Wall clock time and date at job start Sun Mar 7 2021 08:58:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.46768 * 2 1 4 4 C 1.50698 * 109.47614 * 120.00348 * 2 1 3 5 5 C 1.38268 * 119.94371 * 244.73365 * 4 2 1 6 6 C 1.38144 * 120.05801 * 179.72280 * 5 4 2 7 7 C 1.38738 * 119.93868 * 0.56708 * 6 5 4 8 8 O 1.35897 * 120.05427 * 179.68795 * 7 6 5 9 9 C 1.42904 * 117.00004 * 0.02562 * 8 7 6 10 10 F 1.39896 * 109.47437 * 300.01114 * 9 8 7 11 11 F 1.39905 * 109.46446 * 60.00950 * 9 8 7 12 12 C 1.50700 * 109.47010 * 180.02562 * 9 8 7 13 13 O 1.21281 * 119.99871 * 0.02562 * 12 9 8 14 14 N 1.34773 * 119.99903 * 180.02562 * 12 9 8 15 15 C 1.46496 * 120.00153 * 180.02562 * 14 12 9 16 16 H 1.08997 * 112.85113 * 23.79547 * 15 14 12 17 17 C 1.53780 * 113.61871 * 154.99615 * 15 14 12 18 18 C 1.53780 * 87.08493 * 139.97875 * 17 15 14 19 19 H 1.09001 * 113.61384 * 89.11364 * 18 17 15 20 20 C 1.50703 * 113.61875 * 219.93821 * 18 17 15 21 21 C 1.38239 * 119.99842 * 59.72416 * 20 18 17 22 22 C 1.38229 * 119.99547 * 179.77052 * 21 20 18 23 23 C 1.38234 * 120.00242 * 0.48072 * 22 21 20 24 24 C 1.38237 * 119.99959 * 359.79493 * 23 22 21 25 25 C 1.38230 * 119.99756 * 239.99848 * 20 18 17 26 26 C 1.53780 * 87.07943 * 334.57022 * 18 17 15 27 27 C 1.38732 * 119.88886 * 359.70242 * 7 6 5 28 28 C 1.38147 * 119.94607 * 0.02562 * 27 7 6 29 29 H 0.96698 * 114.00355 * 60.00074 * 1 2 3 30 30 H 1.09001 * 109.46815 * 240.00461 * 2 1 3 31 31 H 1.48506 * 110.00048 * 60.00575 * 3 2 1 32 32 H 1.48502 * 109.99996 * 181.31901 * 3 2 1 33 33 H 1.08005 * 119.97117 * 359.96611 * 5 4 2 34 34 H 1.07993 * 120.03030 * 180.24634 * 6 5 4 35 35 H 0.96997 * 120.00061 * 359.97438 * 14 12 9 36 36 H 1.08995 * 113.61564 * 254.52734 * 17 15 14 37 37 H 1.08999 * 113.61445 * 25.43473 * 17 15 14 38 38 H 1.08000 * 119.99531 * 0.02562 * 21 20 18 39 39 H 1.07999 * 119.99961 * 180.24886 * 22 21 20 40 40 H 1.08000 * 120.00223 * 179.76437 * 23 22 21 41 41 H 1.08005 * 119.99988 * 179.97438 * 24 23 22 42 42 H 1.08000 * 120.00579 * 0.02562 * 25 20 18 43 43 H 1.09003 * 113.61417 * 270.88254 * 26 18 17 44 44 H 1.09002 * 113.61799 * 139.98042 * 26 18 17 45 45 H 1.08003 * 120.02744 * 179.97438 * 27 7 6 46 46 H 1.07997 * 119.97386 * 179.97438 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.6436 -0.0123 2.1880 6 6 3.1004 -0.6599 3.3195 7 6 2.8540 -2.0147 3.4889 8 8 3.3078 -2.6555 4.5980 9 6 4.0311 -1.8722 5.5496 10 9 5.1660 -1.3278 4.9391 11 9 3.2138 -0.8389 6.0204 12 6 4.4519 -2.7458 6.7032 13 8 4.1614 -3.9233 6.7097 14 7 5.1510 -2.2185 7.7277 15 6 5.5605 -3.0678 8.8489 16 1 5.6231 -4.1223 8.5804 17 6 6.8005 -2.5476 9.5951 18 6 6.0993 -2.9732 10.8959 19 1 6.3085 -4.0022 11.1881 20 6 6.2810 -1.9949 12.0277 21 6 5.8424 -0.6910 11.8914 22 6 6.0048 0.2050 12.9314 23 6 6.6148 -0.2001 14.1039 24 6 7.0585 -1.5024 14.2380 25 6 6.8914 -2.3999 13.1999 26 6 4.7698 -2.8053 10.1415 27 6 2.1440 -2.7142 2.5239 28 6 1.6845 -2.0606 1.3968 29 1 -0.3934 0.4417 -0.7650 30 1 1.7922 -0.5138 -0.8900 31 1 1.5614 2.4679 1.2086 32 1 3.5344 1.7704 -0.0321 33 1 2.8397 1.0413 2.0531 34 1 3.6532 -0.1133 4.0691 35 1 5.3836 -1.2769 7.7224 36 1 7.7074 -3.1136 9.3826 37 1 6.9425 -1.4704 9.5080 38 1 5.3691 -0.3737 10.9740 39 1 5.6585 1.2226 12.8265 40 1 6.7451 0.5010 14.9150 41 1 7.5355 -1.8188 15.1539 42 1 7.2385 -3.4172 13.3046 43 1 4.3566 -1.7985 10.2037 44 1 4.0372 -3.5794 10.3701 45 1 1.9513 -3.7690 2.6532 46 1 1.1321 -2.6048 0.6451 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16147626_4549640.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:14 Heat of formation + Delta-G solvation = -106.637577 kcal Electronic energy + Delta-G solvation = -33355.217459 eV Core-core repulsion = 28427.906171 eV Total energy + Delta-G solvation = -4927.311288 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -51.01260 -48.98589 -41.78574 -41.46054 -40.57824 -39.35104 -38.78208 -37.31063 -35.24603 -32.64929 -32.26126 -31.92922 -31.71036 -29.27417 -26.80144 -26.59834 -25.80923 -24.62459 -23.62713 -23.04857 -22.52300 -22.15142 -20.93122 -20.55451 -19.81150 -19.62435 -18.40234 -18.38031 -18.13040 -17.40983 -17.10054 -16.65092 -16.58844 -16.47914 -16.41251 -15.93406 -15.84777 -15.74194 -15.50913 -15.38288 -15.33825 -15.23481 -14.94644 -14.55136 -14.43255 -14.36258 -14.24852 -14.06451 -14.02688 -13.74297 -13.53207 -13.28356 -13.26338 -12.66161 -12.60156 -12.39005 -12.22055 -12.00880 -11.93382 -11.81990 -11.58968 -11.43847 -10.52275 -10.36799 -10.32062 -9.83176 -9.70620 -9.57878 -4.97342 -0.12982 -0.02122 0.36786 0.40812 0.48760 0.54551 1.27753 1.56359 1.61794 1.90725 1.94445 2.29217 2.68577 2.81238 3.10402 3.26949 3.33244 3.40686 3.50651 3.53227 3.64968 3.82440 3.85466 3.92690 4.00946 4.07632 4.09566 4.14508 4.23659 4.27548 4.44249 4.44955 4.57360 4.59362 4.65813 4.66426 4.72168 4.76875 4.82493 4.86997 4.90694 4.96218 5.11371 5.16311 5.19600 5.23869 5.32217 5.57249 5.63414 5.67304 5.69567 5.80210 6.10947 6.37107 6.91170 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.073 4.073 3 Si 0.770 3.230 4 C -0.109 4.109 5 C -0.100 4.100 6 C -0.194 4.194 7 C 0.086 3.914 8 O -0.301 6.301 9 C 0.431 3.569 10 F -0.173 7.173 11 F -0.173 7.173 12 C 0.519 3.481 13 O -0.505 6.505 14 N -0.675 5.675 15 C 0.115 3.885 16 H 0.117 0.883 17 C -0.123 4.123 18 C -0.065 4.065 19 H 0.113 0.887 20 C -0.077 4.077 21 C -0.126 4.126 22 C -0.130 4.130 23 C -0.138 4.138 24 C -0.131 4.131 25 C -0.127 4.127 26 C -0.143 4.143 27 C -0.130 4.130 28 C -0.053 4.053 29 H 0.405 0.595 30 H 0.102 0.898 31 H -0.298 1.298 32 H -0.289 1.289 33 H 0.127 0.873 34 H 0.138 0.862 35 H 0.422 0.578 36 H 0.092 0.908 37 H 0.102 0.898 38 H 0.134 0.866 39 H 0.133 0.867 40 H 0.131 0.869 41 H 0.133 0.867 42 H 0.133 0.867 43 H 0.097 0.903 44 H 0.075 0.925 45 H 0.156 0.844 46 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.510 3.254 -1.843 4.033 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.184 4.184 3 Si 0.677 3.323 4 C -0.110 4.110 5 C -0.118 4.118 6 C -0.212 4.212 7 C 0.043 3.957 8 O -0.218 6.218 9 C 0.353 3.647 10 F -0.154 7.154 11 F -0.155 7.155 12 C 0.297 3.703 13 O -0.378 6.378 14 N -0.328 5.328 15 C 0.013 3.987 16 H 0.135 0.865 17 C -0.161 4.161 18 C -0.084 4.084 19 H 0.131 0.869 20 C -0.077 4.077 21 C -0.144 4.144 22 C -0.148 4.148 23 C -0.156 4.156 24 C -0.149 4.149 25 C -0.145 4.145 26 C -0.181 4.181 27 C -0.148 4.148 28 C -0.071 4.071 29 H 0.257 0.743 30 H 0.120 0.880 31 H -0.226 1.226 32 H -0.216 1.216 33 H 0.144 0.856 34 H 0.156 0.844 35 H 0.261 0.739 36 H 0.110 0.890 37 H 0.120 0.880 38 H 0.152 0.848 39 H 0.151 0.849 40 H 0.149 0.851 41 H 0.151 0.849 42 H 0.151 0.849 43 H 0.116 0.884 44 H 0.094 0.906 45 H 0.173 0.827 46 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 1.860 2.520 -0.832 3.241 hybrid contribution 0.292 0.436 0.525 0.743 sum 2.153 2.956 -0.307 3.669 Atomic orbital electron populations 1.86441 1.16941 1.82401 1.51528 1.24728 0.86074 1.10675 0.96873 0.94417 0.77402 0.75761 0.84746 1.19796 0.99603 0.94980 0.96589 1.20851 0.98192 0.99260 0.93454 1.21503 1.05443 0.93358 1.00935 1.19197 0.97711 0.91835 0.86907 1.86646 1.68317 1.37017 1.29792 1.21937 0.76458 0.79652 0.86658 1.93190 1.51367 1.86556 1.84282 1.93193 1.73206 1.60617 1.88469 1.19361 0.80732 0.87397 0.82768 1.90851 1.53787 1.15698 1.77493 1.45838 1.53012 1.14833 1.19079 1.22943 0.96813 0.96218 0.82770 0.86535 1.23453 0.96778 1.03108 0.92731 1.21302 0.96535 0.99045 0.91502 0.86936 1.19765 0.98416 0.94454 0.95079 1.21215 1.00425 0.93165 0.99590 1.21424 0.99189 1.00446 0.93754 1.21452 0.98922 0.96721 0.98457 1.21441 0.99959 0.93915 0.99543 1.21329 0.99452 1.00473 0.93284 1.23644 0.97063 1.03746 0.93660 1.20833 0.99333 1.01881 0.92762 1.21177 0.96054 0.93364 0.96497 0.74350 0.87981 1.22594 1.21607 0.85591 0.84430 0.73922 0.88968 0.87997 0.84812 0.84893 0.85096 0.84938 0.84863 0.88431 0.90621 0.82681 0.81868 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.60 12.81 -148.98 -1.91 -1.31 16 2 C -0.07 0.08 2.79 71.24 0.20 0.28 16 3 Si 0.77 -1.53 29.84 68.60 2.05 0.52 16 4 C -0.11 -0.57 5.39 -19.85 -0.11 -0.67 16 5 C -0.10 -0.75 8.66 22.25 0.19 -0.56 16 6 C -0.19 -1.67 8.26 22.37 0.18 -1.49 16 7 C 0.09 0.82 6.48 22.51 0.15 0.97 16 8 O -0.30 -3.24 9.60 -73.35 -0.70 -3.94 16 9 C 0.43 2.77 2.05 71.24 0.15 2.92 16 10 F -0.17 -0.86 15.29 44.97 0.69 -0.17 16 11 F -0.17 -0.93 15.30 44.97 0.69 -0.24 16 12 C 0.52 2.89 7.34 87.66 0.64 3.53 16 13 O -0.50 -6.28 16.10 16.00 0.26 -6.02 16 14 N -0.67 1.29 5.35 -440.05 -2.36 -1.07 16 15 C 0.12 -0.37 4.24 45.52 0.19 -0.17 16 16 H 0.12 -0.08 7.46 -2.39 -0.02 -0.09 16 17 C -0.12 0.78 7.30 31.12 0.23 1.01 16 18 C -0.07 0.30 3.98 -11.01 -0.04 0.25 16 19 H 0.11 -0.65 8.09 -2.39 -0.02 -0.67 16 20 C -0.08 0.09 5.29 -19.87 -0.11 -0.01 16 21 C -0.13 0.16 8.60 22.27 0.19 0.35 16 22 C -0.13 0.02 10.05 22.27 0.22 0.24 16 23 C -0.14 -0.07 10.05 22.27 0.22 0.15 16 24 C -0.13 -0.05 10.05 22.27 0.22 0.17 16 25 C -0.13 0.03 9.71 22.27 0.22 0.24 16 26 C -0.14 0.51 7.26 31.12 0.23 0.74 16 27 C -0.13 -0.80 9.99 22.37 0.22 -0.58 16 28 C -0.05 -0.21 9.68 22.25 0.22 0.01 16 29 H 0.40 -4.74 8.74 -74.06 -0.65 -5.39 16 30 H 0.10 -0.62 7.96 -2.39 -0.02 -0.64 16 31 H -0.30 -1.73 7.05 99.48 0.70 -1.02 16 32 H -0.29 -1.04 7.11 99.48 0.71 -0.33 16 33 H 0.13 0.77 4.86 -2.91 -0.01 0.76 16 34 H 0.14 0.94 5.10 -2.91 -0.01 0.93 16 35 H 0.42 -2.98 8.73 -92.71 -0.81 -3.79 16 36 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 37 H 0.10 -0.80 7.69 -2.39 -0.02 -0.82 16 38 H 0.13 -0.66 6.68 -2.91 -0.02 -0.68 16 39 H 0.13 -0.43 8.06 -2.91 -0.02 -0.46 16 40 H 0.13 -0.31 8.06 -2.91 -0.02 -0.34 16 41 H 0.13 -0.35 8.06 -2.91 -0.02 -0.37 16 42 H 0.13 -0.44 8.05 -2.91 -0.02 -0.47 16 43 H 0.10 -0.43 6.33 -2.39 -0.02 -0.44 16 44 H 0.08 -0.14 8.14 -2.39 -0.02 -0.16 16 45 H 0.16 0.44 8.06 -2.91 -0.02 0.41 16 46 H 0.16 -0.18 8.06 -2.91 -0.02 -0.20 16 Total: 0.00 -21.07 391.88 1.76 -19.30 By element: Atomic # 1 Polarization: -14.08 SS G_CDS: -0.37 Total: -14.44 kcal Atomic # 6 Polarization: 3.96 SS G_CDS: 3.42 Total: 7.38 kcal Atomic # 7 Polarization: 1.29 SS G_CDS: -2.36 Total: -1.07 kcal Atomic # 8 Polarization: -8.92 SS G_CDS: -2.36 Total: -11.27 kcal Atomic # 9 Polarization: -1.79 SS G_CDS: 1.38 Total: -0.42 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: 2.05 Total: 0.52 kcal Total: -21.07 1.76 -19.30 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_4549640.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.335 kcal (2) G-P(sol) polarization free energy of solvation -21.068 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.402 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.765 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.303 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.638 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds