Wall clock time and date at job start Sun Mar 7 2021 08:57:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86300 * 109.47127 * 2 1 4 4 C 1.50704 * 109.46621 * 119.99775 * 2 1 3 5 5 C 1.34491 * 125.48759 * 209.99836 * 4 2 1 6 6 C 1.46756 * 106.35950 * 180.21219 * 5 4 2 7 7 C 1.47270 * 126.96589 * 179.78248 * 6 5 4 8 8 O 1.21628 * 119.99459 * 179.81428 * 7 6 5 9 9 N 1.34773 * 120.00192 * 359.82291 * 7 6 5 10 10 C 1.46498 * 119.99949 * 179.97438 * 9 7 6 11 11 H 1.09001 * 112.84835 * 336.18865 * 10 9 7 12 12 C 1.53778 * 113.61767 * 107.49708 * 10 9 7 13 13 C 1.53778 * 87.08302 * 139.98160 * 12 10 9 14 14 H 1.08999 * 113.61824 * 89.11891 * 13 12 10 15 15 C 1.50698 * 113.69301 * 220.01068 * 13 12 10 16 16 C 1.38236 * 119.99635 * 37.25870 * 15 13 12 17 17 C 1.38237 * 119.99466 * 179.79024 * 16 15 13 18 18 C 1.38234 * 120.00313 * 0.46274 * 17 16 15 19 19 C 1.38232 * 120.00150 * 359.77081 * 18 17 16 20 20 C 1.38232 * 119.99960 * 217.53533 * 15 13 12 21 21 C 1.53781 * 113.61280 * 204.99709 * 10 9 7 22 22 C 1.36329 * 106.06148 * 359.63256 * 6 5 4 23 23 C 1.51006 * 126.79233 * 180.11905 * 22 6 5 24 24 C 1.53388 * 108.25477 * 164.63597 * 23 22 6 25 25 C 1.53166 * 109.04648 * 48.46129 * 24 23 22 26 26 C 1.53135 * 109.52207 * 290.42804 * 25 24 23 27 27 N 1.35207 * 108.66141 * 0.38849 * 22 6 5 28 28 H 0.96710 * 113.99673 * 60.00132 * 1 2 3 29 29 H 1.08995 * 109.46639 * 239.99797 * 2 1 3 30 30 H 1.48504 * 109.99806 * 298.67958 * 3 2 1 31 31 H 1.48493 * 110.00125 * 59.99711 * 3 2 1 32 32 H 1.07995 * 126.82360 * 359.95206 * 5 4 2 33 33 H 0.96999 * 120.00219 * 359.97438 * 9 7 6 34 34 H 1.08997 * 113.61535 * 254.53172 * 12 10 9 35 35 H 1.08996 * 113.61413 * 25.43348 * 12 10 9 36 36 H 1.07995 * 120.00505 * 0.02562 * 16 15 13 37 37 H 1.08009 * 119.99905 * 180.25110 * 17 16 15 38 38 H 1.08007 * 120.00274 * 179.79098 * 18 17 16 39 39 H 1.07998 * 120.00519 * 180.02562 * 19 18 17 40 40 H 1.07997 * 120.00414 * 359.97438 * 20 15 13 41 41 H 1.08995 * 113.61650 * 334.56214 * 21 10 9 42 42 H 1.08996 * 113.61213 * 105.47115 * 21 10 9 43 43 H 1.09002 * 109.70372 * 284.32930 * 23 22 6 44 44 H 1.09005 * 109.70610 * 44.94621 * 23 22 6 45 45 H 1.09001 * 109.54356 * 168.32574 * 24 23 22 46 46 H 1.08992 * 109.54423 * 288.50274 * 24 23 22 47 47 H 1.09005 * 109.45989 * 50.44015 * 25 24 23 48 48 H 1.09001 * 109.46279 * 170.41258 * 25 24 23 49 49 H 1.08998 * 109.56514 * 170.83648 * 26 25 24 50 50 H 1.09004 * 109.56215 * 291.17769 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 3.0856 -0.4463 1.8681 6 6 3.1575 -1.3809 2.9972 7 6 4.2386 -1.4871 3.9916 8 8 4.1659 -2.3112 4.8832 9 7 5.3084 -0.6710 3.9137 10 6 6.3835 -0.7763 4.9032 11 1 6.0517 -1.2164 5.8435 12 6 7.6726 -1.4045 4.3478 13 6 8.4434 -0.3587 5.1706 14 1 8.6760 -0.6854 6.1841 15 6 9.6370 0.2167 4.4529 16 6 9.5760 0.4570 3.0930 17 6 10.6695 0.9888 2.4354 18 6 11.8272 1.2714 3.1360 19 6 11.8898 1.0266 4.4950 20 6 10.7948 0.4988 5.1534 21 6 7.1866 0.5231 5.0808 22 6 2.0189 -2.1287 2.9410 23 6 1.6148 -3.2335 3.8877 24 6 0.1223 -3.5208 3.6817 25 6 -0.1556 -3.6712 2.1829 26 6 -0.0048 -2.3112 1.4955 27 7 1.2884 -1.7250 1.8772 28 1 -0.3933 0.4417 -0.7652 29 1 1.7923 -0.5139 -0.8900 30 1 1.5879 2.4585 -1.2243 31 1 1.5615 2.4679 1.2084 32 1 3.8167 0.3019 1.5998 33 1 5.3664 -0.0140 3.2025 34 1 7.8372 -2.4294 4.6802 35 1 7.7881 -1.2841 3.2707 36 1 8.6729 0.2327 2.5449 37 1 10.6205 1.1804 1.3736 38 1 12.6827 1.6838 2.6216 39 1 12.7941 1.2478 5.0425 40 1 10.8439 0.3073 6.2152 41 1 7.1692 1.1704 4.2040 42 1 6.9589 1.0542 6.0049 43 1 2.1949 -4.1312 3.6738 44 1 1.7900 -2.9185 4.9164 45 1 -0.1460 -4.4434 4.1965 46 1 -0.4665 -2.6956 4.0819 47 1 0.5539 -4.3771 1.7511 48 1 -1.1704 -4.0413 2.0371 49 1 -0.0409 -2.4428 0.4141 50 1 -0.8123 -1.6508 1.8117 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_16915396.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:36 Heat of formation + Delta-G solvation = 21.469480 kcal Electronic energy + Delta-G solvation = -30890.810445 eV Core-core repulsion = 26850.143290 eV Total energy + Delta-G solvation = -4040.667155 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.178 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -42.66162 -41.23656 -39.82255 -38.45968 -38.06422 -36.87263 -34.39025 -33.43329 -31.82061 -31.57978 -31.17747 -29.41128 -26.78400 -26.64076 -25.86658 -24.51572 -23.86010 -23.46929 -22.10900 -21.59998 -21.00211 -20.32966 -19.28074 -18.63513 -18.14225 -18.05367 -16.92392 -16.83505 -16.45797 -16.23785 -16.00713 -15.72728 -15.59097 -15.32920 -15.21257 -15.09943 -14.98406 -14.59505 -14.29598 -14.25240 -14.19206 -14.04584 -13.88936 -13.74187 -13.41888 -13.18356 -12.98530 -12.89973 -12.45927 -12.41689 -12.25138 -12.15816 -12.01216 -11.85446 -11.80340 -11.71684 -11.59200 -11.34671 -10.83509 -10.54177 -9.83226 -9.75686 -9.50248 -9.43899 -8.89781 -5.04430 0.49294 0.56076 0.92782 1.01106 1.49428 1.53764 1.82801 2.00400 2.57293 2.76395 2.90224 2.98275 3.52005 3.55296 3.59931 3.71249 3.77133 3.82586 3.84067 3.84977 3.98355 4.09444 4.15577 4.17419 4.22652 4.29034 4.32571 4.35803 4.40136 4.46036 4.61112 4.62109 4.65819 4.72350 4.75929 4.78420 4.82238 4.86363 4.87647 4.95501 5.03883 5.08544 5.11048 5.15188 5.21392 5.21607 5.25423 5.38136 5.63681 5.69373 5.75315 5.80155 5.84388 6.15507 6.16123 6.23999 6.31647 6.83508 7.60086 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.051 4.051 3 Si 0.706 3.294 4 C 0.034 3.966 5 C -0.167 4.167 6 C -0.234 4.234 7 C 0.596 3.404 8 O -0.550 6.550 9 N -0.718 5.718 10 C 0.126 3.874 11 H 0.116 0.884 12 C -0.144 4.144 13 C -0.072 4.072 14 H 0.101 0.899 15 C -0.068 4.068 16 C -0.117 4.117 17 C -0.118 4.118 18 C -0.126 4.126 19 C -0.118 4.118 20 C -0.117 4.117 21 C -0.136 4.136 22 C 0.118 3.882 23 C -0.055 4.055 24 C -0.129 4.129 25 C -0.140 4.140 26 C 0.114 3.886 27 N -0.424 5.424 28 H 0.384 0.616 29 H 0.078 0.922 30 H -0.259 1.259 31 H -0.252 1.252 32 H 0.153 0.847 33 H 0.400 0.600 34 H 0.074 0.926 35 H 0.089 0.911 36 H 0.122 0.878 37 H 0.122 0.878 38 H 0.120 0.880 39 H 0.121 0.879 40 H 0.121 0.879 41 H 0.089 0.911 42 H 0.077 0.923 43 H 0.088 0.912 44 H 0.100 0.900 45 H 0.079 0.921 46 H 0.068 0.932 47 H 0.074 0.926 48 H 0.087 0.913 49 H 0.091 0.909 50 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.153 1.431 -4.160 4.402 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.160 4.160 3 Si 0.605 3.395 4 C -0.075 4.075 5 C -0.191 4.191 6 C -0.243 4.243 7 C 0.386 3.614 8 O -0.429 6.429 9 N -0.368 5.368 10 C 0.021 3.979 11 H 0.134 0.866 12 C -0.183 4.183 13 C -0.091 4.091 14 H 0.119 0.881 15 C -0.068 4.068 16 C -0.135 4.135 17 C -0.136 4.136 18 C -0.144 4.144 19 C -0.136 4.136 20 C -0.135 4.135 21 C -0.174 4.174 22 C 0.001 3.999 23 C -0.092 4.092 24 C -0.167 4.167 25 C -0.178 4.178 26 C -0.007 4.007 27 N -0.100 5.100 28 H 0.232 0.768 29 H 0.096 0.904 30 H -0.184 1.184 31 H -0.176 1.176 32 H 0.170 0.830 33 H 0.235 0.765 34 H 0.093 0.907 35 H 0.108 0.892 36 H 0.140 0.860 37 H 0.140 0.860 38 H 0.138 0.862 39 H 0.139 0.861 40 H 0.139 0.861 41 H 0.108 0.892 42 H 0.096 0.904 43 H 0.107 0.893 44 H 0.118 0.882 45 H 0.098 0.902 46 H 0.087 0.913 47 H 0.093 0.907 48 H 0.106 0.894 49 H 0.109 0.891 50 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -0.381 1.252 -3.104 3.368 hybrid contribution -0.996 0.240 -1.097 1.501 sum -1.377 1.492 -4.201 4.666 Atomic orbital electron populations 1.86537 1.17894 1.80307 1.50230 1.24496 0.84201 1.11031 0.96309 0.94642 0.91374 0.72912 0.80596 1.19510 0.95185 0.94883 0.97917 1.21537 0.97968 1.02796 0.96767 1.19792 0.98001 1.04867 1.01664 1.17326 0.80706 0.80023 0.83380 1.90759 1.79333 1.36785 1.35988 1.45715 1.20566 1.38944 1.31551 1.22462 0.85040 0.96891 0.93502 0.86580 1.23616 0.94952 0.99139 1.00602 1.21339 0.91340 0.96854 0.99565 0.88064 1.19661 0.94705 0.98700 0.93767 1.21008 0.98760 0.99710 0.94027 1.21168 0.93417 0.99052 0.99964 1.21189 0.98161 1.00427 0.94579 1.21185 0.98547 0.99110 0.94787 1.21089 0.92930 0.99544 0.99909 1.23454 0.94197 0.96478 1.03259 1.20384 0.91362 0.97999 0.90198 1.20509 0.95297 0.95100 0.98341 1.21723 0.96330 1.03018 0.95615 1.21961 1.03572 0.95940 0.96281 1.22035 0.82978 0.94692 1.00960 1.43816 1.17476 1.27195 1.21481 0.76772 0.90388 1.18392 1.17589 0.82982 0.76511 0.90682 0.89236 0.86011 0.86046 0.86162 0.86086 0.86092 0.89246 0.90402 0.89337 0.88184 0.90212 0.91325 0.90729 0.89418 0.89110 0.89603 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.35 10.65 -35.23 -0.38 -0.02 16 2 C -0.05 0.05 2.98 36.01 0.11 0.16 16 3 Si 0.71 -1.25 31.11 -169.99 -5.29 -6.53 16 4 C 0.03 0.05 6.18 -81.88 -0.51 -0.46 16 5 C -0.17 -0.14 9.09 -37.47 -0.34 -0.48 16 6 C -0.23 -0.74 6.28 -103.47 -0.65 -1.39 16 7 C 0.60 2.29 7.81 -12.59 -0.10 2.19 16 8 O -0.55 -3.78 14.94 5.25 0.08 -3.70 16 9 N -0.72 -0.48 5.35 -54.14 -0.29 -0.77 16 10 C 0.13 0.04 4.24 -67.12 -0.28 -0.24 16 11 H 0.12 0.23 7.46 -51.93 -0.39 -0.16 16 12 C -0.14 0.02 7.25 -25.92 -0.19 -0.17 16 13 C -0.07 0.04 3.98 -90.96 -0.36 -0.32 16 14 H 0.10 -0.10 8.09 -51.93 -0.42 -0.52 16 15 C -0.07 -0.03 5.29 -104.63 -0.55 -0.59 16 16 C -0.12 -0.02 8.63 -39.58 -0.34 -0.36 16 17 C -0.12 -0.04 10.05 -39.58 -0.40 -0.44 16 18 C -0.13 -0.08 10.05 -39.59 -0.40 -0.48 16 19 C -0.12 -0.09 10.05 -39.58 -0.40 -0.49 16 20 C -0.12 -0.09 9.71 -39.58 -0.38 -0.48 16 21 C -0.14 0.16 7.30 -25.92 -0.19 -0.03 16 22 C 0.12 0.38 6.57 -81.64 -0.54 -0.16 16 23 C -0.05 -0.11 5.31 -27.53 -0.15 -0.26 16 24 C -0.13 0.01 5.98 -26.44 -0.16 -0.14 16 25 C -0.14 0.13 5.92 -26.58 -0.16 -0.03 16 26 C 0.11 0.02 5.32 -3.69 -0.02 0.00 16 27 N -0.42 -0.92 3.11 -107.37 -0.33 -1.25 16 28 H 0.38 -1.71 8.74 45.56 0.40 -1.32 16 29 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 30 H -0.26 0.01 7.11 56.52 0.40 0.41 16 31 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 32 H 0.15 -0.41 6.52 -52.49 -0.34 -0.76 16 33 H 0.40 -0.73 7.85 -40.82 -0.32 -1.05 16 34 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 35 H 0.09 -0.05 6.31 -51.93 -0.33 -0.38 16 36 H 0.12 -0.18 6.65 -52.49 -0.35 -0.53 16 37 H 0.12 -0.17 8.06 -52.48 -0.42 -0.59 16 38 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 39 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 40 H 0.12 -0.07 8.05 -52.49 -0.42 -0.49 16 41 H 0.09 -0.16 7.71 -51.93 -0.40 -0.56 16 42 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 43 H 0.09 0.18 8.14 -51.93 -0.42 -0.24 16 44 H 0.10 0.32 7.42 -51.93 -0.39 -0.06 16 45 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 46 H 0.07 0.02 8.12 -51.93 -0.42 -0.40 16 47 H 0.07 -0.04 8.11 -51.93 -0.42 -0.47 16 48 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 49 H 0.09 -0.04 7.69 -51.93 -0.40 -0.44 16 50 H 0.09 0.05 8.00 -51.93 -0.42 -0.37 16 LS Contribution 396.94 15.07 5.98 5.98 Total: 0.00 -8.39 396.94 -13.84 -22.22 By element: Atomic # 1 Polarization: -4.15 SS G_CDS: -7.61 Total: -11.76 kcal Atomic # 6 Polarization: 1.83 SS G_CDS: -6.00 Total: -4.17 kcal Atomic # 7 Polarization: -1.39 SS G_CDS: -0.62 Total: -2.02 kcal Atomic # 8 Polarization: -3.43 SS G_CDS: -0.30 Total: -3.73 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.29 Total: -6.53 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -8.39 -13.84 -22.22 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_16915396.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.694 kcal (2) G-P(sol) polarization free energy of solvation -8.389 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.306 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.836 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.225 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.469 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds