Wall clock time and date at job start Sun Mar 7 2021 08:58:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86306 * 109.46878 * 2 1 4 4 C 1.50698 * 109.47333 * 240.00297 * 2 1 3 5 5 C 1.38242 * 119.97777 * 120.00118 * 4 2 1 6 6 C 1.38282 * 120.11652 * 180.02562 * 5 4 2 7 7 C 1.38129 * 120.05466 * 359.97438 * 6 5 4 8 8 C 1.38757 * 119.94012 * 359.97438 * 7 6 5 9 9 O 1.35902 * 120.05313 * 179.97438 * 8 7 6 10 10 C 1.42900 * 116.99916 * 0.02562 * 9 8 7 11 11 C 1.50703 * 109.47361 * 179.97438 * 10 9 8 12 12 O 1.21283 * 119.99488 * 359.97438 * 11 10 9 13 13 N 1.34777 * 120.00290 * 180.02562 * 11 10 9 14 14 C 1.46498 * 119.99828 * 180.27728 * 13 11 10 15 15 H 1.09002 * 112.85447 * 23.52517 * 14 13 11 16 16 C 1.53782 * 113.61542 * 154.72141 * 14 13 11 17 17 C 1.53779 * 87.08025 * 139.97648 * 16 14 13 18 18 H 1.09005 * 113.61412 * 89.11972 * 17 16 14 19 19 C 1.50699 * 113.61510 * 220.01541 * 17 16 14 20 20 C 1.38240 * 119.99845 * 59.73387 * 19 17 16 21 21 C 1.38233 * 120.00350 * 179.76496 * 20 19 17 22 22 C 1.38243 * 119.99509 * 0.48279 * 21 20 19 23 23 C 1.38235 * 120.00066 * 359.78955 * 22 21 20 24 24 C 1.38230 * 120.00374 * 240.00502 * 19 17 16 25 25 C 1.53777 * 87.08273 * 334.57004 * 17 16 14 26 26 C 1.38169 * 119.96844 * 300.24975 * 4 2 1 27 27 H 0.96702 * 114.00402 * 300.00062 * 1 2 3 28 28 H 1.09000 * 109.47514 * 119.99502 * 2 1 3 29 29 H 1.48507 * 109.99686 * 299.99716 * 3 2 1 30 30 H 1.48493 * 110.00183 * 61.31583 * 3 2 1 31 31 H 1.08002 * 119.93738 * 359.97438 * 5 4 2 32 32 H 1.07997 * 119.97772 * 179.97438 * 6 5 4 33 33 H 1.08001 * 120.03038 * 179.97438 * 7 6 5 34 34 H 1.08998 * 109.47421 * 59.99643 * 10 9 8 35 35 H 1.09002 * 109.47461 * 299.99906 * 10 9 8 36 36 H 0.97001 * 119.99727 * 359.97438 * 13 11 10 37 37 H 1.08997 * 113.61719 * 254.52880 * 16 14 13 38 38 H 1.08999 * 113.60977 * 25.42830 * 16 14 13 39 39 H 1.08002 * 119.99640 * 359.97438 * 20 19 17 40 40 H 1.07998 * 120.00514 * 180.24754 * 21 20 19 41 41 H 1.08000 * 119.99575 * 179.76517 * 22 21 20 42 42 H 1.07999 * 119.99813 * 179.97438 * 23 22 21 43 43 H 1.07998 * 120.00175 * 359.97438 * 24 19 17 44 44 H 1.09001 * 113.61338 * 270.87786 * 25 17 16 45 45 H 1.09000 * 113.61355 * 139.98049 * 25 17 16 46 46 H 1.08001 * 120.02938 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.7262 -0.0380 -2.1401 6 6 3.1883 -0.6868 -3.2704 7 6 2.8571 -2.0092 -3.4930 8 6 2.0603 -2.6866 -2.5810 9 8 1.7326 -3.9875 -2.7981 10 6 2.2436 -4.5958 -3.9859 11 6 1.7804 -6.0281 -4.0561 12 8 1.0818 -6.4833 -3.1753 13 7 2.1432 -6.8035 -5.0971 14 6 1.6878 -8.1941 -5.1683 15 1 0.7782 -8.3716 -4.5945 16 6 1.6311 -8.7512 -6.6005 17 6 2.1879 -10.0651 -6.0275 18 1 1.4156 -10.7554 -5.6880 19 6 3.2144 -10.7229 -6.9132 20 6 4.3768 -10.0505 -7.2415 21 6 5.3206 -10.6557 -8.0500 22 6 5.0976 -11.9296 -8.5384 23 6 3.9328 -12.5998 -8.2147 24 6 2.9913 -11.9965 -7.4020 25 6 2.7998 -9.2211 -4.8970 26 6 1.5930 -2.0316 -1.4512 27 1 -0.3934 0.4417 0.7650 28 1 1.7924 -0.5137 0.8900 29 1 1.5614 2.4679 -1.2086 30 1 1.5878 2.4586 1.2241 31 1 2.9859 0.9961 -1.9679 32 1 3.8087 -0.1593 -3.9797 33 1 3.2179 -2.5155 -4.3762 34 1 3.3331 -4.5671 -3.9691 35 1 1.8794 -4.0526 -4.8579 36 1 2.7022 -6.4395 -5.8013 37 1 0.6187 -8.8409 -6.9944 38 1 2.3120 -8.2524 -7.2902 39 1 4.5489 -9.0535 -6.8636 40 1 6.2305 -10.1319 -8.3033 41 1 5.8333 -12.4010 -9.1732 42 1 3.7584 -13.5949 -8.5966 43 1 2.0814 -12.5204 -7.1487 44 1 3.8003 -8.8508 -5.1209 45 1 2.7309 -9.6902 -3.9155 46 1 0.9691 -2.5554 -0.7421 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16147626_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:21 Heat of formation + Delta-G solvation = -16.456735 kcal Electronic energy + Delta-G solvation = -27389.834395 eV Core-core repulsion = 23405.341593 eV Total energy + Delta-G solvation = -3984.492802 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.151 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -41.71211 -41.20816 -40.28209 -39.07796 -38.51654 -37.41241 -34.87313 -32.59895 -32.04443 -31.76551 -31.44057 -29.31339 -26.85943 -26.71887 -25.79179 -23.65655 -23.59262 -22.95712 -22.05060 -21.57928 -20.34889 -19.18623 -18.59993 -18.31368 -18.05687 -17.45001 -17.38360 -17.07478 -16.69045 -16.41996 -15.93226 -15.80139 -15.64783 -15.55761 -15.25558 -14.92095 -14.53946 -14.30453 -14.19345 -14.12863 -13.95092 -13.77896 -13.61652 -13.45974 -13.30772 -13.11700 -12.56432 -12.50969 -12.31528 -12.14115 -12.02403 -11.82357 -11.72916 -11.65817 -11.46908 -10.97039 -10.58675 -10.16258 -9.89220 -9.80297 -9.54135 -9.28515 -4.92152 0.20358 0.39161 0.44195 0.51609 1.26659 1.40108 1.49749 1.62128 1.95140 2.58612 2.63921 2.84823 3.35815 3.43058 3.51684 3.66617 3.72383 3.78449 3.83869 3.92163 4.00534 4.05382 4.08792 4.13261 4.15157 4.18926 4.26694 4.27598 4.30761 4.48698 4.54881 4.63184 4.64452 4.69074 4.73028 4.82922 4.95547 4.97826 5.00896 5.09780 5.17200 5.20840 5.23548 5.36507 5.46226 5.49322 5.60115 5.66019 5.68608 5.74657 6.13878 6.27182 6.46086 6.55108 7.10561 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.099 4.099 3 Si 0.783 3.217 4 C -0.048 4.048 5 C -0.159 4.159 6 C -0.070 4.070 7 C -0.202 4.202 8 C 0.113 3.887 9 O -0.323 6.323 10 C 0.037 3.963 11 C 0.513 3.487 12 O -0.575 6.575 13 N -0.697 5.697 14 C 0.119 3.881 15 H 0.094 0.906 16 C -0.121 4.121 17 C -0.069 4.069 18 H 0.102 0.898 19 C -0.076 4.076 20 C -0.123 4.123 21 C -0.128 4.128 22 C -0.138 4.138 23 C -0.131 4.131 24 C -0.132 4.132 25 C -0.141 4.141 26 C -0.151 4.151 27 H 0.395 0.605 28 H 0.090 0.910 29 H -0.294 1.294 30 H -0.287 1.287 31 H 0.148 0.852 32 H 0.166 0.834 33 H 0.164 0.836 34 H 0.129 0.871 35 H 0.125 0.875 36 H 0.422 0.578 37 H 0.081 0.919 38 H 0.106 0.894 39 H 0.139 0.861 40 H 0.137 0.863 41 H 0.132 0.868 42 H 0.131 0.869 43 H 0.128 0.872 44 H 0.102 0.898 45 H 0.062 0.938 46 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.236 2.044 -5.226 9.157 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.206 4.206 3 Si 0.687 3.313 4 C -0.048 4.048 5 C -0.177 4.177 6 C -0.087 4.087 7 C -0.221 4.221 8 C 0.068 3.932 9 O -0.237 6.237 10 C -0.041 4.041 11 C 0.299 3.701 12 O -0.453 6.453 13 N -0.351 5.351 14 C 0.014 3.986 15 H 0.113 0.887 16 C -0.159 4.159 17 C -0.088 4.088 18 H 0.120 0.880 19 C -0.077 4.077 20 C -0.141 4.141 21 C -0.146 4.146 22 C -0.156 4.156 23 C -0.149 4.149 24 C -0.150 4.150 25 C -0.179 4.179 26 C -0.170 4.170 27 H 0.245 0.755 28 H 0.108 0.892 29 H -0.222 1.222 30 H -0.214 1.214 31 H 0.165 0.835 32 H 0.183 0.817 33 H 0.181 0.819 34 H 0.146 0.854 35 H 0.142 0.858 36 H 0.260 0.740 37 H 0.100 0.900 38 H 0.124 0.876 39 H 0.157 0.843 40 H 0.155 0.845 41 H 0.150 0.850 42 H 0.149 0.851 43 H 0.146 0.854 44 H 0.120 0.880 45 H 0.081 0.919 46 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 6.495 2.097 -5.024 8.475 hybrid contribution -1.268 -0.488 0.405 1.418 sum 5.227 1.609 -4.619 7.159 Atomic orbital electron populations 1.86556 1.18691 1.80894 1.50957 1.25266 0.84076 1.12910 0.98333 0.93977 0.90017 0.70831 0.76497 1.19288 0.97028 0.92642 0.95891 1.21176 1.00608 1.00707 0.95202 1.21329 0.97345 0.93528 0.96526 1.21644 1.02454 0.96851 1.01119 1.19180 0.95769 0.82948 0.95292 1.86121 1.71436 1.23259 1.42878 1.22759 1.02110 0.90563 0.88661 1.20612 0.79607 0.87995 0.81884 1.90762 1.39063 1.75574 1.39947 1.45668 1.53149 1.11885 1.24386 1.22502 0.98181 0.79340 0.98540 0.88749 1.23404 1.03001 0.94431 0.95040 1.21301 0.96699 0.95680 0.95144 0.88007 1.19776 0.95565 0.94429 0.97880 1.21228 0.93576 1.00762 0.98541 1.21450 0.99921 0.95541 0.97652 1.21460 0.97917 0.95691 1.00560 1.21420 0.94461 1.00651 0.98409 1.21312 0.99960 0.95372 0.98334 1.23604 0.99504 0.96178 0.98636 1.20288 1.03684 0.95027 0.97993 0.75485 0.89179 1.22153 1.21423 0.83519 0.81675 0.81890 0.85390 0.85784 0.73970 0.90011 0.87577 0.84327 0.84508 0.85028 0.85116 0.85369 0.88017 0.91877 0.87047 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.25 12.74 -148.98 -1.90 -5.15 16 2 C -0.10 -0.23 2.81 71.24 0.20 -0.03 16 3 Si 0.78 -1.17 29.79 68.60 2.04 0.87 16 4 C -0.05 -0.25 5.42 -19.88 -0.11 -0.36 16 5 C -0.16 -0.08 8.67 22.28 0.19 0.11 16 6 C -0.07 0.18 10.04 22.25 0.22 0.40 16 7 C -0.20 0.25 9.04 22.37 0.20 0.45 16 8 C 0.11 0.69 6.69 22.51 0.15 0.84 16 9 O -0.32 -2.72 9.67 -73.41 -0.71 -3.43 16 10 C 0.04 -0.08 5.22 71.24 0.37 0.30 16 11 C 0.51 1.86 7.91 87.66 0.69 2.55 16 12 O -0.57 -9.15 16.10 16.00 0.26 -8.89 16 13 N -0.70 2.85 5.35 -440.04 -2.36 0.49 16 14 C 0.12 -0.20 4.24 45.52 0.19 -0.01 16 15 H 0.09 0.36 7.46 -2.39 -0.02 0.35 16 16 C -0.12 0.65 7.30 31.12 0.23 0.88 16 17 C -0.07 0.20 3.98 -11.02 -0.04 0.16 16 18 H 0.10 -0.28 8.10 -2.38 -0.02 -0.30 16 19 C -0.08 0.05 5.29 -19.87 -0.11 -0.05 16 20 C -0.12 0.25 8.60 22.27 0.19 0.44 16 21 C -0.13 0.15 10.05 22.27 0.22 0.37 16 22 C -0.14 -0.02 10.05 22.27 0.22 0.21 16 23 C -0.13 -0.10 10.05 22.27 0.22 0.12 16 24 C -0.13 -0.09 9.71 22.27 0.22 0.12 16 25 C -0.14 0.33 7.25 31.12 0.23 0.55 16 26 C -0.15 -1.36 9.55 22.37 0.21 -1.15 16 27 H 0.39 -1.08 8.74 -74.06 -0.65 -1.73 16 28 H 0.09 -0.07 7.96 -2.39 -0.02 -0.09 16 29 H -0.29 -1.48 7.11 99.48 0.71 -0.77 16 30 H -0.29 -0.75 7.11 99.48 0.71 -0.04 16 31 H 0.15 -0.58 4.87 -2.91 -0.01 -0.60 16 32 H 0.17 -1.55 8.06 -2.91 -0.02 -1.58 16 33 H 0.16 -1.45 6.30 -2.91 -0.02 -1.46 16 34 H 0.13 -1.17 7.66 -2.39 -0.02 -1.19 16 35 H 0.12 -1.04 7.66 -2.39 -0.02 -1.06 16 36 H 0.42 -5.11 8.73 -92.71 -0.81 -5.92 16 37 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 38 H 0.11 -0.88 7.69 -2.39 -0.02 -0.90 16 39 H 0.14 -0.92 6.68 -2.91 -0.02 -0.94 16 40 H 0.14 -0.68 8.06 -2.91 -0.02 -0.70 16 41 H 0.13 -0.39 8.06 -2.91 -0.02 -0.41 16 42 H 0.13 -0.28 8.06 -2.91 -0.02 -0.30 16 43 H 0.13 -0.22 8.06 -2.91 -0.02 -0.24 16 44 H 0.10 -0.48 6.32 -2.39 -0.02 -0.49 16 45 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 46 H 0.11 1.33 8.06 -2.91 -0.02 1.31 16 Total: 0.00 -28.27 382.52 0.65 -27.62 By element: Atomic # 1 Polarization: -17.04 SS G_CDS: -0.40 Total: -17.44 kcal Atomic # 6 Polarization: 2.22 SS G_CDS: 3.72 Total: 5.94 kcal Atomic # 7 Polarization: 2.85 SS G_CDS: -2.36 Total: 0.49 kcal Atomic # 8 Polarization: -15.12 SS G_CDS: -2.35 Total: -17.47 kcal Atomic # 14 Polarization: -1.17 SS G_CDS: 2.04 Total: 0.87 kcal Total: -28.27 0.65 -27.62 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.161 kcal (2) G-P(sol) polarization free energy of solvation -28.270 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.110 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.653 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.618 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.457 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds