Wall clock time and date at job start Sun Mar 7 2021 08:57:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86297 * 109.47241 * 2 1 4 4 C 1.50705 * 109.47388 * 120.00139 * 2 1 3 5 5 C 1.38709 * 120.02672 * 75.01909 * 4 2 1 6 6 O 1.35895 * 120.05826 * 359.96119 * 5 4 2 7 7 C 1.42904 * 117.00128 * 180.02562 * 6 5 4 8 8 C 1.50703 * 109.47031 * 179.97438 * 7 6 5 9 9 O 1.21278 * 120.00089 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99605 * 180.02562 * 8 7 6 11 11 C 1.46501 * 119.99557 * 180.02562 * 10 8 7 12 12 H 1.08998 * 112.85470 * 25.33033 * 11 10 8 13 13 C 1.53784 * 113.61539 * 156.53125 * 11 10 8 14 14 C 1.53771 * 87.08551 * 139.97650 * 13 11 10 15 15 H 1.09002 * 113.61616 * 89.19944 * 14 13 11 16 16 C 1.50697 * 113.61593 * 220.01873 * 14 13 11 17 17 C 1.38239 * 120.00259 * 59.72555 * 16 14 13 18 18 C 1.38228 * 120.00156 * 179.81062 * 17 16 14 19 19 C 1.38239 * 119.99871 * 0.39997 * 18 17 16 20 20 C 1.38234 * 120.00328 * 359.85095 * 19 18 17 21 21 C 1.38231 * 119.99632 * 359.96112 * 20 19 18 22 22 C 1.53782 * 113.61273 * 254.13343 * 11 10 8 23 23 C 1.38759 * 119.88803 * 179.97438 * 5 4 2 24 24 C 1.38126 * 119.94113 * 359.97438 * 23 5 4 25 25 C 1.38290 * 120.05768 * 359.97438 * 24 23 5 26 26 C 1.38164 * 120.02639 * 255.00220 * 4 2 1 27 27 H 0.96706 * 113.99833 * 180.02562 * 1 2 3 28 28 H 1.09006 * 109.47457 * 240.00019 * 2 1 3 29 29 H 1.48501 * 110.00211 * 179.97438 * 3 2 1 30 30 H 1.48502 * 109.99981 * 301.31937 * 3 2 1 31 31 H 1.09000 * 109.46735 * 300.00020 * 7 6 5 32 32 H 1.09002 * 109.46782 * 59.99820 * 7 6 5 33 33 H 0.97002 * 120.00324 * 359.97438 * 10 8 7 34 34 H 1.09004 * 113.61005 * 254.53257 * 13 11 10 35 35 H 1.09000 * 113.61377 * 25.42116 * 13 11 10 36 36 H 1.07998 * 119.99725 * 0.02562 * 17 16 14 37 37 H 1.07995 * 120.00415 * 180.22670 * 18 17 16 38 38 H 1.08001 * 119.99850 * 179.83506 * 19 18 17 39 39 H 1.07995 * 120.00159 * 179.97438 * 20 19 18 40 40 H 1.08006 * 120.00133 * 179.97438 * 21 20 19 41 41 H 1.09002 * 113.61368 * 334.56736 * 22 11 10 42 42 H 1.08999 * 113.61852 * 105.47265 * 22 11 10 43 43 H 1.07998 * 120.02723 * 180.02562 * 23 5 4 44 44 H 1.07995 * 119.97120 * 179.97438 * 24 23 5 45 45 H 1.07995 * 119.94278 * 180.27458 * 25 24 23 46 46 H 1.08005 * 119.97654 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.8701 -2.0941 1.3067 6 8 1.3563 -2.8107 0.2727 7 6 1.3241 -4.2317 0.4208 8 6 0.7257 -4.8521 -0.8154 9 8 0.3621 -4.1469 -1.7326 10 7 0.5936 -6.1906 -0.9010 11 6 0.0124 -6.7938 -2.1030 12 1 0.1306 -6.1702 -2.9891 13 6 0.4287 -8.2582 -2.3203 14 6 -1.0202 -8.5224 -2.7623 15 1 -1.1854 -8.3731 -3.8293 16 6 -1.5749 -9.8312 -2.2618 17 6 -1.6518 -10.0751 -0.9033 18 6 -2.1642 -11.2740 -0.4442 19 6 -2.5921 -12.2324 -1.3438 20 6 -2.5104 -11.9907 -2.7024 21 6 -2.0016 -10.7902 -3.1614 22 6 -1.4216 -7.3113 -1.9007 23 6 2.3340 -2.7453 2.4408 24 6 2.8559 -2.0146 3.4904 25 6 2.9169 -0.6353 3.4114 26 6 2.4537 0.0159 2.2833 27 1 -0.3933 -0.8835 0.0004 28 1 1.7923 -0.5138 -0.8900 29 1 3.5349 1.7701 0.0006 30 1 1.5354 2.4771 -1.1921 31 1 2.3384 -4.6054 0.5608 32 1 0.7177 -4.4929 1.2880 33 1 0.8840 -6.7547 -0.1672 34 1 1.1597 -8.3905 -3.1180 35 1 0.7059 -8.7743 -1.4011 36 1 -1.3148 -9.3274 -0.2006 37 1 -2.2277 -11.4631 0.6171 38 1 -2.9900 -13.1702 -0.9852 39 1 -2.8443 -12.7397 -3.4052 40 1 -1.9373 -10.6015 -4.2229 41 1 -1.6512 -7.5681 -0.8665 42 1 -2.1824 -6.6803 -2.3602 43 1 2.2877 -3.8225 2.5024 44 1 3.2167 -2.5209 4.3734 45 1 3.3294 -0.0662 4.2313 46 1 2.5023 1.0932 2.2242 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16147626_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:38 Heat of formation + Delta-G solvation = -20.237998 kcal Electronic energy + Delta-G solvation = -28066.393227 eV Core-core repulsion = 24081.736457 eV Total energy + Delta-G solvation = -3984.656770 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.151 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -41.78687 -41.29800 -40.30032 -38.89595 -38.28578 -37.49137 -34.89592 -32.74817 -31.96647 -31.73894 -31.18234 -29.45363 -26.75074 -26.67017 -25.91802 -23.77432 -23.53623 -22.62165 -22.40071 -21.68039 -20.37938 -19.45946 -18.38356 -18.34783 -18.04826 -17.53152 -17.28688 -16.78457 -16.68273 -16.44170 -15.89627 -15.78188 -15.54031 -15.38430 -15.28831 -15.14558 -14.70667 -14.34205 -14.24103 -14.16336 -13.98441 -13.82074 -13.49029 -13.46657 -13.13505 -12.73690 -12.60946 -12.53540 -12.32653 -12.20642 -12.08126 -11.84731 -11.69264 -11.49918 -11.29888 -11.17893 -10.97308 -10.19068 -9.95084 -9.82302 -9.56186 -9.25241 -4.95642 0.23554 0.38685 0.42174 0.49665 1.34268 1.37292 1.43660 1.57319 1.93613 2.54908 2.69885 2.82798 3.39733 3.47710 3.59736 3.64022 3.70008 3.81277 3.89146 3.91039 3.96248 4.02829 4.04653 4.09517 4.12989 4.16835 4.21869 4.28809 4.32310 4.49896 4.52483 4.61098 4.63935 4.67009 4.70416 4.80363 4.93234 4.94887 4.98175 5.07517 5.15025 5.18723 5.24752 5.39080 5.46394 5.52725 5.58170 5.64171 5.71757 5.73712 6.11921 6.22242 6.41590 6.48775 7.07182 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.088 4.088 3 Si 0.823 3.177 4 C -0.166 4.166 5 C 0.118 3.882 6 O -0.320 6.320 7 C 0.038 3.962 8 C 0.513 3.487 9 O -0.572 6.572 10 N -0.698 5.698 11 C 0.121 3.879 12 H 0.094 0.906 13 C -0.120 4.120 14 C -0.069 4.069 15 H 0.102 0.898 16 C -0.077 4.077 17 C -0.124 4.124 18 C -0.128 4.128 19 C -0.138 4.138 20 C -0.131 4.131 21 C -0.132 4.132 22 C -0.141 4.141 23 C -0.208 4.208 24 C -0.078 4.078 25 C -0.152 4.152 26 C -0.082 4.082 27 H 0.369 0.631 28 H 0.051 0.949 29 H -0.261 1.261 30 H -0.302 1.302 31 H 0.122 0.878 32 H 0.126 0.874 33 H 0.421 0.579 34 H 0.082 0.918 35 H 0.105 0.895 36 H 0.138 0.862 37 H 0.137 0.863 38 H 0.132 0.868 39 H 0.131 0.869 40 H 0.129 0.871 41 H 0.100 0.900 42 H 0.062 0.938 43 H 0.157 0.843 44 H 0.155 0.845 45 H 0.154 0.846 46 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.746 -5.831 7.438 9.842 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.194 4.194 3 Si 0.724 3.276 4 C -0.167 4.167 5 C 0.073 3.927 6 O -0.233 6.233 7 C -0.040 4.040 8 C 0.299 3.701 9 O -0.450 6.450 10 N -0.352 5.352 11 C 0.016 3.984 12 H 0.112 0.888 13 C -0.158 4.158 14 C -0.088 4.088 15 H 0.120 0.880 16 C -0.077 4.077 17 C -0.141 4.141 18 C -0.146 4.146 19 C -0.156 4.156 20 C -0.149 4.149 21 C -0.150 4.150 22 C -0.180 4.180 23 C -0.226 4.226 24 C -0.096 4.096 25 C -0.170 4.170 26 C -0.099 4.099 27 H 0.217 0.783 28 H 0.069 0.931 29 H -0.187 1.187 30 H -0.230 1.230 31 H 0.139 0.861 32 H 0.143 0.857 33 H 0.259 0.741 34 H 0.101 0.899 35 H 0.124 0.876 36 H 0.156 0.844 37 H 0.155 0.845 38 H 0.150 0.850 39 H 0.149 0.851 40 H 0.147 0.853 41 H 0.119 0.881 42 H 0.081 0.919 43 H 0.174 0.826 44 H 0.173 0.827 45 H 0.172 0.828 46 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 2.973 -4.050 6.182 7.966 hybrid contribution -0.203 -2.183 -0.845 2.350 sum 2.770 -6.233 5.336 8.660 Atomic orbital electron populations 1.86642 1.17773 1.33756 1.97238 1.25634 0.84394 1.14289 0.95109 0.92314 0.76489 0.73382 0.85380 1.19793 1.06623 0.91401 0.98906 1.19039 0.95299 0.90786 0.87616 1.86070 1.78250 1.19104 1.39915 1.22725 1.04564 0.79467 0.97208 1.20569 0.78114 0.83182 0.88190 1.90767 1.50404 1.62514 1.41357 1.45679 1.63196 1.05499 1.20781 1.22487 0.93880 0.93645 0.88399 0.88777 1.23391 0.96007 0.93110 1.03324 1.21326 0.96239 0.90971 1.00247 0.88011 1.19783 0.98880 0.95342 0.93711 1.21219 1.00090 0.97661 0.95157 1.21447 0.98578 0.93938 1.00628 1.21461 1.00330 1.00195 0.93613 1.21420 0.99542 0.97622 0.96319 1.21318 0.99426 0.94000 1.00216 1.23631 0.96679 0.96213 1.01434 1.21587 1.05293 1.01864 0.93895 1.21430 0.95614 0.94201 0.98333 1.21472 1.01624 0.95189 0.98674 1.21116 0.96282 1.00185 0.92298 0.78291 0.93139 1.18657 1.22989 0.86053 0.85679 0.74053 0.89946 0.87620 0.84400 0.84530 0.85009 0.85083 0.85340 0.88134 0.91915 0.82555 0.82708 0.82789 0.82973 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -5.85 12.65 -148.98 -1.89 -7.73 16 2 C -0.09 -0.74 2.33 71.24 0.17 -0.57 16 3 Si 0.82 3.51 30.17 68.60 2.07 5.58 16 4 C -0.17 -0.90 5.28 -19.77 -0.10 -1.00 16 5 C 0.12 0.45 6.62 22.51 0.15 0.60 16 6 O -0.32 -1.78 8.57 -73.33 -0.63 -2.41 16 7 C 0.04 -0.13 5.22 71.24 0.37 0.24 16 8 C 0.51 1.18 7.91 87.66 0.69 1.87 16 9 O -0.57 -8.06 16.12 16.01 0.26 -7.80 16 10 N -0.70 3.35 5.36 -440.04 -2.36 0.99 16 11 C 0.12 -0.27 4.21 45.52 0.19 -0.08 16 12 H 0.09 0.30 7.50 -2.39 -0.02 0.28 16 13 C -0.12 0.69 7.29 31.12 0.23 0.92 16 14 C -0.07 0.21 3.98 -10.96 -0.04 0.17 16 15 H 0.10 -0.30 8.09 -2.39 -0.02 -0.32 16 16 C -0.08 0.06 5.29 -19.86 -0.11 -0.05 16 17 C -0.12 0.25 8.60 22.27 0.19 0.44 16 18 C -0.13 0.14 10.05 22.27 0.22 0.37 16 19 C -0.14 -0.01 10.05 22.27 0.22 0.21 16 20 C -0.13 -0.09 10.05 22.27 0.22 0.13 16 21 C -0.13 -0.08 9.71 22.27 0.22 0.13 16 22 C -0.14 0.35 7.27 31.18 0.23 0.57 16 23 C -0.21 0.46 9.04 22.37 0.20 0.67 16 24 C -0.08 0.29 10.04 22.26 0.22 0.51 16 25 C -0.15 0.39 10.04 22.28 0.22 0.61 16 26 C -0.08 -0.06 8.66 22.25 0.19 0.13 16 27 H 0.37 3.23 8.61 -74.05 -0.64 2.59 16 28 H 0.05 0.61 7.83 -2.38 -0.02 0.59 16 29 H -0.26 -1.44 7.11 99.48 0.71 -0.73 16 30 H -0.30 -3.50 7.11 99.48 0.71 -2.79 16 31 H 0.12 -1.11 7.66 -2.39 -0.02 -1.13 16 32 H 0.13 -1.22 7.66 -2.39 -0.02 -1.24 16 33 H 0.42 -5.26 8.71 -92.71 -0.81 -6.07 16 34 H 0.08 -0.45 8.14 -2.38 -0.02 -0.47 16 35 H 0.11 -0.90 7.68 -2.39 -0.02 -0.92 16 36 H 0.14 -0.90 6.68 -2.91 -0.02 -0.92 16 37 H 0.14 -0.67 8.06 -2.91 -0.02 -0.69 16 38 H 0.13 -0.39 8.06 -2.91 -0.02 -0.41 16 39 H 0.13 -0.29 8.06 -2.91 -0.02 -0.31 16 40 H 0.13 -0.23 8.06 -2.91 -0.02 -0.25 16 41 H 0.10 -0.47 6.34 -2.39 -0.02 -0.48 16 42 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 43 H 0.16 -1.38 6.30 -2.91 -0.02 -1.40 16 44 H 0.16 -1.42 8.06 -2.91 -0.02 -1.45 16 45 H 0.15 -1.18 8.06 -2.91 -0.02 -1.20 16 46 H 0.15 -0.57 5.13 -2.91 -0.01 -0.59 16 Total: 0.00 -24.14 381.54 0.76 -23.38 By element: Atomic # 1 Polarization: -17.49 SS G_CDS: -0.39 Total: -17.88 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: 3.69 Total: 5.87 kcal Atomic # 7 Polarization: 3.35 SS G_CDS: -2.36 Total: 0.99 kcal Atomic # 8 Polarization: -15.69 SS G_CDS: -2.26 Total: -17.94 kcal Atomic # 14 Polarization: 3.51 SS G_CDS: 2.07 Total: 5.58 kcal Total: -24.14 0.76 -23.38 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.141 kcal (2) G-P(sol) polarization free energy of solvation -24.138 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.997 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.759 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.379 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.238 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds