Wall clock time and date at job start Sun Mar 7 2021 08:58:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35898 * 117.00023 * 2 1 4 4 C 1.38616 * 120.02625 * 180.02562 * 3 2 1 5 5 C 1.38656 * 119.88679 * 180.30091 * 4 3 2 6 6 O 1.35904 * 120.02297 * 179.69487 * 5 4 3 7 7 C 1.42900 * 117.00140 * 0.02562 * 6 5 4 8 8 C 1.50694 * 109.47262 * 179.97438 * 7 6 5 9 9 O 1.21285 * 119.99594 * 0.02562 * 8 7 6 10 10 N 1.34770 * 120.00346 * 179.97438 * 8 7 6 11 11 C 1.46505 * 120.00262 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.84854 * 23.81096 * 11 10 8 13 13 C 1.53780 * 113.61226 * 155.00328 * 11 10 8 14 14 C 1.53774 * 87.07954 * 139.98435 * 13 11 10 15 15 H 1.08997 * 113.62057 * 89.19817 * 14 13 11 16 16 C 1.50704 * 113.61453 * 220.01879 * 14 13 11 17 17 C 1.38233 * 120.00185 * 59.72197 * 16 14 13 18 18 C 1.38234 * 119.99988 * 179.76508 * 17 16 14 19 19 C 1.38231 * 120.00057 * 0.48842 * 18 17 16 20 20 C 1.38242 * 119.99987 * 359.79168 * 19 18 17 21 21 C 1.38232 * 119.99872 * 359.95408 * 20 19 18 22 22 C 1.53778 * 113.61469 * 252.50204 * 11 10 8 23 23 C 1.38746 * 119.94590 * 359.44605 * 5 4 3 24 24 C 1.50705 * 119.97375 * 180.27993 * 23 5 4 25 25 O 1.42900 * 109.47309 * 75.27139 * 24 23 5 26 26 Si 1.86301 * 109.47349 * 195.27376 * 24 23 5 27 27 C 1.38193 * 120.05728 * 0.55004 * 23 5 4 28 28 C 1.38157 * 120.10557 * 359.72907 * 27 23 5 29 29 H 1.09002 * 109.47191 * 299.99582 * 1 2 3 30 30 H 1.09001 * 109.47001 * 59.99872 * 1 2 3 31 31 H 1.08998 * 109.47037 * 180.02562 * 1 2 3 32 32 H 1.08002 * 120.05254 * 0.02562 * 4 3 2 33 33 H 1.09004 * 109.47231 * 299.99964 * 7 6 5 34 34 H 1.09006 * 109.46942 * 59.99962 * 7 6 5 35 35 H 0.97005 * 119.99776 * 0.02562 * 10 8 7 36 36 H 1.09000 * 113.61296 * 254.52828 * 13 11 10 37 37 H 1.08997 * 113.61813 * 25.43473 * 13 11 10 38 38 H 1.07998 * 119.99517 * 0.02562 * 17 16 14 39 39 H 1.08002 * 119.99887 * 180.25506 * 18 17 16 40 40 H 1.08003 * 120.00064 * 179.76496 * 19 18 17 41 41 H 1.07997 * 119.99756 * 179.97438 * 20 19 18 42 42 H 1.07995 * 120.00042 * 180.02562 * 21 20 19 43 43 H 1.09000 * 113.61283 * 334.56601 * 22 11 10 44 44 H 1.08997 * 113.61601 * 105.47571 * 22 11 10 45 45 H 1.08997 * 109.46616 * 315.27685 * 24 23 5 46 46 H 0.96708 * 113.99822 * 60.00201 * 25 24 23 47 47 H 1.48500 * 110.00057 * 179.97438 * 26 24 23 48 48 H 1.48504 * 109.99853 * 301.31944 * 26 24 23 49 49 H 1.08002 * 119.94997 * 179.74560 * 27 23 5 50 50 H 1.08003 * 119.97248 * 179.97438 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4302 1.2840 -0.0005 5 6 4.0567 2.5210 0.0058 6 8 5.4136 2.5959 0.0115 7 6 6.1316 1.3604 0.0101 8 6 7.6124 1.6399 0.0165 9 8 8.0134 2.7846 0.0221 10 7 8.4911 0.6181 0.0169 11 6 9.9307 0.8899 0.0236 12 1 10.1745 1.8701 0.4332 13 6 10.7705 -0.2526 0.6189 14 6 11.7894 0.0185 -0.5005 15 1 12.5431 0.7596 -0.2349 16 6 12.3832 -1.2337 -1.0926 17 6 11.5624 -2.1734 -1.6878 18 6 12.1076 -3.3197 -2.2352 19 6 13.4725 -3.5311 -2.1784 20 6 14.2927 -2.5942 -1.5780 21 6 13.7480 -1.4454 -1.0353 22 6 10.6201 0.5920 -1.3183 23 6 3.2971 3.6821 0.0010 24 6 3.9774 5.0268 0.0015 25 8 4.5032 5.2952 -1.2999 26 14 2.7441 6.3466 0.4573 27 6 1.9173 3.6065 0.0014 28 6 1.2907 2.3752 0.0010 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0276 0.0005 32 1 4.0196 0.3791 -0.0014 33 1 5.8664 0.7850 0.8971 34 1 5.8735 0.7912 -0.8829 35 1 8.1704 -0.2974 0.0127 36 1 11.1520 -0.0395 1.6175 37 1 10.2923 -1.2294 0.5469 38 1 10.4957 -2.0098 -1.7289 39 1 11.4668 -4.0518 -2.7039 40 1 13.8980 -4.4285 -2.6027 41 1 15.3590 -2.7596 -1.5333 42 1 14.3888 -0.7133 -0.5666 43 1 10.1007 -0.1539 -1.9199 44 1 10.8803 1.4869 -1.8836 45 1 4.7902 5.0225 0.7278 46 1 3.8343 5.3141 -1.9981 47 1 3.4028 7.6775 0.4619 48 1 1.6150 6.3415 -0.5072 49 1 1.3277 4.5114 0.0019 50 1 0.2121 2.3187 0.0017 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16147626_4974312.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:27 Heat of formation + Delta-G solvation = -50.139110 kcal Electronic energy + Delta-G solvation = -32279.719060 eV Core-core repulsion = 27819.545870 eV Total energy + Delta-G solvation = -4460.173191 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -41.88379 -41.43535 -40.52055 -39.81066 -38.77196 -38.25689 -37.00782 -34.87039 -32.32395 -31.97868 -31.74509 -31.30450 -29.46899 -28.35603 -26.73036 -26.13678 -25.90972 -23.83343 -23.54844 -22.52473 -22.41094 -21.68185 -20.37767 -19.97345 -18.59751 -18.25344 -18.08794 -17.73713 -17.53312 -17.21265 -16.89548 -16.66879 -16.49306 -16.41433 -16.05462 -15.94962 -15.58015 -15.45653 -15.24351 -15.16058 -14.74604 -14.50899 -14.30425 -14.19546 -13.96011 -13.76317 -13.51507 -13.47503 -13.34234 -13.15631 -13.12953 -12.56942 -12.47789 -12.32400 -12.30066 -12.03580 -11.82904 -11.67943 -11.66083 -11.62972 -11.47881 -10.97240 -10.51730 -10.16454 -9.81546 -9.70654 -9.55281 -9.10901 -4.93153 0.19618 0.30298 0.43010 0.50381 1.31498 1.40079 1.44811 1.55537 1.96111 2.24843 2.55702 2.58855 2.83634 3.42263 3.49249 3.51429 3.65814 3.71543 3.71984 3.80088 3.90812 3.94103 4.03424 4.05322 4.06322 4.13862 4.16661 4.17849 4.29457 4.34442 4.40268 4.42502 4.46116 4.54317 4.61977 4.65786 4.67784 4.72015 4.79059 4.81839 4.94542 4.99906 5.01943 5.08838 5.16114 5.19919 5.23144 5.27431 5.45590 5.49852 5.58935 5.64762 5.73479 6.12657 6.12909 6.35528 6.44042 6.57062 7.09982 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.330 6.330 3 C 0.165 3.835 4 C -0.252 4.252 5 C 0.177 3.823 6 O -0.303 6.303 7 C 0.034 3.966 8 C 0.514 3.486 9 O -0.569 6.569 10 N -0.699 5.699 11 C 0.120 3.880 12 H 0.096 0.904 13 C -0.120 4.120 14 C -0.068 4.068 15 H 0.103 0.897 16 C -0.077 4.077 17 C -0.124 4.124 18 C -0.128 4.128 19 C -0.138 4.138 20 C -0.131 4.131 21 C -0.131 4.131 22 C -0.142 4.142 23 C -0.196 4.196 24 C -0.078 4.078 25 O -0.550 6.550 26 Si 0.781 3.219 27 C -0.041 4.041 28 C -0.238 4.238 29 H 0.070 0.930 30 H 0.066 0.934 31 H 0.116 0.884 32 H 0.154 0.846 33 H 0.125 0.875 34 H 0.119 0.881 35 H 0.421 0.579 36 H 0.083 0.917 37 H 0.105 0.895 38 H 0.137 0.863 39 H 0.136 0.864 40 H 0.132 0.868 41 H 0.132 0.868 42 H 0.130 0.870 43 H 0.099 0.901 44 H 0.062 0.938 45 H 0.097 0.903 46 H 0.381 0.619 47 H -0.308 1.308 48 H -0.262 1.262 49 H 0.156 0.844 50 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.231 -7.437 2.020 9.314 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.243 6.243 3 C 0.118 3.882 4 C -0.271 4.271 5 C 0.130 3.870 6 O -0.215 6.215 7 C -0.044 4.044 8 C 0.300 3.700 9 O -0.447 6.447 10 N -0.352 5.352 11 C 0.016 3.984 12 H 0.114 0.886 13 C -0.158 4.158 14 C -0.087 4.087 15 H 0.121 0.879 16 C -0.077 4.077 17 C -0.142 4.142 18 C -0.146 4.146 19 C -0.156 4.156 20 C -0.149 4.149 21 C -0.149 4.149 22 C -0.181 4.181 23 C -0.197 4.197 24 C -0.186 4.186 25 O -0.357 6.357 26 Si 0.685 3.315 27 C -0.059 4.059 28 C -0.256 4.256 29 H 0.089 0.911 30 H 0.085 0.915 31 H 0.135 0.865 32 H 0.171 0.829 33 H 0.143 0.857 34 H 0.137 0.863 35 H 0.259 0.741 36 H 0.102 0.898 37 H 0.123 0.877 38 H 0.155 0.845 39 H 0.154 0.846 40 H 0.150 0.850 41 H 0.150 0.850 42 H 0.147 0.853 43 H 0.118 0.882 44 H 0.080 0.920 45 H 0.115 0.885 46 H 0.230 0.770 47 H -0.237 1.237 48 H -0.188 1.188 49 H 0.173 0.827 50 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -4.596 -5.929 2.117 7.795 hybrid contribution 0.303 -0.594 -1.358 1.513 sum -4.292 -6.524 0.759 7.846 Atomic orbital electron populations 1.23403 0.76005 1.05709 1.02687 1.86054 1.23751 1.26566 1.87925 1.18869 0.91652 0.84973 0.92668 1.20557 0.93410 0.97413 1.15709 1.18589 0.81725 0.93183 0.93467 1.86225 1.15524 1.31680 1.88109 1.22755 0.88484 0.86496 1.06635 1.20510 0.88559 0.85288 0.75610 1.90776 1.80755 1.23284 1.49909 1.45678 1.05688 1.09435 1.74422 1.22505 0.78293 1.00094 0.97554 0.88586 1.23395 0.95089 0.98610 0.98704 1.21301 0.96013 0.94767 0.96646 0.87874 1.19785 0.93558 0.95828 0.98512 1.21219 1.00524 0.93938 0.98529 1.21441 0.95573 0.98003 0.99609 1.21458 0.94294 0.99958 0.99880 1.21425 1.00725 0.94437 0.98278 1.21318 0.95065 0.98177 1.00332 1.23610 0.96206 1.01440 0.96843 1.19603 0.93521 0.93953 1.12602 1.25163 1.06286 0.99772 0.87332 1.86654 1.38556 1.93055 1.17469 0.94112 0.75470 0.73351 0.88583 1.20946 0.92000 0.98822 0.94098 1.21399 1.01615 0.91239 1.11375 0.91099 0.91493 0.86544 0.82881 0.85729 0.86316 0.74122 0.89810 0.87711 0.84529 0.84601 0.84988 0.85016 0.85252 0.88244 0.91953 0.88485 0.77023 1.23685 1.18788 0.82702 0.82517 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.19 10.49 -92.40 -0.97 -1.16 16 3 C 0.16 0.26 6.68 22.49 0.15 0.41 16 4 C -0.25 -0.54 8.97 22.46 0.20 -0.34 16 5 C 0.18 1.01 6.66 22.49 0.15 1.16 16 6 O -0.30 -2.62 8.99 -73.43 -0.66 -3.28 16 7 C 0.03 0.00 5.22 71.23 0.37 0.37 16 8 C 0.51 2.56 7.91 87.66 0.69 3.26 16 9 O -0.57 -9.60 16.10 15.99 0.26 -9.35 16 10 N -0.70 1.83 5.35 -440.05 -2.36 -0.53 16 11 C 0.12 -0.08 4.24 45.51 0.19 0.11 16 12 H 0.10 0.44 7.46 -2.39 -0.02 0.42 16 13 C -0.12 0.55 7.30 31.12 0.23 0.77 16 14 C -0.07 0.14 3.98 -11.01 -0.04 0.10 16 15 H 0.10 -0.22 8.09 -2.39 -0.02 -0.24 16 16 C -0.08 -0.01 5.29 -19.86 -0.11 -0.12 16 17 C -0.12 0.11 8.60 22.27 0.19 0.30 16 18 C -0.13 0.02 10.05 22.27 0.22 0.25 16 19 C -0.14 -0.11 10.05 22.27 0.22 0.11 16 20 C -0.13 -0.16 10.05 22.27 0.22 0.06 16 21 C -0.13 -0.17 9.71 22.27 0.22 0.05 16 22 C -0.14 0.14 7.25 31.12 0.23 0.37 16 23 C -0.20 -0.89 5.27 -19.75 -0.10 -0.99 16 24 C -0.08 -0.50 2.38 71.24 0.17 -0.33 16 25 O -0.55 -5.70 12.88 -148.98 -1.92 -7.62 16 26 Si 0.78 0.72 30.24 68.60 2.07 2.80 16 27 C -0.04 0.00 8.65 22.24 0.19 0.20 16 28 C -0.24 0.24 9.04 22.38 0.20 0.44 16 29 H 0.07 -0.61 7.66 -2.39 -0.02 -0.63 16 30 H 0.07 -0.54 7.66 -2.39 -0.02 -0.56 16 31 H 0.12 -1.11 8.14 -2.39 -0.02 -1.13 16 32 H 0.15 -0.36 6.30 -2.91 -0.02 -0.38 16 33 H 0.13 -0.80 7.66 -2.39 -0.02 -0.81 16 34 H 0.12 -0.64 7.66 -2.38 -0.02 -0.66 16 35 H 0.42 -4.30 8.73 -92.70 -0.81 -5.11 16 36 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 37 H 0.10 -0.76 7.69 -2.39 -0.02 -0.78 16 38 H 0.14 -0.70 6.67 -2.91 -0.02 -0.72 16 39 H 0.14 -0.53 8.06 -2.91 -0.02 -0.55 16 40 H 0.13 -0.31 8.06 -2.91 -0.02 -0.33 16 41 H 0.13 -0.23 8.06 -2.91 -0.02 -0.26 16 42 H 0.13 -0.17 8.05 -2.91 -0.02 -0.19 16 43 H 0.10 -0.30 6.32 -2.39 -0.02 -0.31 16 44 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 45 H 0.10 0.93 7.82 -2.39 -0.02 0.91 16 46 H 0.38 1.07 8.70 -74.05 -0.64 0.42 16 47 H -0.31 -2.90 7.11 99.48 0.71 -2.19 16 48 H -0.26 -0.28 6.68 99.48 0.66 0.38 16 49 H 0.16 -0.66 4.85 -2.91 -0.01 -0.67 16 50 H 0.16 -0.97 6.29 -2.91 -0.02 -0.99 16 Total: 0.00 -27.27 411.17 0.68 -26.60 By element: Atomic # 1 Polarization: -14.18 SS G_CDS: -0.47 Total: -14.65 kcal Atomic # 6 Polarization: 2.48 SS G_CDS: 4.71 Total: 7.19 kcal Atomic # 7 Polarization: 1.83 SS G_CDS: -2.36 Total: -0.53 kcal Atomic # 8 Polarization: -18.12 SS G_CDS: -3.29 Total: -21.41 kcal Atomic # 14 Polarization: 0.72 SS G_CDS: 2.07 Total: 2.80 kcal Total: -27.27 0.68 -26.60 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_4974312.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.541 kcal (2) G-P(sol) polarization free energy of solvation -27.273 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.814 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.675 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.598 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.139 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds