Wall clock time and date at job start Sun Mar 7 2021 08:57:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86300 * 109.47241 * 2 1 4 4 C 1.50700 * 109.47341 * 240.00126 * 2 1 3 5 5 C 1.38264 * 119.94555 * 119.72100 * 4 2 1 6 6 C 1.38143 * 120.05501 * 179.73030 * 5 4 2 7 7 C 1.38739 * 119.94235 * 0.56929 * 6 5 4 8 8 O 1.35899 * 120.05323 * 179.68955 * 7 6 5 9 9 C 1.42900 * 117.00511 * 0.02562 * 8 7 6 10 10 C 1.52994 * 109.47389 * 180.02562 * 9 8 7 11 11 C 1.50701 * 109.47158 * 180.02562 * 10 9 8 12 12 O 1.21281 * 119.99616 * 0.02562 * 11 10 9 13 13 N 1.34772 * 120.00298 * 180.02562 * 11 10 9 14 14 C 1.46501 * 120.00326 * 180.02562 * 13 11 10 15 15 H 1.09005 * 112.84489 * 25.33305 * 14 13 11 16 16 C 1.53786 * 113.61263 * 156.52743 * 14 13 11 17 17 C 1.53783 * 87.07726 * 139.98349 * 16 14 13 18 18 H 1.09001 * 113.61258 * 89.20211 * 17 16 14 19 19 C 1.50702 * 113.61201 * 220.01831 * 17 16 14 20 20 C 1.38230 * 119.99822 * 59.72601 * 19 17 16 21 21 C 1.38245 * 119.99809 * 179.76739 * 20 19 17 22 22 C 1.38233 * 119.99627 * 0.50767 * 21 20 19 23 23 C 1.38231 * 120.00242 * 359.74579 * 22 21 20 24 24 C 1.38233 * 119.99751 * 240.00109 * 19 17 16 25 25 C 1.53772 * 113.61660 * 254.13455 * 14 13 11 26 26 C 1.38726 * 119.88956 * 359.70523 * 7 6 5 27 27 C 1.38153 * 119.94564 * 0.02562 * 26 7 6 28 28 H 0.96693 * 114.00306 * 59.99646 * 1 2 3 29 29 H 1.09000 * 109.47349 * 120.00016 * 2 1 3 30 30 H 1.48506 * 110.00048 * 298.68597 * 3 2 1 31 31 H 1.48502 * 109.99996 * 59.99922 * 3 2 1 32 32 H 1.08002 * 119.97450 * 359.97438 * 5 4 2 33 33 H 1.07999 * 120.02707 * 180.25811 * 6 5 4 34 34 H 1.09007 * 109.47130 * 300.00980 * 9 8 7 35 35 H 1.09003 * 109.46727 * 59.99954 * 9 8 7 36 36 H 1.08996 * 109.47071 * 300.00340 * 10 9 8 37 37 H 1.09001 * 109.46830 * 60.00503 * 10 9 8 38 38 H 0.96999 * 119.99728 * 359.97438 * 13 11 10 39 39 H 1.09000 * 113.61292 * 254.52676 * 16 14 13 40 40 H 1.08999 * 113.61591 * 25.43273 * 16 14 13 41 41 H 1.07997 * 120.00311 * 0.02562 * 20 19 17 42 42 H 1.07992 * 120.00006 * 180.22974 * 21 20 19 43 43 H 1.08000 * 120.00066 * 179.72688 * 22 21 20 44 44 H 1.08008 * 120.00271 * 179.97438 * 23 22 21 45 45 H 1.07999 * 120.00378 * 0.02562 * 24 19 17 46 46 H 1.09004 * 113.61706 * 334.56776 * 25 14 13 47 47 H 1.09005 * 113.61727 * 105.46577 * 25 14 13 48 48 H 1.07999 * 120.03394 * 179.97438 * 26 7 6 49 49 H 1.07995 * 119.97802 * 179.97438 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7214 -0.0356 -2.1427 6 6 3.1878 -0.6862 -3.2686 7 6 2.8530 -2.0143 -3.4895 8 8 3.3053 -2.6547 -4.5996 9 6 4.1220 -1.8996 -5.4968 10 6 4.5317 -2.7812 -6.6782 11 6 5.3934 -1.9850 -7.6240 12 8 5.6545 -0.8266 -7.3771 13 7 5.8739 -2.5601 -8.7441 14 6 6.7121 -1.7862 -9.6633 15 1 7.2311 -0.9634 -9.1717 16 6 7.6277 -2.6552 -10.5417 17 6 7.3020 -1.6927 -11.6960 18 1 7.9830 -0.8442 -11.7623 19 6 7.0983 -2.3843 -13.0194 20 6 6.0998 -3.3301 -13.1584 21 6 5.9098 -3.9610 -14.3737 22 6 6.7250 -3.6537 -15.4469 23 6 7.7269 -2.7116 -15.3064 24 6 7.9135 -2.0769 -14.0926 25 6 5.9898 -1.3740 -10.9567 26 6 2.0554 -2.6875 -2.5756 27 6 1.5961 -2.0340 -1.4483 28 1 -0.3933 0.4417 -0.7649 29 1 1.7923 -0.5138 0.8900 30 1 1.5878 2.4586 -1.2242 31 1 1.5615 2.4679 1.2085 32 1 2.9775 0.9998 -1.9730 33 1 3.8083 -0.1599 -3.9788 34 1 3.5606 -1.0398 -5.8628 35 1 5.0139 -1.5550 -4.9735 36 1 5.0928 -3.6410 -6.3124 37 1 3.6395 -3.1253 -7.2013 38 1 5.6654 -3.4866 -8.9413 39 1 8.6740 -2.6333 -10.2371 40 1 7.2521 -3.6665 -10.6973 41 1 5.4655 -3.5731 -12.3188 42 1 5.1274 -4.6972 -14.4834 43 1 6.5795 -4.1497 -16.3951 44 1 8.3642 -2.4718 -16.1448 45 1 8.6967 -1.3415 -13.9826 46 1 5.1655 -2.0345 -11.2261 47 1 5.7156 -0.3195 -10.9867 48 1 1.7930 -3.7212 -2.7454 49 1 0.9749 -2.5574 -0.7367 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_4549602.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:57:45 Heat of formation + Delta-G solvation = -30.434217 kcal Electronic energy + Delta-G solvation = -28953.893807 eV Core-core repulsion = 24813.257276 eV Total energy + Delta-G solvation = -4140.636530 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -41.63542 -41.23061 -40.38400 -39.20675 -38.71088 -37.23053 -34.81709 -33.38264 -32.07622 -31.89322 -31.67754 -31.27562 -26.99565 -26.84828 -26.13636 -25.18497 -23.69994 -23.49556 -22.44855 -22.08753 -21.53954 -20.41445 -19.46614 -18.43160 -18.26598 -17.74960 -17.49886 -17.14901 -16.90312 -16.57799 -16.30978 -16.14088 -16.01332 -15.88107 -15.56645 -15.39900 -14.85928 -14.67662 -14.48396 -14.39445 -14.30715 -14.22261 -14.05324 -13.91857 -13.61874 -13.40459 -13.19569 -12.89353 -12.88499 -12.61297 -12.40530 -12.16262 -12.03252 -11.90716 -11.79416 -11.77089 -11.54342 -11.53904 -10.95580 -10.55011 -10.16337 -9.98442 -9.86505 -9.60810 -9.15657 -4.92713 0.34071 0.36376 0.37983 0.45417 1.33185 1.48254 1.62951 1.67909 1.99613 2.44932 2.71080 2.78068 3.32780 3.41784 3.47878 3.55524 3.61214 3.72283 3.78847 3.80921 3.85239 3.85710 3.94974 3.99008 4.05215 4.08613 4.19421 4.26011 4.31732 4.40156 4.46915 4.52909 4.56006 4.56687 4.58149 4.62020 4.63079 4.69789 4.76952 4.84951 4.89778 5.00341 5.01890 5.08249 5.13360 5.22796 5.33775 5.41830 5.52910 5.53962 5.59508 5.66942 5.75721 6.05238 6.31518 6.38774 6.44724 7.06444 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.069 4.069 3 Si 0.680 3.320 4 C -0.157 4.157 5 C -0.075 4.075 6 C -0.203 4.203 7 C 0.138 3.862 8 O -0.316 6.316 9 C 0.074 3.926 10 C -0.142 4.142 11 C 0.521 3.479 12 O -0.538 6.538 13 N -0.719 5.719 14 C 0.122 3.878 15 H 0.118 0.882 16 C -0.135 4.135 17 C -0.071 4.071 18 H 0.103 0.897 19 C -0.070 4.070 20 C -0.118 4.118 21 C -0.118 4.118 22 C -0.124 4.124 23 C -0.117 4.117 24 C -0.116 4.116 25 C -0.145 4.145 26 C -0.151 4.151 27 C -0.053 4.053 28 H 0.376 0.624 29 H 0.118 0.882 30 H -0.261 1.261 31 H -0.257 1.257 32 H 0.129 0.871 33 H 0.134 0.866 34 H 0.072 0.928 35 H 0.074 0.926 36 H 0.108 0.892 37 H 0.107 0.893 38 H 0.403 0.597 39 H 0.080 0.920 40 H 0.090 0.910 41 H 0.120 0.880 42 H 0.122 0.878 43 H 0.121 0.879 44 H 0.122 0.878 45 H 0.122 0.878 46 H 0.089 0.911 47 H 0.076 0.924 48 H 0.133 0.867 49 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.761 -2.937 -3.155 5.118 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.179 4.179 3 Si 0.582 3.418 4 C -0.158 4.158 5 C -0.093 4.093 6 C -0.221 4.221 7 C 0.092 3.908 8 O -0.230 6.230 9 C -0.002 4.002 10 C -0.182 4.182 11 C 0.308 3.692 12 O -0.414 6.414 13 N -0.370 5.370 14 C 0.017 3.983 15 H 0.136 0.864 16 C -0.173 4.173 17 C -0.090 4.090 18 H 0.121 0.879 19 C -0.070 4.070 20 C -0.136 4.136 21 C -0.136 4.136 22 C -0.142 4.142 23 C -0.135 4.135 24 C -0.134 4.134 25 C -0.183 4.183 26 C -0.169 4.169 27 C -0.071 4.071 28 H 0.223 0.777 29 H 0.135 0.865 30 H -0.186 1.186 31 H -0.182 1.182 32 H 0.146 0.854 33 H 0.152 0.848 34 H 0.091 0.909 35 H 0.092 0.908 36 H 0.126 0.874 37 H 0.125 0.875 38 H 0.238 0.762 39 H 0.098 0.902 40 H 0.108 0.892 41 H 0.138 0.862 42 H 0.140 0.860 43 H 0.139 0.861 44 H 0.140 0.860 45 H 0.140 0.860 46 H 0.108 0.892 47 H 0.095 0.905 48 H 0.151 0.849 49 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 2.803 -1.760 -2.476 4.133 hybrid contribution -1.047 -0.511 -0.911 1.479 sum 1.756 -2.270 -3.387 4.440 Atomic orbital electron populations 1.86587 1.17874 1.79934 1.49348 1.24932 0.83814 1.10703 0.98426 0.95063 0.91811 0.74736 0.80196 1.20181 1.02054 0.95520 0.97995 1.20806 0.96077 0.99221 0.93176 1.21269 1.05798 0.94356 1.00705 1.18995 0.94037 0.91013 0.86721 1.85975 1.65073 1.40487 1.31467 1.22429 0.94740 0.93833 0.89179 1.21482 1.01363 0.99948 0.95446 1.20327 0.79922 0.87456 0.81521 1.90751 1.58728 1.17246 1.74692 1.45954 1.52299 1.15849 1.22851 1.22571 0.92050 0.95619 0.88048 0.86449 1.23448 1.00620 0.98708 0.94542 1.21359 0.98607 0.98405 0.90601 0.87900 1.19626 0.95935 0.96806 0.94663 1.20979 0.98101 0.96860 0.97637 1.21172 0.99452 0.99812 0.93143 1.21206 0.95853 0.98140 0.98986 1.21202 0.98133 0.96630 0.97562 1.21092 0.99371 1.00126 0.92790 1.23643 0.96970 1.02875 0.94845 1.20503 1.00914 1.01068 0.94458 1.20832 0.96926 0.93449 0.95931 0.77686 0.86469 1.18596 1.18229 0.85350 0.84788 0.90926 0.90778 0.87412 0.87483 0.76189 0.90174 0.89188 0.86207 0.86029 0.86050 0.85964 0.86015 0.89214 0.90494 0.84878 0.84896 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.91 12.77 -35.23 -0.45 -1.36 16 2 C -0.07 -0.02 2.82 36.01 0.10 0.08 16 3 Si 0.68 -0.19 29.78 -169.99 -5.06 -5.25 16 4 C -0.16 -0.13 5.39 -104.60 -0.56 -0.70 16 5 C -0.08 -0.05 8.66 -39.61 -0.34 -0.39 16 6 C -0.20 -0.24 9.04 -39.43 -0.36 -0.59 16 7 C 0.14 0.25 6.69 -39.22 -0.26 -0.01 16 8 O -0.32 -0.45 10.14 -19.42 -0.20 -0.65 16 9 C 0.07 0.00 4.03 37.15 0.15 0.15 16 10 C -0.14 0.31 6.07 -27.89 -0.17 0.14 16 11 C 0.52 -0.07 7.83 -10.99 -0.09 -0.15 16 12 O -0.54 -2.08 15.60 5.56 0.09 -1.99 16 13 N -0.72 1.66 5.36 -53.02 -0.28 1.37 16 14 C 0.12 -0.19 4.21 -67.12 -0.28 -0.48 16 15 H 0.12 0.00 7.50 -51.93 -0.39 -0.39 16 16 C -0.14 0.35 7.30 -25.92 -0.19 0.16 16 17 C -0.07 0.12 3.98 -90.87 -0.36 -0.24 16 18 H 0.10 -0.21 8.09 -51.93 -0.42 -0.63 16 19 C -0.07 0.02 5.29 -104.63 -0.55 -0.53 16 20 C -0.12 0.05 8.60 -39.58 -0.34 -0.29 16 21 C -0.12 0.01 10.05 -39.58 -0.40 -0.38 16 22 C -0.12 -0.02 10.05 -39.59 -0.40 -0.41 16 23 C -0.12 -0.02 10.05 -39.58 -0.40 -0.42 16 24 C -0.12 -0.01 9.71 -39.58 -0.38 -0.39 16 25 C -0.14 0.22 7.27 -25.84 -0.19 0.03 16 26 C -0.15 -0.21 9.99 -39.43 -0.39 -0.60 16 27 C -0.05 -0.06 9.60 -39.60 -0.38 -0.44 16 28 H 0.38 -0.36 8.70 45.56 0.40 0.03 16 29 H 0.12 -0.05 7.96 -51.93 -0.41 -0.47 16 30 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 31 H -0.26 -0.76 7.11 56.52 0.40 -0.36 16 32 H 0.13 -0.13 4.87 -52.49 -0.26 -0.39 16 33 H 0.13 0.02 6.30 -52.49 -0.33 -0.31 16 34 H 0.07 0.03 7.62 -51.93 -0.40 -0.37 16 35 H 0.07 0.02 7.62 -51.93 -0.40 -0.38 16 36 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 37 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 38 H 0.40 -1.98 8.71 -40.82 -0.36 -2.34 16 39 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 40 H 0.09 -0.28 7.68 -51.93 -0.40 -0.68 16 41 H 0.12 -0.26 6.68 -52.49 -0.35 -0.61 16 42 H 0.12 -0.21 8.06 -52.49 -0.42 -0.63 16 43 H 0.12 -0.17 8.06 -52.49 -0.42 -0.59 16 44 H 0.12 -0.17 8.06 -52.48 -0.42 -0.59 16 45 H 0.12 -0.16 8.05 -52.49 -0.42 -0.59 16 46 H 0.09 -0.17 6.34 -51.93 -0.33 -0.49 16 47 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 48 H 0.13 0.02 8.06 -52.49 -0.42 -0.40 16 49 H 0.13 0.02 8.06 -52.49 -0.42 -0.40 16 LS Contribution 403.47 15.07 6.08 6.08 Total: 0.00 -7.93 403.47 -12.69 -20.62 By element: Atomic # 1 Polarization: -6.29 SS G_CDS: -7.06 Total: -13.35 kcal Atomic # 6 Polarization: 0.33 SS G_CDS: -5.80 Total: -5.47 kcal Atomic # 7 Polarization: 1.66 SS G_CDS: -0.28 Total: 1.37 kcal Atomic # 8 Polarization: -3.44 SS G_CDS: -0.56 Total: -4.00 kcal Atomic # 14 Polarization: -0.19 SS G_CDS: -5.06 Total: -5.25 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -7.93 -12.69 -20.62 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_4549602.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.814 kcal (2) G-P(sol) polarization free energy of solvation -7.932 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.746 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.688 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.620 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.434 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds