2.77944 3.31600 3.44230 3.56344 3.60019 3.62407 3.74730 3.80983 3.81546 3.94361 3.95081 4.04879 4.07873 4.19410 4.25327 4.34661 4.45825 4.52580 4.55202 4.56933 4.61319 4.67076 4.69381 4.73082 4.84186 4.88691 4.95846 5.01172 5.07726 5.12501 5.17569 5.26113 5.40324 5.52799 5.53103 5.59450 5.66729 6.05139 6.18670 6.36240 6.75203 6.81306 7.04313 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.042 4.042 3 Si 0.670 3.330 4 C -0.280 4.280 5 C 0.142 3.858 6 N -0.732 5.732 7 C 0.137 3.863 8 C 0.513 3.487 9 O -0.530 6.530 10 N -0.715 5.715 11 C 0.122 3.878 12 H 0.118 0.882 13 C -0.135 4.135 14 C -0.071 4.071 15 H 0.102 0.898 16 C -0.070 4.070 17 C -0.116 4.116 18 C -0.117 4.117 19 C -0.124 4.124 20 C -0.118 4.118 21 C -0.118 4.118 22 C -0.144 4.144 23 C -0.128 4.128 24 C -0.050 4.050 25 H 0.375 0.625 26 H 0.103 0.897 27 H -0.258 1.258 28 H -0.261 1.261 29 H 0.132 0.868 30 H 0.409 0.591 31 H 0.092 0.908 32 H 0.403 0.597 33 H 0.090 0.910 34 H 0.079 0.921 35 H 0.122 0.878 36 H 0.122 0.878 37 H 0.122 0.878 38 H 0.122 0.878 39 H 0.120 0.880 40 H 0.076 0.924 41 H 0.090 0.910 42 H 0.079 0.921 43 H 0.075 0.925 44 H 0.070 0.930 45 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.032 -1.309 -3.997 5.184 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.155 4.155 3 Si 0.573 3.427 4 C -0.290 4.290 5 C 0.021 3.979 6 N -0.365 5.365 7 C 0.027 3.973 8 C 0.299 3.701 9 O -0.406 6.406 10 N -0.366 5.366 11 C 0.017 3.983 12 H 0.135 0.865 13 C -0.173 4.173 14 C -0.089 4.089 15 H 0.121 0.879 16 C -0.071 4.071 17 C -0.134 4.134 18 C -0.135 4.135 19 C -0.142 4.142 20 C -0.136 4.136 21 C -0.136 4.136 22 C -0.182 4.182 23 C -0.167 4.167 24 C -0.087 4.087 25 H 0.222 0.778 26 H 0.121 0.879 27 H -0.183 1.183 28 H -0.187 1.187 29 H 0.149 0.851 30 H 0.246 0.754 31 H 0.109 0.891 32 H 0.238 0.762 33 H 0.108 0.892 34 H 0.098 0.902 35 H 0.140 0.860 36 H 0.140 0.860 37 H 0.140 0.860 38 H 0.140 0.860 39 H 0.138 0.862 40 H 0.095 0.905 41 H 0.108 0.892 42 H 0.097 0.903 43 H 0.093 0.907 44 H 0.088 0.912 45 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -1.671 -0.856 -3.082 3.609 hybrid contribution -0.039 -0.617 -0.091 0.625 sum -1.710 -1.473 -3.173 3.894 Atomic orbital electron populations 1.86471 1.18002 1.81606 1.49109 1.24705 0.84652 1.08362 0.97739 0.95194 0.80836 0.79128 0.87518 1.20979 1.11106 0.97419 0.99500 1.20358 0.95404 0.95533 0.86588 1.44288 1.43873 1.20682 1.27684 1.21000 0.96026 0.85800 0.94448 1.20663 0.88750 0.79912 0.80822 1.90737 1.18392 1.62142 1.69300 1.45929 1.14511 1.38341 1.37847 1.22606 0.95797 0.92618 0.87279 0.86461 1.23454 1.02538 0.96363 0.94989 1.21325 0.99066 0.96044 0.92505 0.87930 1.19627 0.93980 0.97456 0.95991 1.21094 0.99892 0.97631 0.94757 1.21201 0.93820 0.99822 0.98681 1.21207 0.95759 0.98361 0.98847 1.21172 0.99791 0.97630 0.94980 1.20970 0.93101 1.00361 0.99126 1.23638 1.03073 0.96119 0.95408 1.21885 1.01801 0.97914 0.95054 1.19903 0.98013 0.91889 0.98899 0.77827 0.87911 1.18299 1.18667 0.85084 0.75403 0.89069 0.76208 0.89161 0.90193 0.86029 0.85972 0.86047 0.86007 0.86206 0.90501 0.89187 0.90279 0.90657 0.91192 0.90916 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.37 12.78 -35.23 -0.45 -0.82 16 2 C -0.04 -0.01 2.83 36.01 0.10 0.09 16 3 Si 0.67 -0.29 29.68 -169.99 -5.05 -5.33 16 4 C -0.28 0.01 5.44 -101.33 -0.55 -0.54 16 5 C 0.14 -0.05 9.63 -16.06 -0.15 -0.21 16 6 N -0.73 0.08 5.47 -55.33 -0.30 -0.22 16 7 C 0.14 -0.16 3.36 -68.51 -0.23 -0.39 16 8 C 0.51 0.14 7.09 -10.99 -0.08 0.07 16 9 O -0.53 -2.28 15.68 5.56 0.09 -2.20 16 10 N -0.72 1.61 5.36 -52.93 -0.28 1.32 16 11 C 0.12 -0.19 4.24 -67.03 -0.28 -0.48 16 12 H 0.12 0.03 7.46 -51.93 -0.39 -0.36 16 13 C -0.14 0.35 7.30 -25.92 -0.19 0.16 16 14 C -0.07 0.13 3.98 -90.96 -0.36 -0.24 16 15 H 0.10 -0.21 8.09 -51.92 -0.42 -0.63 16 16 C -0.07 0.03 5.29 -104.63 -0.55 -0.53 16 17 C -0.12 0.00 9.71 -39.58 -0.38 -0.39 16 18 C -0.12 -0.01 10.05 -39.58 -0.40 -0.41 16 19 C -0.12 -0.01 10.05 -39.59 -0.40 -0.40 16 20 C -0.12 0.03 10.05 -39.58 -0.40 -0.37 16 21 C -0.12 0.07 8.54 -39.59 -0.34 -0.27 16 22 C -0.14 0.24 7.27 -25.83 -0.19 0.06 16 23 C -0.13 0.14 5.47 -26.43 -0.14 0.00 16 24 C -0.05 0.02 5.75 -28.10 -0.16 -0.14 16 25 H 0.37 -1.22 8.70 45.56 0.40 -0.82 16 26 H 0.10 0.13 7.96 -51.93 -0.41 -0.28 16 27 H -0.26 -0.81 7.11 56.52 0.40 -0.40 16 28 H -0.26 -0.54 7.10 56.52 0.40 -0.14 16 29 H 0.13 -0.24 4.37 -52.49 -0.23 -0.47 16 30 H 0.41 0.09 8.10 -40.82 -0.33 -0.25 16 31 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 32 H 0.40 -1.94 8.73 -40.82 -0.36 -2.30 16 33 H 0.09 -0.29 7.62 -51.93 -0.40 -0.69 16 34 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 35 H 0.12 -0.16 8.05 -52.49 -0.42 -0.59 16 36 H 0.12 -0.17 8.06 -52.49 -0.42 -0.59 16 37 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 38 H 0.12 -0.23 8.06 -52.49 -0.42 -0.65 16 39 H 0.12 -0.28 6.73 -52.49 -0.35 -0.64 16 40 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 41 H 0.09 -0.19 6.40 -51.93 -0.33 -0.52 16 42 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 43 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 44 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 45 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 LS Contribution 362.57 15.07 5.46 5.46 Total: 0.00 -7.49 362.57 -11.91 -19.39 By element: Atomic # 1 Polarization: -6.96 SS G_CDS: -6.67 Total: -13.63 kcal Atomic # 6 Polarization: 0.72 SS G_CDS: -4.71 Total: -3.98 kcal Atomic # 7 Polarization: 1.69 SS G_CDS: -0.59 Total: 1.10 kcal Atomic # 8 Polarization: -2.65 SS G_CDS: -0.36 Total: -3.01 kcal Atomic # 14 Polarization: -0.29 SS G_CDS: -5.05 Total: -5.33 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -7.49 -11.91 -19.39 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.900 kcal (2) G-P(sol) polarization free energy of solvation -7.485 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.415 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.910 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.395 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.505 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds