Wall clock time and date at job start Sun Mar 7 2021 08:58:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35898 * 117.00023 * 2 1 4 4 C 1.38616 * 120.02625 * 180.02562 * 3 2 1 5 5 C 1.38656 * 119.88679 * 180.30091 * 4 3 2 6 6 O 1.35904 * 120.02297 * 179.69487 * 5 4 3 7 7 C 1.42900 * 117.00140 * 0.02562 * 6 5 4 8 8 C 1.50694 * 109.47262 * 179.97438 * 7 6 5 9 9 O 1.21285 * 119.99594 * 0.02562 * 8 7 6 10 10 N 1.34770 * 120.00346 * 179.97438 * 8 7 6 11 11 C 1.46505 * 120.00262 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.84854 * 23.81096 * 11 10 8 13 13 C 1.53780 * 113.61226 * 155.00328 * 11 10 8 14 14 C 1.53774 * 87.07954 * 139.98435 * 13 11 10 15 15 H 1.08997 * 113.62057 * 89.19817 * 14 13 11 16 16 C 1.50704 * 113.61453 * 220.01879 * 14 13 11 17 17 C 1.38233 * 120.00185 * 59.72197 * 16 14 13 18 18 C 1.38234 * 119.99988 * 179.76508 * 17 16 14 19 19 C 1.38231 * 120.00057 * 0.48842 * 18 17 16 20 20 C 1.38242 * 119.99987 * 359.79168 * 19 18 17 21 21 C 1.38232 * 119.99872 * 359.95408 * 20 19 18 22 22 C 1.53778 * 113.61469 * 252.50204 * 11 10 8 23 23 C 1.38746 * 119.94590 * 359.44605 * 5 4 3 24 24 C 1.50705 * 119.97375 * 180.27993 * 23 5 4 25 25 O 1.42900 * 109.47309 * 75.27139 * 24 23 5 26 26 Si 1.86301 * 109.47349 * 195.27376 * 24 23 5 27 27 C 1.38193 * 120.05728 * 0.55004 * 23 5 4 28 28 C 1.38157 * 120.10557 * 359.72907 * 27 23 5 29 29 H 1.09002 * 109.47191 * 299.99582 * 1 2 3 30 30 H 1.09001 * 109.47001 * 59.99872 * 1 2 3 31 31 H 1.08998 * 109.47037 * 180.02562 * 1 2 3 32 32 H 1.08002 * 120.05254 * 0.02562 * 4 3 2 33 33 H 1.09004 * 109.47231 * 299.99964 * 7 6 5 34 34 H 1.09006 * 109.46942 * 59.99962 * 7 6 5 35 35 H 0.97005 * 119.99776 * 0.02562 * 10 8 7 36 36 H 1.09000 * 113.61296 * 254.52828 * 13 11 10 37 37 H 1.08997 * 113.61813 * 25.43473 * 13 11 10 38 38 H 1.07998 * 119.99517 * 0.02562 * 17 16 14 39 39 H 1.08002 * 119.99887 * 180.25506 * 18 17 16 40 40 H 1.08003 * 120.00064 * 179.76496 * 19 18 17 41 41 H 1.07997 * 119.99756 * 179.97438 * 20 19 18 42 42 H 1.07995 * 120.00042 * 180.02562 * 21 20 19 43 43 H 1.09000 * 113.61283 * 334.56601 * 22 11 10 44 44 H 1.08997 * 113.61601 * 105.47571 * 22 11 10 45 45 H 1.08997 * 109.46616 * 315.27685 * 24 23 5 46 46 H 0.96708 * 113.99822 * 60.00201 * 25 24 23 47 47 H 1.48500 * 110.00057 * 179.97438 * 26 24 23 48 48 H 1.48504 * 109.99853 * 301.31944 * 26 24 23 49 49 H 1.08002 * 119.94997 * 179.74560 * 27 23 5 50 50 H 1.08003 * 119.97248 * 179.97438 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4302 1.2840 -0.0005 5 6 4.0567 2.5210 0.0058 6 8 5.4136 2.5959 0.0115 7 6 6.1316 1.3604 0.0101 8 6 7.6124 1.6399 0.0165 9 8 8.0134 2.7846 0.0221 10 7 8.4911 0.6181 0.0169 11 6 9.9307 0.8899 0.0236 12 1 10.1745 1.8701 0.4332 13 6 10.7705 -0.2526 0.6189 14 6 11.7894 0.0185 -0.5005 15 1 12.5431 0.7596 -0.2349 16 6 12.3832 -1.2337 -1.0926 17 6 11.5624 -2.1734 -1.6878 18 6 12.1076 -3.3197 -2.2352 19 6 13.4725 -3.5311 -2.1784 20 6 14.2927 -2.5942 -1.5780 21 6 13.7480 -1.4454 -1.0353 22 6 10.6201 0.5920 -1.3183 23 6 3.2971 3.6821 0.0010 24 6 3.9774 5.0268 0.0015 25 8 4.5032 5.2952 -1.2999 26 14 2.7441 6.3466 0.4573 27 6 1.9173 3.6065 0.0014 28 6 1.2907 2.3752 0.0010 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0276 0.0005 32 1 4.0196 0.3791 -0.0014 33 1 5.8664 0.7850 0.8971 34 1 5.8735 0.7912 -0.8829 35 1 8.1704 -0.2974 0.0127 36 1 11.1520 -0.0395 1.6175 37 1 10.2923 -1.2294 0.5469 38 1 10.4957 -2.0098 -1.7289 39 1 11.4668 -4.0518 -2.7039 40 1 13.8980 -4.4285 -2.6027 41 1 15.3590 -2.7596 -1.5333 42 1 14.3888 -0.7133 -0.5666 43 1 10.1007 -0.1539 -1.9199 44 1 10.8803 1.4869 -1.8836 45 1 4.7902 5.0225 0.7278 46 1 3.8343 5.3141 -1.9981 47 1 3.4028 7.6775 0.4619 48 1 1.6150 6.3415 -0.5072 49 1 1.3277 4.5114 0.0019 50 1 0.2121 2.3187 0.0017 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_4974312.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:28 Heat of formation + Delta-G solvation = -51.274806 kcal Electronic energy + Delta-G solvation = -32279.768308 eV Core-core repulsion = 27819.545870 eV Total energy + Delta-G solvation = -4460.222438 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -41.84259 -41.44171 -40.48976 -39.78373 -38.75301 -38.11692 -36.89790 -34.77749 -32.29549 -31.99739 -31.77944 -31.29965 -29.45129 -28.50710 -26.80639 -26.06495 -25.93800 -23.82924 -23.57705 -22.51448 -22.40160 -21.60529 -20.42502 -19.96516 -18.53843 -18.25314 -17.96904 -17.72853 -17.49322 -17.20611 -16.91321 -16.75319 -16.45493 -16.41104 -15.97494 -15.91481 -15.51761 -15.46480 -15.19553 -15.10222 -14.67313 -14.47127 -14.34471 -14.21858 -13.98172 -13.66863 -13.57789 -13.55395 -13.39759 -13.14778 -13.11776 -12.62015 -12.54801 -12.37121 -12.27311 -11.97044 -11.86257 -11.73574 -11.68413 -11.52760 -11.50247 -10.80392 -10.36646 -10.12187 -9.83997 -9.69070 -9.57954 -9.07367 -4.88136 0.21793 0.34006 0.40609 0.48011 1.40094 1.45307 1.52010 1.63625 2.05602 2.15398 2.56982 2.59731 2.80782 3.35895 3.49635 3.59074 3.61268 3.65338 3.68813 3.79759 3.84314 3.87642 3.94060 3.98312 4.01442 4.03690 4.07702 4.11446 4.13975 4.21891 4.26057 4.38003 4.41304 4.49939 4.52243 4.55878 4.59568 4.65699 4.73258 4.77679 4.88112 4.95107 5.04424 5.04772 5.10863 5.16119 5.23675 5.29001 5.43589 5.47727 5.55445 5.61908 5.69878 6.07802 6.12124 6.30911 6.40053 6.63879 7.13230 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.247 4.247 5 C 0.193 3.807 6 O -0.272 6.272 7 C 0.036 3.964 8 C 0.517 3.483 9 O -0.507 6.507 10 N -0.718 5.718 11 C 0.125 3.875 12 H 0.119 0.881 13 C -0.135 4.135 14 C -0.071 4.071 15 H 0.103 0.897 16 C -0.070 4.070 17 C -0.118 4.118 18 C -0.118 4.118 19 C -0.124 4.124 20 C -0.117 4.117 21 C -0.116 4.116 22 C -0.145 4.145 23 C -0.181 4.181 24 C -0.059 4.059 25 O -0.521 6.521 26 Si 0.686 3.314 27 C -0.043 4.043 28 C -0.239 4.239 29 H 0.060 0.940 30 H 0.058 0.942 31 H 0.103 0.897 32 H 0.138 0.862 33 H 0.096 0.904 34 H 0.095 0.905 35 H 0.402 0.598 36 H 0.080 0.920 37 H 0.090 0.910 38 H 0.120 0.880 39 H 0.122 0.878 40 H 0.121 0.879 41 H 0.122 0.878 42 H 0.122 0.878 43 H 0.090 0.910 44 H 0.077 0.923 45 H 0.118 0.882 46 H 0.369 0.631 47 H -0.257 1.257 48 H -0.261 1.261 49 H 0.138 0.862 50 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.305 -5.685 1.850 6.831 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.267 4.267 5 C 0.146 3.854 6 O -0.183 6.183 7 C -0.043 4.043 8 C 0.301 3.699 9 O -0.381 6.381 10 N -0.371 5.371 11 C 0.020 3.980 12 H 0.137 0.863 13 C -0.173 4.173 14 C -0.090 4.090 15 H 0.122 0.878 16 C -0.070 4.070 17 C -0.136 4.136 18 C -0.136 4.136 19 C -0.142 4.142 20 C -0.135 4.135 21 C -0.134 4.134 22 C -0.184 4.184 23 C -0.183 4.183 24 C -0.169 4.169 25 O -0.326 6.326 26 Si 0.588 3.412 27 C -0.060 4.060 28 C -0.258 4.258 29 H 0.078 0.922 30 H 0.077 0.923 31 H 0.121 0.879 32 H 0.156 0.844 33 H 0.114 0.886 34 H 0.113 0.887 35 H 0.237 0.763 36 H 0.099 0.901 37 H 0.108 0.892 38 H 0.138 0.862 39 H 0.140 0.860 40 H 0.139 0.861 41 H 0.140 0.860 42 H 0.140 0.860 43 H 0.108 0.892 44 H 0.096 0.904 45 H 0.136 0.864 46 H 0.216 0.784 47 H -0.182 1.182 48 H -0.186 1.186 49 H 0.156 0.844 50 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -2.663 -4.081 1.952 5.249 hybrid contribution -0.346 -1.081 -1.281 1.711 sum -3.009 -5.162 0.671 6.013 Atomic orbital electron populations 1.23146 0.77606 1.04415 1.01778 1.86074 1.22017 1.26687 1.88002 1.18691 0.91459 0.84385 0.92642 1.20394 0.92925 0.97340 1.16018 1.18402 0.82004 0.92417 0.92573 1.86266 1.14706 1.29615 1.87698 1.22537 0.90400 0.87126 1.04205 1.20037 0.87334 0.85761 0.76742 1.90802 1.79720 1.20824 1.46718 1.45808 1.06206 1.09015 1.76114 1.22579 0.77856 1.00408 0.97130 0.86274 1.23459 0.96102 0.98759 0.98975 1.21328 0.96040 0.95140 0.96465 0.87847 1.19634 0.93509 0.95450 0.98394 1.20979 0.99608 0.94142 0.98865 1.21166 0.95360 0.97496 0.99571 1.21204 0.93884 0.99439 0.99682 1.21198 0.99984 0.94256 0.98089 1.21092 0.94536 0.97785 0.99944 1.23627 0.95896 1.01831 0.97033 1.19507 0.92729 0.94383 1.11654 1.24821 1.05962 0.97761 0.88385 1.86705 1.36919 1.92754 1.16252 0.95202 0.77614 0.78176 0.90224 1.20781 0.92695 0.97883 0.94685 1.21118 1.00434 0.91772 1.12486 0.92160 0.92306 0.87886 0.84419 0.88578 0.88703 0.76327 0.90126 0.89183 0.86201 0.86046 0.86069 0.85976 0.86003 0.89184 0.90412 0.86446 0.78408 1.18187 1.18631 0.84442 0.84785 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.32 -0.29 10.49 -19.42 -0.20 -0.49 16 3 C 0.17 0.22 6.68 -39.24 -0.26 -0.04 16 4 C -0.25 -0.31 8.97 -39.29 -0.35 -0.66 16 5 C 0.19 0.48 6.66 -39.24 -0.26 0.21 16 6 O -0.27 -0.96 8.99 -39.35 -0.35 -1.31 16 7 C 0.04 -0.01 5.22 36.00 0.19 0.18 16 8 C 0.52 0.97 7.91 -10.99 -0.09 0.88 16 9 O -0.51 -3.53 16.10 -14.36 -0.23 -3.76 16 10 N -0.72 0.99 5.35 -53.02 -0.28 0.70 16 11 C 0.12 -0.09 4.24 -67.12 -0.28 -0.38 16 12 H 0.12 0.13 7.46 -51.93 -0.39 -0.26 16 13 C -0.13 0.28 7.30 -25.92 -0.19 0.10 16 14 C -0.07 0.09 3.98 -90.96 -0.36 -0.28 16 15 H 0.10 -0.16 8.09 -51.93 -0.42 -0.58 16 16 C -0.07 -0.01 5.29 -104.62 -0.55 -0.56 16 17 C -0.12 0.02 8.60 -39.58 -0.34 -0.32 16 18 C -0.12 -0.02 10.05 -39.59 -0.40 -0.42 16 19 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 20 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 21 C -0.12 -0.05 9.71 -39.58 -0.38 -0.43 16 22 C -0.15 0.12 7.25 -25.92 -0.19 -0.07 16 23 C -0.18 -0.35 5.27 -104.45 -0.55 -0.90 16 24 C -0.06 -0.14 2.38 36.01 0.09 -0.05 16 25 O -0.52 -2.15 12.88 -35.23 -0.45 -2.60 16 26 Si 0.69 0.22 30.24 -169.99 -5.14 -4.93 16 27 C -0.04 -0.02 8.65 -39.63 -0.34 -0.36 16 28 C -0.24 -0.05 9.04 -39.41 -0.36 -0.40 16 29 H 0.06 -0.20 7.66 -51.93 -0.40 -0.60 16 30 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 31 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 32 H 0.14 -0.10 6.30 -52.49 -0.33 -0.43 16 33 H 0.10 -0.27 7.66 -51.93 -0.40 -0.67 16 34 H 0.10 -0.22 7.66 -51.93 -0.40 -0.62 16 35 H 0.40 -1.81 8.73 -40.82 -0.36 -2.17 16 36 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.09 -0.25 7.69 -51.93 -0.40 -0.65 16 38 H 0.12 -0.22 6.67 -52.49 -0.35 -0.57 16 39 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 40 H 0.12 -0.14 8.06 -52.48 -0.42 -0.56 16 41 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 42 H 0.12 -0.12 8.05 -52.49 -0.42 -0.54 16 43 H 0.09 -0.12 6.32 -51.93 -0.33 -0.45 16 44 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 45 H 0.12 0.38 7.82 -51.93 -0.41 -0.03 16 46 H 0.37 0.24 8.70 45.56 0.40 0.63 16 47 H -0.26 -0.97 7.11 56.52 0.40 -0.57 16 48 H -0.26 -0.33 6.68 56.52 0.38 0.05 16 49 H 0.14 -0.18 4.85 -52.49 -0.25 -0.43 16 50 H 0.13 -0.26 6.29 -52.48 -0.33 -0.59 16 LS Contribution 411.17 15.07 6.20 6.20 Total: 0.00 -10.40 411.17 -11.85 -22.25 By element: Atomic # 1 Polarization: -5.65 SS G_CDS: -6.94 Total: -12.59 kcal Atomic # 6 Polarization: 0.97 SS G_CDS: -4.44 Total: -3.47 kcal Atomic # 7 Polarization: 0.99 SS G_CDS: -0.28 Total: 0.70 kcal Atomic # 8 Polarization: -6.92 SS G_CDS: -1.24 Total: -8.17 kcal Atomic # 14 Polarization: 0.22 SS G_CDS: -5.14 Total: -4.93 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -10.40 -11.85 -22.25 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_4974312.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.027 kcal (2) G-P(sol) polarization free energy of solvation -10.395 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.422 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.853 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.248 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.275 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds