Wall clock time and date at job start Sun Mar 7 2021 08:57:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47256 * 2 1 4 4 C 1.50699 * 109.46964 * 239.99985 * 2 1 3 5 5 C 1.38267 * 119.94219 * 119.72516 * 4 2 1 6 6 C 1.38146 * 120.05554 * 179.72698 * 5 4 2 7 7 C 1.38733 * 119.94011 * 0.54742 * 6 5 4 8 8 O 1.35899 * 120.05436 * 179.75096 * 7 6 5 9 9 C 1.42894 * 117.00420 * 359.97438 * 8 7 6 10 10 C 1.50698 * 109.47718 * 180.02562 * 9 8 7 11 11 O 1.21276 * 119.99662 * 0.02562 * 10 9 8 12 12 N 1.34770 * 120.00182 * 179.97438 * 10 9 8 13 13 C 1.46507 * 120.00343 * 180.02562 * 12 10 9 14 14 H 1.09001 * 112.84319 * 336.19747 * 13 12 10 15 15 C 1.53775 * 113.61360 * 107.50146 * 13 12 10 16 16 C 1.53784 * 87.08162 * 139.98638 * 15 13 12 17 17 H 1.08994 * 113.69028 * 89.12417 * 16 15 13 18 18 C 1.50694 * 113.61385 * 220.01789 * 16 15 13 19 19 C 1.38234 * 120.00113 * 37.22679 * 18 16 15 20 20 C 1.38241 * 120.00030 * 179.80897 * 19 18 16 21 21 C 1.38229 * 120.00053 * 0.39529 * 20 19 18 22 22 C 1.38235 * 120.00111 * 359.85333 * 21 20 19 23 23 C 1.38239 * 119.99979 * 359.96294 * 22 21 20 24 24 C 1.53779 * 113.61664 * 205.00252 * 13 12 10 25 25 C 1.38731 * 119.88948 * 359.72638 * 7 6 5 26 26 C 1.38139 * 119.94606 * 0.02562 * 25 7 6 27 27 H 0.96708 * 113.99549 * 300.00274 * 1 2 3 28 28 H 1.09002 * 109.47259 * 120.00198 * 2 1 3 29 29 H 1.48501 * 110.00188 * 178.68319 * 3 2 1 30 30 H 1.48498 * 110.00005 * 300.00280 * 3 2 1 31 31 H 1.07995 * 119.97264 * 359.97438 * 5 4 2 32 32 H 1.07994 * 120.03112 * 180.27943 * 6 5 4 33 33 H 1.09002 * 109.47059 * 300.00441 * 9 8 7 34 34 H 1.09005 * 109.47012 * 59.99619 * 9 8 7 35 35 H 0.97004 * 120.00148 * 0.02562 * 12 10 9 36 36 H 1.09004 * 113.61750 * 254.52989 * 15 13 12 37 37 H 1.09001 * 113.62075 * 25.43517 * 15 13 12 38 38 H 1.07997 * 120.00188 * 359.97438 * 19 18 16 39 39 H 1.08004 * 119.99699 * 180.22287 * 20 19 18 40 40 H 1.08001 * 120.00305 * 179.83788 * 21 20 19 41 41 H 1.08001 * 120.00648 * 179.97438 * 22 21 20 42 42 H 1.07998 * 120.00079 * 180.02562 * 23 22 21 43 43 H 1.08999 * 113.61553 * 334.56707 * 24 13 12 44 44 H 1.08994 * 113.61064 * 105.38583 * 24 13 12 45 45 H 1.08007 * 120.02679 * 179.97438 * 25 7 6 46 46 H 1.07999 * 119.97308 * 179.97438 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7214 -0.0357 -2.1427 6 6 3.1878 -0.6862 -3.2686 7 6 2.8533 -2.0144 -3.4893 8 8 3.3067 -2.6552 -4.5987 9 6 4.1230 -1.9001 -5.4960 10 6 4.5279 -2.7688 -6.6589 11 8 4.1537 -3.9211 -6.7141 12 7 5.3049 -2.2650 -7.6381 13 6 5.6980 -3.1094 -8.7689 14 1 5.6733 -4.1730 -8.5316 15 6 4.9822 -2.7525 -10.0823 16 6 6.3261 -2.9957 -10.7892 17 1 6.4737 -4.0280 -11.1062 18 6 6.6228 -2.0002 -11.8809 19 6 6.2624 -0.6748 -11.7244 20 6 6.5381 0.2392 -12.7242 21 6 7.1669 -0.1737 -13.8839 22 6 7.5227 -1.5000 -14.0426 23 6 7.2504 -2.4133 -13.0412 24 6 7.0020 -2.6602 -9.4492 25 6 2.0557 -2.6875 -2.5753 26 6 1.5961 -2.0340 -1.4484 27 1 -0.3933 0.4418 0.7651 28 1 1.7923 -0.5139 0.8900 29 1 3.5346 1.7703 0.0321 30 1 1.5615 2.4679 -1.2084 31 1 2.9775 0.9997 -1.9729 32 1 3.8086 -0.1601 -3.9786 33 1 3.5612 -1.0411 -5.8629 34 1 5.0145 -1.5543 -4.9726 35 1 5.6038 -1.3432 -7.5942 36 1 4.2059 -3.4640 -10.3638 37 1 4.6455 -1.7168 -10.1287 38 1 5.7678 -0.3529 -10.8199 39 1 6.2596 1.2753 -12.6003 40 1 7.3799 0.5398 -14.6661 41 1 8.0136 -1.8228 -14.9488 42 1 7.5288 -3.4494 -13.1650 43 1 7.2176 -1.5993 -9.3224 44 1 7.8564 -3.2963 -9.2183 45 1 1.7936 -3.7215 -2.7451 46 1 0.9748 -2.5574 -0.7368 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:42 Heat of formation + Delta-G solvation = -17.887755 kcal Electronic energy + Delta-G solvation = -27365.927880 eV Core-core repulsion = 23381.373024 eV Total energy + Delta-G solvation = -3984.554856 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.151 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -41.73395 -41.26243 -40.27392 -39.11924 -38.50768 -37.19096 -34.84819 -32.52911 -31.97833 -31.84950 -31.71827 -29.68684 -26.85387 -26.36000 -25.80787 -24.10057 -23.65270 -22.71681 -22.11083 -21.65999 -20.46434 -19.54812 -18.48925 -18.34130 -18.09513 -17.49838 -17.31346 -16.84106 -16.71953 -16.49967 -15.96229 -15.70829 -15.65822 -15.50616 -15.26130 -15.03193 -14.51640 -14.38511 -14.27546 -14.11135 -14.01335 -13.83366 -13.62714 -13.61774 -13.41786 -13.14938 -12.65267 -12.47661 -12.40383 -12.17389 -11.99947 -11.90398 -11.84512 -11.76489 -11.54571 -10.88435 -10.34043 -10.19016 -10.06288 -9.86843 -9.61156 -9.21588 -5.00522 0.25547 0.28142 0.37644 0.45123 1.25998 1.41396 1.43681 1.59891 1.93227 2.51864 2.61398 2.77744 3.30368 3.36712 3.44116 3.55166 3.60614 3.65387 3.76395 3.79705 3.80604 3.86891 3.92848 3.94592 4.04672 4.07933 4.19058 4.21449 4.36042 4.43968 4.46386 4.52517 4.55012 4.60636 4.63101 4.69356 4.83782 4.90403 4.90728 5.00523 5.07479 5.12075 5.13229 5.21161 5.39263 5.48634 5.52559 5.59163 5.64857 5.66867 6.04906 6.19487 6.33866 6.61423 7.05016 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.067 4.067 3 Si 0.682 3.318 4 C -0.112 4.112 5 C -0.083 4.083 6 C -0.205 4.205 7 C 0.134 3.866 8 O -0.287 6.287 9 C 0.039 3.961 10 C 0.517 3.483 11 O -0.511 6.511 12 N -0.718 5.718 13 C 0.124 3.876 14 H 0.120 0.880 15 C -0.145 4.145 16 C -0.071 4.071 17 H 0.104 0.896 18 C -0.070 4.070 19 C -0.118 4.118 20 C -0.118 4.118 21 C -0.124 4.124 22 C -0.117 4.117 23 C -0.115 4.115 24 C -0.135 4.135 25 C -0.143 4.143 26 C -0.047 4.047 27 H 0.382 0.618 28 H 0.074 0.926 29 H -0.256 1.256 30 H -0.252 1.252 31 H 0.120 0.880 32 H 0.131 0.869 33 H 0.095 0.905 34 H 0.095 0.905 35 H 0.402 0.598 36 H 0.078 0.922 37 H 0.090 0.910 38 H 0.120 0.880 39 H 0.122 0.878 40 H 0.122 0.878 41 H 0.123 0.877 42 H 0.122 0.878 43 H 0.090 0.910 44 H 0.080 0.920 45 H 0.138 0.862 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.261 5.085 1.671 5.810 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.177 4.177 3 Si 0.583 3.417 4 C -0.113 4.113 5 C -0.100 4.100 6 C -0.223 4.223 7 C 0.088 3.912 8 O -0.199 6.199 9 C -0.040 4.040 10 C 0.302 3.698 11 O -0.384 6.384 12 N -0.371 5.371 13 C 0.019 3.981 14 H 0.138 0.862 15 C -0.184 4.184 16 C -0.089 4.089 17 H 0.122 0.878 18 C -0.070 4.070 19 C -0.136 4.136 20 C -0.136 4.136 21 C -0.142 4.142 22 C -0.135 4.135 23 C -0.133 4.133 24 C -0.173 4.173 25 C -0.162 4.162 26 C -0.065 4.065 27 H 0.230 0.770 28 H 0.092 0.908 29 H -0.181 1.181 30 H -0.176 1.176 31 H 0.138 0.862 32 H 0.149 0.851 33 H 0.112 0.888 34 H 0.113 0.887 35 H 0.237 0.763 36 H 0.096 0.904 37 H 0.108 0.892 38 H 0.138 0.862 39 H 0.140 0.860 40 H 0.140 0.860 41 H 0.141 0.859 42 H 0.140 0.860 43 H 0.108 0.892 44 H 0.099 0.901 45 H 0.156 0.844 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 2.520 4.301 0.606 5.022 hybrid contribution 0.377 0.280 -0.325 0.572 sum 2.897 4.582 0.280 5.428 Atomic orbital electron populations 1.86498 1.17297 1.81790 1.49670 1.24609 0.85638 1.10113 0.97385 0.95326 0.80572 0.78256 0.87502 1.19273 1.00735 0.94824 0.96448 1.20635 0.97323 0.98518 0.93548 1.21104 1.06294 0.94335 1.00593 1.19043 0.94387 0.90939 0.86787 1.86172 1.64284 1.38502 1.30932 1.22495 0.96388 0.94623 0.90530 1.20048 0.78757 0.88060 0.82940 1.90784 1.52844 1.17612 1.77197 1.45816 1.52576 1.15791 1.22885 1.22599 0.95010 0.96853 0.83596 0.86248 1.23629 0.96885 1.03034 0.94833 1.21323 0.96810 0.98731 0.92069 0.87813 1.19624 0.98411 0.94012 0.94974 1.20979 1.00529 0.92858 0.99252 1.21169 0.98869 0.99593 0.93963 1.21206 0.98962 0.96172 0.97832 1.21203 0.99773 0.93499 0.99035 1.21095 0.99051 0.99790 0.93400 1.23459 0.97006 1.02592 0.94249 1.20548 1.00234 1.01349 0.94053 1.20844 0.96350 0.93337 0.95982 0.77048 0.90789 1.18084 1.17627 0.86217 0.85102 0.88763 0.88734 0.76302 0.90373 0.89165 0.86229 0.86042 0.86044 0.85947 0.85989 0.89194 0.90105 0.84367 0.84515 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.17 12.74 -35.23 -0.45 -0.61 16 2 C -0.07 0.00 2.81 36.01 0.10 0.10 16 3 Si 0.68 -0.76 29.78 -169.99 -5.06 -5.82 16 4 C -0.11 -0.28 5.42 -104.60 -0.57 -0.85 16 5 C -0.08 -0.19 8.66 -39.60 -0.34 -0.54 16 6 C -0.20 -0.34 9.04 -39.43 -0.36 -0.70 16 7 C 0.13 0.41 6.69 -39.22 -0.26 0.15 16 8 O -0.29 -1.06 9.67 -39.33 -0.38 -1.44 16 9 C 0.04 -0.01 5.22 36.00 0.19 0.18 16 10 C 0.52 0.89 7.91 -10.99 -0.09 0.81 16 11 O -0.51 -3.42 16.10 -14.35 -0.23 -3.65 16 12 N -0.72 1.09 5.35 -53.02 -0.28 0.81 16 13 C 0.12 -0.12 4.24 -67.12 -0.28 -0.40 16 14 H 0.12 0.10 7.46 -51.93 -0.39 -0.29 16 15 C -0.15 0.16 7.25 -25.92 -0.19 -0.03 16 16 C -0.07 0.10 3.98 -90.96 -0.36 -0.26 16 17 H 0.10 -0.18 8.09 -51.93 -0.42 -0.60 16 18 C -0.07 0.00 5.29 -104.63 -0.55 -0.55 16 19 C -0.12 0.03 8.63 -39.58 -0.34 -0.31 16 20 C -0.12 -0.01 10.05 -39.58 -0.40 -0.40 16 21 C -0.12 -0.04 10.05 -39.59 -0.40 -0.44 16 22 C -0.12 -0.04 10.05 -39.58 -0.40 -0.44 16 23 C -0.12 -0.03 9.71 -39.58 -0.38 -0.42 16 24 C -0.13 0.30 7.30 -25.92 -0.19 0.11 16 25 C -0.14 -0.42 9.99 -39.44 -0.39 -0.82 16 26 C -0.05 -0.11 9.60 -39.61 -0.38 -0.49 16 27 H 0.38 -1.82 8.74 45.56 0.40 -1.42 16 28 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 29 H -0.26 -0.30 7.11 56.52 0.40 0.11 16 30 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 31 H 0.12 0.17 4.87 -52.49 -0.26 -0.08 16 32 H 0.13 -0.16 6.30 -52.49 -0.33 -0.49 16 33 H 0.09 -0.25 7.66 -51.93 -0.40 -0.64 16 34 H 0.09 -0.26 7.66 -51.93 -0.40 -0.66 16 35 H 0.40 -1.88 8.73 -40.82 -0.36 -2.23 16 36 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 37 H 0.09 -0.14 6.30 -51.93 -0.33 -0.47 16 38 H 0.12 -0.24 6.64 -52.49 -0.35 -0.58 16 39 H 0.12 -0.19 8.06 -52.48 -0.42 -0.61 16 40 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 41 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 42 H 0.12 -0.14 8.05 -52.49 -0.42 -0.56 16 43 H 0.09 -0.26 7.71 -51.93 -0.40 -0.66 16 44 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 45 H 0.14 0.28 8.06 -52.48 -0.42 -0.14 16 46 H 0.14 0.12 8.06 -52.49 -0.42 -0.30 16 LS Contribution 382.50 15.07 5.76 5.76 Total: 0.00 -10.24 382.50 -12.46 -22.70 By element: Atomic # 1 Polarization: -6.24 SS G_CDS: -6.22 Total: -12.46 kcal Atomic # 6 Polarization: 0.30 SS G_CDS: -5.60 Total: -5.30 kcal Atomic # 7 Polarization: 1.09 SS G_CDS: -0.28 Total: 0.81 kcal Atomic # 8 Polarization: -4.64 SS G_CDS: -1.06 Total: -5.70 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: -5.06 Total: -5.82 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -10.24 -12.46 -22.70 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.813 kcal (2) G-P(sol) polarization free energy of solvation -10.244 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.431 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.457 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.701 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.888 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds