Wall clock time and date at job start Sun Mar 7 2021 08:58:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35982 * 116.99952 * 2 1 4 4 C 1.38679 * 119.99717 * 180.02562 * 3 2 1 5 5 C 1.38154 * 119.99820 * 180.02562 * 4 3 2 6 6 C 1.50700 * 119.99885 * 180.02562 * 5 4 3 7 7 O 1.42903 * 109.47058 * 254.97443 * 6 5 4 8 8 Si 1.86295 * 109.47249 * 14.97736 * 6 5 4 9 9 C 1.38678 * 119.99741 * 0.02562 * 5 4 3 10 10 O 1.35985 * 119.99607 * 180.02562 * 9 5 4 11 11 C 1.42901 * 117.00124 * 179.97438 * 10 9 5 12 12 C 1.50696 * 109.47492 * 179.97438 * 11 10 9 13 13 O 1.21284 * 119.99956 * 0.02562 * 12 11 10 14 14 N 1.34768 * 120.00132 * 179.97438 * 12 11 10 15 15 C 1.46500 * 120.00289 * 179.97438 * 14 12 11 16 16 H 1.08999 * 112.84772 * 336.20276 * 15 14 12 17 17 C 1.53781 * 113.69176 * 107.46650 * 15 14 12 18 18 C 1.54049 * 87.08031 * 139.99046 * 17 15 14 19 19 H 1.09000 * 113.61076 * 89.06984 * 18 17 15 20 20 C 1.50690 * 113.70074 * 220.05368 * 18 17 15 21 21 C 1.38242 * 119.99897 * 37.14728 * 20 18 17 22 22 C 1.38233 * 120.00067 * 179.74459 * 21 20 18 23 23 C 1.38243 * 119.99724 * 0.53275 * 22 21 20 24 24 C 1.38231 * 120.00207 * 359.74450 * 23 22 21 25 25 C 1.38234 * 119.99987 * 359.97438 * 24 23 22 26 26 C 1.53781 * 113.61760 * 205.00346 * 15 14 12 27 27 C 1.38714 * 120.00302 * 0.27026 * 9 5 4 28 28 C 1.38104 * 119.99785 * 359.45641 * 27 9 5 29 29 H 1.08997 * 109.47399 * 179.97438 * 1 2 3 30 30 H 1.09004 * 109.46997 * 299.99746 * 1 2 3 31 31 H 1.09001 * 109.47424 * 59.99524 * 1 2 3 32 32 H 1.07999 * 119.99981 * 0.04500 * 4 3 2 33 33 H 1.09001 * 109.46875 * 134.98008 * 6 5 4 34 34 H 0.96691 * 114.00383 * 300.00267 * 7 6 5 35 35 H 1.48503 * 109.99731 * 59.99812 * 8 6 5 36 36 H 1.48498 * 109.99986 * 181.31692 * 8 6 5 37 37 H 1.09000 * 109.47128 * 59.99228 * 11 10 9 38 38 H 1.09002 * 109.46710 * 300.00041 * 11 10 9 39 39 H 0.97000 * 120.00330 * 0.02562 * 14 12 11 40 40 H 1.09005 * 113.61471 * 254.54629 * 17 15 14 41 41 H 1.09003 * 113.61469 * 25.44407 * 17 15 14 42 42 H 1.07998 * 120.00098 * 0.02562 * 21 20 18 43 43 H 1.07996 * 120.00406 * 180.29628 * 22 21 20 44 44 H 1.07997 * 119.99511 * 179.76598 * 23 22 21 45 45 H 1.07995 * 119.99842 * 180.02562 * 24 23 22 46 46 H 1.08000 * 120.00167 * 180.02562 * 25 24 23 47 47 H 1.09002 * 113.61445 * 334.48426 * 26 15 14 48 48 H 1.09002 * 113.61408 * 105.30156 * 26 15 14 49 49 H 1.07998 * 120.00276 * 179.70744 * 27 9 5 50 50 H 1.08006 * 120.00204 * 180.25551 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4312 1.2841 -0.0005 5 6 4.0585 2.5151 0.0000 6 6 5.5634 2.5939 -0.0012 7 8 6.0219 2.9665 1.3000 8 14 6.2719 0.9324 -0.4571 9 6 3.3031 3.6781 0.0016 10 8 3.9205 4.8897 0.0016 11 6 3.0806 6.0459 0.0027 12 6 3.9348 7.2874 0.0032 13 8 5.1439 7.1916 0.0021 14 7 3.3552 8.5041 0.0038 15 6 4.1856 9.7110 0.0048 16 1 5.1825 9.5385 0.4103 17 6 4.1880 10.4605 -1.3381 18 6 4.1390 11.7650 -0.5202 19 1 5.1233 12.1530 -0.2578 20 6 3.2323 12.8150 -1.1084 21 6 2.0443 12.4439 -1.7103 22 6 1.2100 13.4076 -2.2452 23 6 1.5688 14.7414 -2.1881 24 6 2.7594 15.1120 -1.5915 25 6 3.5910 14.1489 -1.0513 26 6 3.4825 10.9420 0.6008 27 6 1.9179 3.6055 0.0083 28 6 1.2909 2.3750 0.0021 29 1 -0.3634 -1.0276 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3634 0.5139 -0.8899 32 1 4.0194 0.3783 -0.0017 33 1 5.8876 3.3390 -0.7277 34 1 5.6915 3.8232 1.6031 35 1 5.8025 0.5336 -1.8084 36 1 7.7556 0.9884 -0.4308 37 1 2.4520 6.0374 0.8932 38 1 2.4507 6.0381 -0.8868 39 1 2.3883 8.5807 0.0042 40 1 5.1099 10.3355 -1.9062 41 1 3.2939 10.2867 -1.9368 42 1 1.7660 11.4016 -1.7585 43 1 0.2797 13.1181 -2.7112 44 1 0.9187 15.4939 -2.6095 45 1 3.0394 16.1540 -1.5465 46 1 4.5209 14.4384 -0.5848 47 1 2.3955 10.8998 0.5323 48 1 3.8338 11.2049 1.5986 49 1 1.3297 4.5113 0.0144 50 1 0.2123 2.3185 0.0032 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:25 Heat of formation + Delta-G solvation = -56.429260 kcal Electronic energy + Delta-G solvation = -32198.501319 eV Core-core repulsion = 27738.055367 eV Total energy + Delta-G solvation = -4460.445952 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -41.88699 -41.48561 -40.54743 -39.81819 -38.76091 -37.93221 -36.82762 -34.87512 -32.78969 -32.03743 -31.81209 -31.01322 -29.51223 -28.09869 -26.86830 -26.49180 -25.99540 -23.87996 -23.62444 -22.53299 -22.37566 -21.69765 -20.48850 -19.54775 -18.83351 -18.51458 -18.16628 -17.87322 -17.56706 -17.38758 -17.01480 -16.69655 -16.53641 -16.06203 -15.99839 -15.66039 -15.62805 -15.39897 -15.25353 -15.15738 -14.46562 -14.39222 -14.29818 -14.13974 -14.04581 -13.94813 -13.64601 -13.62485 -13.48836 -13.19915 -13.08346 -12.68915 -12.63310 -12.42571 -12.25323 -11.92822 -11.86418 -11.78495 -11.56863 -11.52200 -11.14669 -10.99593 -10.88608 -10.21768 -10.07151 -9.88418 -9.62654 -8.82108 -4.73993 0.07566 0.34898 0.36028 0.43611 1.37494 1.40295 1.54140 1.79347 2.14887 2.25689 2.49426 2.56283 2.76080 3.28112 3.38645 3.52243 3.55079 3.59090 3.64555 3.73250 3.77388 3.83324 3.92517 3.96103 4.03039 4.06080 4.08174 4.11627 4.12637 4.17351 4.17618 4.33879 4.43555 4.44547 4.50777 4.52843 4.53451 4.59391 4.65097 4.67667 4.81538 4.88096 4.98533 5.02865 5.05731 5.10222 5.10869 5.18534 5.36093 5.41127 5.51014 5.57711 5.64924 6.03363 6.06547 6.27265 6.38450 6.74863 7.01686 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.314 6.314 3 C 0.103 3.897 4 C -0.103 4.103 5 C -0.098 4.098 6 C -0.072 4.072 7 O -0.533 6.533 8 Si 0.743 3.257 9 C 0.099 3.901 10 O -0.290 6.290 11 C 0.040 3.960 12 C 0.517 3.483 13 O -0.511 6.511 14 N -0.717 5.717 15 C 0.124 3.876 16 H 0.120 0.880 17 C -0.145 4.145 18 C -0.071 4.071 19 H 0.104 0.896 20 C -0.070 4.070 21 C -0.118 4.118 22 C -0.118 4.118 23 C -0.124 4.124 24 C -0.117 4.117 25 C -0.115 4.115 26 C -0.135 4.135 27 C -0.165 4.165 28 C -0.165 4.165 29 H 0.103 0.897 30 H 0.056 0.944 31 H 0.055 0.945 32 H 0.147 0.853 33 H 0.078 0.922 34 H 0.368 0.632 35 H -0.251 1.251 36 H -0.254 1.254 37 H 0.095 0.905 38 H 0.093 0.907 39 H 0.402 0.598 40 H 0.077 0.923 41 H 0.090 0.910 42 H 0.120 0.880 43 H 0.122 0.878 44 H 0.122 0.878 45 H 0.123 0.877 46 H 0.122 0.878 47 H 0.090 0.910 48 H 0.080 0.920 49 H 0.133 0.867 50 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.849 2.131 0.475 8.147 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.227 6.227 3 C 0.058 3.942 4 C -0.121 4.121 5 C -0.099 4.099 6 C -0.180 4.180 7 O -0.339 6.339 8 Si 0.642 3.358 9 C 0.054 3.946 10 O -0.203 6.203 11 C -0.038 4.038 12 C 0.301 3.699 13 O -0.385 6.385 14 N -0.370 5.370 15 C 0.020 3.980 16 H 0.137 0.863 17 C -0.184 4.184 18 C -0.090 4.090 19 H 0.122 0.878 20 C -0.070 4.070 21 C -0.136 4.136 22 C -0.136 4.136 23 C -0.142 4.142 24 C -0.135 4.135 25 C -0.133 4.133 26 C -0.173 4.173 27 C -0.184 4.184 28 C -0.184 4.184 29 H 0.121 0.879 30 H 0.075 0.925 31 H 0.074 0.926 32 H 0.164 0.836 33 H 0.096 0.904 34 H 0.216 0.784 35 H -0.175 1.175 36 H -0.179 1.179 37 H 0.112 0.888 38 H 0.111 0.889 39 H 0.237 0.763 40 H 0.096 0.904 41 H 0.108 0.892 42 H 0.138 0.862 43 H 0.140 0.860 44 H 0.140 0.860 45 H 0.141 0.859 46 H 0.140 0.860 47 H 0.108 0.892 48 H 0.099 0.901 49 H 0.151 0.849 50 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -5.854 0.875 -0.122 5.920 hybrid contribution -1.625 2.197 -0.417 2.764 sum -7.479 3.072 -0.538 8.103 Atomic orbital electron populations 1.23102 0.78069 1.04400 1.01315 1.86115 1.21539 1.26174 1.88881 1.18812 0.91910 0.84574 0.98881 1.20060 0.91638 0.96775 1.03610 1.19484 0.96617 0.90029 1.03816 1.25370 0.91476 1.12365 0.88831 1.86705 1.73746 1.41942 1.31471 0.93026 0.79767 0.80262 0.82788 1.18660 0.90825 0.84596 1.00481 1.86115 1.33879 1.11069 1.89262 1.22466 0.93210 0.84173 1.03999 1.20062 0.88861 0.84270 0.76667 1.90790 1.14143 1.86525 1.47005 1.45808 1.10308 1.04973 1.75933 1.22586 0.96454 0.81802 0.97191 0.86260 1.23675 1.03576 0.94147 0.96979 1.21366 0.98652 0.92507 0.96429 0.87819 1.19618 0.95125 0.93871 0.98403 1.20974 0.94364 0.99364 0.98913 1.21168 0.99606 0.93184 0.99642 1.21209 0.97007 0.96315 0.99636 1.21201 0.94635 0.99598 0.98061 1.21096 0.99875 0.92427 0.99929 1.23456 1.00811 0.94009 0.99009 1.21013 0.92825 0.98688 1.05869 1.21081 1.00324 0.91510 1.05472 0.87857 0.92538 0.92633 0.83633 0.90410 0.78379 1.17528 1.17899 0.88753 0.88901 0.76314 0.90413 0.89194 0.86240 0.86043 0.86042 0.85943 0.85986 0.89193 0.90107 0.84929 0.84704 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.41 10.50 -19.68 -0.21 -0.61 16 3 C 0.10 0.16 6.69 -39.24 -0.26 -0.10 16 4 C -0.10 -0.20 8.59 -39.45 -0.34 -0.54 16 5 C -0.10 -0.25 5.28 -104.49 -0.55 -0.80 16 6 C -0.07 -0.23 2.33 36.01 0.08 -0.14 16 7 O -0.53 -2.12 12.65 -35.23 -0.45 -2.57 16 8 Si 0.74 1.40 30.17 -169.99 -5.13 -3.73 16 9 C 0.10 0.18 6.62 -39.24 -0.26 -0.08 16 10 O -0.29 -0.61 8.56 -39.60 -0.34 -0.95 16 11 C 0.04 -0.06 5.22 36.00 0.19 0.13 16 12 C 0.52 0.36 7.91 -10.99 -0.09 0.27 16 13 O -0.51 -2.87 16.10 -14.36 -0.23 -3.10 16 14 N -0.72 1.65 5.36 -53.02 -0.28 1.36 16 15 C 0.12 -0.18 4.24 -67.12 -0.28 -0.47 16 16 H 0.12 0.04 7.46 -51.93 -0.39 -0.34 16 17 C -0.15 0.22 7.27 -25.78 -0.19 0.03 16 18 C -0.07 0.12 3.99 -90.82 -0.36 -0.24 16 19 H 0.10 -0.21 8.10 -51.93 -0.42 -0.63 16 20 C -0.07 0.03 5.29 -104.62 -0.55 -0.53 16 21 C -0.12 0.07 8.63 -39.58 -0.34 -0.27 16 22 C -0.12 0.03 10.05 -39.58 -0.40 -0.37 16 23 C -0.12 -0.01 10.05 -39.58 -0.40 -0.40 16 24 C -0.12 -0.01 10.05 -39.59 -0.40 -0.41 16 25 C -0.12 -0.01 9.71 -39.58 -0.38 -0.39 16 26 C -0.13 0.36 7.29 -25.92 -0.19 0.17 16 27 C -0.17 0.04 9.03 -39.45 -0.36 -0.32 16 28 C -0.17 0.01 9.03 -39.45 -0.36 -0.35 16 29 H 0.10 -0.38 8.14 -51.93 -0.42 -0.80 16 30 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 31 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 32 H 0.15 0.05 5.13 -52.49 -0.27 -0.22 16 33 H 0.08 0.31 7.82 -51.93 -0.41 -0.10 16 34 H 0.37 0.96 8.60 45.56 0.39 1.35 16 35 H -0.25 -0.76 7.11 56.52 0.40 -0.36 16 36 H -0.25 -1.17 7.11 56.52 0.40 -0.77 16 37 H 0.09 -0.38 7.65 -51.93 -0.40 -0.78 16 38 H 0.09 -0.35 7.67 -51.93 -0.40 -0.75 16 39 H 0.40 -2.17 8.73 -40.82 -0.36 -2.53 16 40 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 41 H 0.09 -0.18 6.31 -51.93 -0.33 -0.51 16 42 H 0.12 -0.28 6.65 -52.49 -0.35 -0.63 16 43 H 0.12 -0.23 8.06 -52.49 -0.42 -0.65 16 44 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 45 H 0.12 -0.17 8.06 -52.49 -0.42 -0.59 16 46 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 47 H 0.09 -0.30 7.71 -51.93 -0.40 -0.70 16 48 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 49 H 0.13 -0.42 6.29 -52.49 -0.33 -0.75 16 50 H 0.14 -0.32 6.29 -52.48 -0.33 -0.65 16 LS Contribution 410.99 15.07 6.19 6.19 Total: 0.00 -9.30 410.99 -11.82 -21.12 By element: Atomic # 1 Polarization: -6.91 SS G_CDS: -6.93 Total: -13.84 kcal Atomic # 6 Polarization: 0.55 SS G_CDS: -4.44 Total: -3.89 kcal Atomic # 7 Polarization: 1.65 SS G_CDS: -0.28 Total: 1.36 kcal Atomic # 8 Polarization: -6.00 SS G_CDS: -1.22 Total: -7.22 kcal Atomic # 14 Polarization: 1.40 SS G_CDS: -5.13 Total: -3.73 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -9.30 -11.82 -21.12 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.309 kcal (2) G-P(sol) polarization free energy of solvation -9.301 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.610 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.819 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.120 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.429 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds