Wall clock time and date at job start Sun Mar 7 2021 08:57:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86297 * 109.47241 * 2 1 4 4 C 1.50705 * 109.47388 * 120.00139 * 2 1 3 5 5 C 1.38709 * 120.02672 * 75.01909 * 4 2 1 6 6 O 1.35895 * 120.05826 * 359.96119 * 5 4 2 7 7 C 1.42904 * 117.00128 * 180.02562 * 6 5 4 8 8 C 1.50703 * 109.47031 * 179.97438 * 7 6 5 9 9 O 1.21278 * 120.00089 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99605 * 180.02562 * 8 7 6 11 11 C 1.46501 * 119.99557 * 180.02562 * 10 8 7 12 12 H 1.08998 * 112.85470 * 25.33033 * 11 10 8 13 13 C 1.53784 * 113.61539 * 156.53125 * 11 10 8 14 14 C 1.53771 * 87.08551 * 139.97650 * 13 11 10 15 15 H 1.09002 * 113.61616 * 89.19944 * 14 13 11 16 16 C 1.50697 * 113.61593 * 220.01873 * 14 13 11 17 17 C 1.38239 * 120.00259 * 59.72555 * 16 14 13 18 18 C 1.38228 * 120.00156 * 179.81062 * 17 16 14 19 19 C 1.38239 * 119.99871 * 0.39997 * 18 17 16 20 20 C 1.38234 * 120.00328 * 359.85095 * 19 18 17 21 21 C 1.38231 * 119.99632 * 359.96112 * 20 19 18 22 22 C 1.53782 * 113.61273 * 254.13343 * 11 10 8 23 23 C 1.38759 * 119.88803 * 179.97438 * 5 4 2 24 24 C 1.38126 * 119.94113 * 359.97438 * 23 5 4 25 25 C 1.38290 * 120.05768 * 359.97438 * 24 23 5 26 26 C 1.38164 * 120.02639 * 255.00220 * 4 2 1 27 27 H 0.96706 * 113.99833 * 180.02562 * 1 2 3 28 28 H 1.09006 * 109.47457 * 240.00019 * 2 1 3 29 29 H 1.48501 * 110.00211 * 179.97438 * 3 2 1 30 30 H 1.48502 * 109.99981 * 301.31937 * 3 2 1 31 31 H 1.09000 * 109.46735 * 300.00020 * 7 6 5 32 32 H 1.09002 * 109.46782 * 59.99820 * 7 6 5 33 33 H 0.97002 * 120.00324 * 359.97438 * 10 8 7 34 34 H 1.09004 * 113.61005 * 254.53257 * 13 11 10 35 35 H 1.09000 * 113.61377 * 25.42116 * 13 11 10 36 36 H 1.07998 * 119.99725 * 0.02562 * 17 16 14 37 37 H 1.07995 * 120.00415 * 180.22670 * 18 17 16 38 38 H 1.08001 * 119.99850 * 179.83506 * 19 18 17 39 39 H 1.07995 * 120.00159 * 179.97438 * 20 19 18 40 40 H 1.08006 * 120.00133 * 179.97438 * 21 20 19 41 41 H 1.09002 * 113.61368 * 334.56736 * 22 11 10 42 42 H 1.08999 * 113.61852 * 105.47265 * 22 11 10 43 43 H 1.07998 * 120.02723 * 180.02562 * 23 5 4 44 44 H 1.07995 * 119.97120 * 179.97438 * 24 23 5 45 45 H 1.07995 * 119.94278 * 180.27458 * 25 24 23 46 46 H 1.08005 * 119.97654 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.8701 -2.0941 1.3067 6 8 1.3563 -2.8107 0.2727 7 6 1.3241 -4.2317 0.4208 8 6 0.7257 -4.8521 -0.8154 9 8 0.3621 -4.1469 -1.7326 10 7 0.5936 -6.1906 -0.9010 11 6 0.0124 -6.7938 -2.1030 12 1 0.1306 -6.1702 -2.9891 13 6 0.4287 -8.2582 -2.3203 14 6 -1.0202 -8.5224 -2.7623 15 1 -1.1854 -8.3731 -3.8293 16 6 -1.5749 -9.8312 -2.2618 17 6 -1.6518 -10.0751 -0.9033 18 6 -2.1642 -11.2740 -0.4442 19 6 -2.5921 -12.2324 -1.3438 20 6 -2.5104 -11.9907 -2.7024 21 6 -2.0016 -10.7902 -3.1614 22 6 -1.4216 -7.3113 -1.9007 23 6 2.3340 -2.7453 2.4408 24 6 2.8559 -2.0146 3.4904 25 6 2.9169 -0.6353 3.4114 26 6 2.4537 0.0159 2.2833 27 1 -0.3933 -0.8835 0.0004 28 1 1.7923 -0.5138 -0.8900 29 1 3.5349 1.7701 0.0006 30 1 1.5354 2.4771 -1.1921 31 1 2.3384 -4.6054 0.5608 32 1 0.7177 -4.4929 1.2880 33 1 0.8840 -6.7547 -0.1672 34 1 1.1597 -8.3905 -3.1180 35 1 0.7059 -8.7743 -1.4011 36 1 -1.3148 -9.3274 -0.2006 37 1 -2.2277 -11.4631 0.6171 38 1 -2.9900 -13.1702 -0.9852 39 1 -2.8443 -12.7397 -3.4052 40 1 -1.9373 -10.6015 -4.2229 41 1 -1.6512 -7.5681 -0.8665 42 1 -2.1824 -6.6803 -2.3602 43 1 2.2877 -3.8225 2.5024 44 1 3.2167 -2.5209 4.3734 45 1 3.3294 -0.0662 4.2313 46 1 2.5023 1.0932 2.2242 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:39 Heat of formation + Delta-G solvation = -23.761528 kcal Electronic energy + Delta-G solvation = -28066.546019 eV Core-core repulsion = 24081.736457 eV Total energy + Delta-G solvation = -3984.809562 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.151 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -41.80815 -41.35348 -40.29229 -38.94692 -38.25482 -37.30129 -34.88011 -32.73818 -32.03127 -31.81117 -31.24887 -29.52129 -26.87745 -26.56755 -25.99936 -23.83165 -23.59990 -22.62989 -22.45328 -21.68109 -20.47614 -19.48167 -18.41634 -18.24949 -18.01677 -17.58246 -17.28599 -16.83162 -16.65804 -16.51106 -15.95283 -15.74388 -15.59520 -15.34486 -15.26961 -15.13030 -14.64760 -14.41101 -14.28895 -14.08197 -13.97912 -13.83696 -13.64217 -13.47546 -13.16321 -12.77557 -12.68309 -12.57282 -12.41962 -12.27564 -11.92768 -11.89260 -11.78755 -11.56626 -11.14016 -10.97220 -10.87409 -10.22286 -9.98492 -9.87973 -9.62351 -9.27648 -4.78676 0.20167 0.34480 0.36450 0.44092 1.35693 1.39597 1.53195 1.75206 2.13416 2.46624 2.65521 2.76541 3.27544 3.38884 3.52886 3.58561 3.60833 3.73830 3.76811 3.78306 3.82429 3.93040 4.00127 4.03505 4.06414 4.07738 4.18046 4.22277 4.28860 4.44133 4.45907 4.51100 4.53031 4.59352 4.62166 4.67449 4.81761 4.88662 4.91022 4.98734 5.06053 5.10480 5.19205 5.31494 5.36441 5.45748 5.51461 5.58154 5.62773 5.65531 6.03811 6.14893 6.29094 6.74621 7.00906 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.073 4.073 3 Si 0.744 3.256 4 C -0.140 4.140 5 C 0.134 3.866 6 O -0.291 6.291 7 C 0.040 3.960 8 C 0.517 3.483 9 O -0.511 6.511 10 N -0.717 5.717 11 C 0.124 3.876 12 H 0.118 0.882 13 C -0.135 4.135 14 C -0.070 4.070 15 H 0.103 0.897 16 C -0.070 4.070 17 C -0.118 4.118 18 C -0.118 4.118 19 C -0.124 4.124 20 C -0.117 4.117 21 C -0.115 4.115 22 C -0.145 4.145 23 C -0.207 4.207 24 C -0.076 4.076 25 C -0.147 4.147 26 C -0.071 4.071 27 H 0.368 0.632 28 H 0.074 0.926 29 H -0.252 1.252 30 H -0.256 1.256 31 H 0.094 0.906 32 H 0.096 0.904 33 H 0.402 0.598 34 H 0.080 0.920 35 H 0.090 0.910 36 H 0.120 0.880 37 H 0.122 0.878 38 H 0.122 0.878 39 H 0.123 0.877 40 H 0.122 0.878 41 H 0.090 0.910 42 H 0.078 0.922 43 H 0.129 0.871 44 H 0.129 0.871 45 H 0.132 0.868 46 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.668 -4.765 4.870 7.015 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.182 4.182 3 Si 0.643 3.357 4 C -0.141 4.141 5 C 0.089 3.911 6 O -0.204 6.204 7 C -0.039 4.039 8 C 0.301 3.699 9 O -0.385 6.385 10 N -0.370 5.370 11 C 0.020 3.980 12 H 0.136 0.864 13 C -0.173 4.173 14 C -0.089 4.089 15 H 0.122 0.878 16 C -0.070 4.070 17 C -0.136 4.136 18 C -0.136 4.136 19 C -0.142 4.142 20 C -0.135 4.135 21 C -0.133 4.133 22 C -0.183 4.183 23 C -0.226 4.226 24 C -0.094 4.094 25 C -0.165 4.165 26 C -0.088 4.088 27 H 0.215 0.785 28 H 0.092 0.908 29 H -0.177 1.177 30 H -0.181 1.181 31 H 0.112 0.888 32 H 0.113 0.887 33 H 0.237 0.763 34 H 0.099 0.901 35 H 0.108 0.892 36 H 0.138 0.862 37 H 0.140 0.860 38 H 0.140 0.860 39 H 0.141 0.859 40 H 0.140 0.860 41 H 0.108 0.892 42 H 0.096 0.904 43 H 0.147 0.853 44 H 0.147 0.853 45 H 0.149 0.851 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 1.886 -2.913 3.567 4.976 hybrid contribution 0.156 -2.441 -0.026 2.446 sum 2.041 -5.354 3.541 6.736 Atomic orbital electron populations 1.86692 1.16824 1.33412 1.97156 1.25374 0.84999 1.12811 0.94974 0.93156 0.78523 0.76250 0.87770 1.19733 1.04922 0.90619 0.98784 1.18833 0.94594 0.90754 0.86919 1.86103 1.77872 1.17322 1.39064 1.22492 1.02687 0.80994 0.97698 1.20058 0.78948 0.82700 0.88170 1.90789 1.47535 1.61047 1.39119 1.45816 1.64472 1.06155 1.20568 1.22594 0.93374 0.93263 0.88792 0.86371 1.23453 0.96662 0.94525 1.02641 1.21350 0.95594 0.91636 1.00345 0.87844 1.19624 0.98894 0.95126 0.93406 1.20971 1.00362 0.97294 0.94969 1.21167 0.98767 0.93872 0.99780 1.21211 1.00046 0.99446 0.93459 1.21200 0.99258 0.97223 0.95819 1.21096 0.99032 0.93661 0.99550 1.23653 0.97297 0.96419 1.00955 1.21259 1.06194 1.00367 0.94777 1.21025 0.96544 0.94119 0.97729 1.21121 1.02244 0.94584 0.98586 1.20864 0.96354 0.99293 0.92303 0.78474 0.90815 1.17668 1.18068 0.88768 0.88657 0.76287 0.90111 0.89159 0.86232 0.86027 0.86038 0.85947 0.85999 0.89164 0.90365 0.85293 0.85287 0.85053 0.84518 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.20 12.65 -35.23 -0.45 -2.65 16 2 C -0.07 -0.23 2.33 36.01 0.08 -0.14 16 3 Si 0.74 1.12 30.17 -169.99 -5.13 -4.01 16 4 C -0.14 -0.32 5.28 -104.47 -0.55 -0.87 16 5 C 0.13 0.24 6.62 -39.21 -0.26 -0.02 16 6 O -0.29 -0.66 8.57 -39.32 -0.34 -1.00 16 7 C 0.04 -0.06 5.22 36.01 0.19 0.13 16 8 C 0.52 0.42 7.91 -10.99 -0.09 0.33 16 9 O -0.51 -2.93 16.12 -14.35 -0.23 -3.17 16 10 N -0.72 1.59 5.36 -53.02 -0.28 1.30 16 11 C 0.12 -0.17 4.21 -67.12 -0.28 -0.46 16 12 H 0.12 0.05 7.50 -51.93 -0.39 -0.34 16 13 C -0.13 0.35 7.29 -25.92 -0.19 0.16 16 14 C -0.07 0.12 3.98 -90.87 -0.36 -0.24 16 15 H 0.10 -0.20 8.09 -51.93 -0.42 -0.62 16 16 C -0.07 0.02 5.29 -104.62 -0.55 -0.53 16 17 C -0.12 0.07 8.60 -39.58 -0.34 -0.27 16 18 C -0.12 0.03 10.05 -39.58 -0.40 -0.37 16 19 C -0.12 -0.01 10.05 -39.58 -0.40 -0.41 16 20 C -0.12 -0.02 10.05 -39.59 -0.40 -0.42 16 21 C -0.12 -0.01 9.71 -39.58 -0.38 -0.39 16 22 C -0.14 0.21 7.27 -25.83 -0.19 0.02 16 23 C -0.21 0.05 9.04 -39.43 -0.36 -0.30 16 24 C -0.08 0.05 10.04 -39.60 -0.40 -0.34 16 25 C -0.15 0.06 10.04 -39.56 -0.40 -0.33 16 26 C -0.07 -0.04 8.66 -39.61 -0.34 -0.38 16 27 H 0.37 1.05 8.61 45.56 0.39 1.45 16 28 H 0.07 0.31 7.83 -51.93 -0.41 -0.09 16 29 H -0.25 -0.64 7.11 56.52 0.40 -0.24 16 30 H -0.26 -1.15 7.11 56.52 0.40 -0.75 16 31 H 0.09 -0.34 7.66 -51.93 -0.40 -0.74 16 32 H 0.10 -0.37 7.66 -51.93 -0.40 -0.77 16 33 H 0.40 -2.14 8.71 -40.82 -0.36 -2.50 16 34 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 35 H 0.09 -0.30 7.68 -51.93 -0.40 -0.70 16 36 H 0.12 -0.28 6.68 -52.49 -0.35 -0.63 16 37 H 0.12 -0.23 8.06 -52.49 -0.42 -0.65 16 38 H 0.12 -0.17 8.06 -52.49 -0.42 -0.60 16 39 H 0.12 -0.17 8.06 -52.49 -0.42 -0.59 16 40 H 0.12 -0.16 8.06 -52.48 -0.42 -0.58 16 41 H 0.09 -0.18 6.34 -51.93 -0.33 -0.50 16 42 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 43 H 0.13 -0.37 6.30 -52.49 -0.33 -0.71 16 44 H 0.13 -0.37 8.06 -52.49 -0.42 -0.80 16 45 H 0.13 -0.34 8.06 -52.49 -0.42 -0.76 16 46 H 0.14 -0.22 5.13 -52.48 -0.27 -0.49 16 LS Contribution 381.54 15.07 5.75 5.75 Total: 0.00 -8.77 381.54 -12.52 -21.30 By element: Atomic # 1 Polarization: -6.46 SS G_CDS: -6.23 Total: -12.69 kcal Atomic # 6 Polarization: 0.78 SS G_CDS: -5.61 Total: -4.84 kcal Atomic # 7 Polarization: 1.59 SS G_CDS: -0.28 Total: 1.30 kcal Atomic # 8 Polarization: -5.80 SS G_CDS: -1.01 Total: -6.81 kcal Atomic # 14 Polarization: 1.12 SS G_CDS: -5.13 Total: -4.01 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -8.77 -12.52 -21.30 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.464 kcal (2) G-P(sol) polarization free energy of solvation -8.773 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.238 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.524 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.297 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.762 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds