Wall clock time and date at job start Sun Mar 7 2021 08:58:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.37640 * 125.67252 * 2 1 4 4 C 1.46673 * 126.22818 * 359.97412 * 3 2 1 5 5 O 1.21692 * 119.99916 * 4.66236 * 4 3 2 6 6 N 1.34774 * 120.00162 * 184.65927 * 4 3 2 7 7 C 1.46503 * 120.00379 * 174.92655 * 6 4 3 8 8 H 1.08997 * 112.84433 * 23.80436 * 7 6 4 9 9 C 1.53773 * 113.61592 * 155.00077 * 7 6 4 10 10 C 1.53787 * 87.07969 * 139.98117 * 9 7 6 11 11 H 1.09003 * 113.61140 * 89.20198 * 10 9 7 12 12 C 1.50700 * 113.61356 * 220.01671 * 10 9 7 13 13 C 1.38236 * 119.99982 * 239.99720 * 12 10 9 14 14 C 1.38236 * 120.00115 * 180.02562 * 13 12 10 15 15 C 1.38234 * 119.99907 * 0.02562 * 14 13 12 16 16 C 1.38244 * 119.99802 * 359.97438 * 15 14 13 17 17 C 1.38227 * 120.00059 * 0.02562 * 16 15 14 18 18 C 1.53775 * 87.08057 * 334.56844 * 10 9 7 19 19 C 1.37893 * 107.54877 * 179.71288 * 3 2 1 20 20 C 1.39882 * 107.08861 * 0.26135 * 19 3 2 21 21 Br 1.89095 * 126.07289 * 180.02562 * 20 19 3 22 22 C 1.35506 * 107.85440 * 0.02562 * 20 19 3 23 23 C 1.50697 * 125.56985 * 179.97438 * 22 20 19 24 24 O 1.42902 * 109.47222 * 244.69487 * 23 22 20 25 25 Si 1.86298 * 109.46929 * 124.70032 * 23 22 20 26 26 H 1.08997 * 109.46840 * 84.41889 * 1 2 3 27 27 H 1.09003 * 109.46925 * 204.41818 * 1 2 3 28 28 H 1.09000 * 109.47219 * 324.41933 * 1 2 3 29 29 H 0.97003 * 119.99756 * 354.93415 * 6 4 3 30 30 H 1.08997 * 113.61631 * 25.43671 * 9 7 6 31 31 H 1.09001 * 113.69425 * 254.53825 * 9 7 6 32 32 H 1.07998 * 119.99981 * 359.97438 * 13 12 10 33 33 H 1.07994 * 120.00028 * 179.97438 * 14 13 12 34 34 H 1.07995 * 120.00518 * 179.69470 * 15 14 13 35 35 H 1.07998 * 119.99854 * 180.02562 * 16 15 14 36 36 H 1.08002 * 120.00021 * 180.02562 * 17 16 15 37 37 H 1.09001 * 113.61653 * 139.98286 * 18 10 9 38 38 H 1.09003 * 113.61338 * 270.88306 * 18 10 9 39 39 H 1.07990 * 126.45427 * 180.25952 * 19 3 2 40 40 H 1.08995 * 109.47280 * 4.69700 * 23 22 20 41 41 H 0.96695 * 114.00028 * 300.00349 * 24 23 22 42 42 H 1.48500 * 110.00137 * 184.98635 * 25 23 22 43 43 H 1.48505 * 110.00067 * 306.30286 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8120 2.5123 -0.0005 5 8 0.6246 2.7643 0.0846 6 7 2.7085 3.5142 -0.0953 7 6 2.2485 4.9006 -0.2078 8 1 1.2475 5.0485 0.1974 9 6 3.2738 5.9323 0.2911 10 6 2.8621 6.8041 -0.9070 11 1 2.0295 7.4744 -0.6936 12 6 4.0203 7.5027 -1.5715 13 6 4.0496 8.8832 -1.6365 14 6 5.1118 9.5240 -2.2465 15 6 6.1443 8.7843 -2.7920 16 6 6.1149 7.4037 -2.7270 17 6 5.0528 6.7630 -2.1170 18 6 2.4426 5.5022 -1.6097 19 6 3.5782 0.6892 0.0066 20 6 3.5530 -0.7094 0.0045 21 35 5.0610 -1.8502 0.0118 22 6 2.2559 -1.1015 -0.0038 23 6 1.7715 -2.5285 -0.0092 24 8 1.0802 -2.7922 -1.2317 25 14 0.6167 -2.7977 1.4277 26 1 -0.3633 0.0999 -1.0228 27 1 -0.3633 -0.9358 0.4248 28 1 -0.3634 0.8358 0.5979 29 1 3.6583 3.3174 -0.0890 30 1 4.3048 5.5820 0.2423 31 1 3.0206 6.3698 1.2568 32 1 3.2423 9.4611 -1.2114 33 1 5.1345 10.6025 -2.2976 34 1 6.9717 9.2847 -3.2729 35 1 6.9218 6.8258 -3.1528 36 1 5.0301 5.6844 -2.0659 37 1 1.5171 5.5916 -2.1786 38 1 3.2465 5.0343 -2.1781 39 1 4.4582 1.3151 0.0123 40 1 2.6240 -3.2019 0.0787 41 1 0.3082 -2.2283 -1.3765 42 1 0.2266 -4.2285 1.5046 43 1 1.2743 -2.3819 2.6926 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16147626_5000100.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:30 Heat of formation + Delta-G solvation = 45.415641 kcal Electronic energy + Delta-G solvation = -27205.445034 eV Core-core repulsion = 23265.299638 eV Total energy + Delta-G solvation = -3940.145396 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.057 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.90830 -41.34701 -40.07721 -38.62586 -37.87099 -35.15310 -34.27237 -32.36534 -31.79486 -31.50489 -30.89946 -27.49056 -27.34850 -26.67896 -25.60610 -23.60619 -23.33151 -22.31729 -21.53463 -20.90849 -20.13037 -18.90235 -18.22450 -17.98274 -17.30342 -17.08993 -16.67132 -16.43872 -16.06273 -15.95337 -15.69741 -15.32749 -15.25601 -14.71694 -14.41442 -14.36178 -14.29309 -14.26622 -14.13765 -13.93139 -13.70877 -13.42847 -13.22531 -13.13051 -12.93767 -12.51788 -12.36751 -12.28911 -11.94808 -11.79397 -11.65073 -11.43799 -11.30751 -11.05384 -10.82778 -10.15073 -9.82046 -9.79473 -9.52999 -9.30698 -5.23021 0.12792 0.45448 0.52484 0.60070 0.89887 1.16375 1.43018 1.52821 1.81203 2.15033 2.28078 2.86001 3.18180 3.41779 3.46151 3.53309 3.68932 3.74411 3.76434 3.89026 3.96381 4.07865 4.16580 4.21234 4.24670 4.31112 4.31584 4.40032 4.57106 4.61466 4.63947 4.68739 4.74890 4.77115 4.85857 4.99175 5.04895 5.12123 5.18828 5.22787 5.23966 5.51874 5.56121 5.61227 5.66917 5.76364 5.81497 6.14910 6.41553 6.45844 7.05326 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.053 3.947 2 N -0.395 5.395 3 C -0.043 4.043 4 C 0.594 3.406 5 O -0.569 6.569 6 N -0.695 5.695 7 C 0.125 3.875 8 H 0.109 0.891 9 C -0.125 4.125 10 C -0.067 4.067 11 H 0.108 0.892 12 C -0.076 4.076 13 C -0.130 4.130 14 C -0.131 4.131 15 C -0.139 4.139 16 C -0.130 4.130 17 C -0.125 4.125 18 C -0.141 4.141 19 C -0.107 4.107 20 C -0.182 4.182 21 Br -0.028 7.028 22 C 0.047 3.953 23 C -0.055 4.055 24 O -0.539 6.539 25 Si 0.752 3.248 26 H 0.111 0.889 27 H 0.109 0.891 28 H 0.109 0.891 29 H 0.415 0.585 30 H 0.098 0.902 31 H 0.084 0.916 32 H 0.132 0.868 33 H 0.132 0.868 34 H 0.131 0.869 35 H 0.134 0.866 36 H 0.135 0.865 37 H 0.069 0.931 38 H 0.094 0.906 39 H 0.176 0.824 40 H 0.125 0.875 41 H 0.390 0.610 42 H -0.268 1.268 43 H -0.285 1.285 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.435 3.100 0.039 3.416 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 N -0.068 5.068 3 C -0.157 4.157 4 C 0.382 3.618 5 O -0.450 6.450 6 N -0.345 5.345 7 C 0.021 3.979 8 H 0.126 0.874 9 C -0.164 4.164 10 C -0.086 4.086 11 H 0.126 0.874 12 C -0.076 4.076 13 C -0.148 4.148 14 C -0.149 4.149 15 C -0.157 4.157 16 C -0.148 4.148 17 C -0.143 4.143 18 C -0.179 4.179 19 C -0.134 4.134 20 C -0.268 4.268 21 Br 0.056 6.944 22 C -0.074 4.074 23 C -0.164 4.164 24 O -0.346 6.346 25 Si 0.654 3.346 26 H 0.129 0.871 27 H 0.126 0.874 28 H 0.128 0.872 29 H 0.253 0.747 30 H 0.116 0.884 31 H 0.102 0.898 32 H 0.150 0.850 33 H 0.150 0.850 34 H 0.149 0.851 35 H 0.151 0.849 36 H 0.153 0.847 37 H 0.088 0.912 38 H 0.113 0.887 39 H 0.194 0.806 40 H 0.142 0.858 41 H 0.240 0.760 42 H -0.194 1.194 43 H -0.211 1.211 Dipole moment (debyes) X Y Z Total from point charges -1.803 2.054 0.769 2.839 hybrid contribution 1.060 0.196 -0.265 1.110 sum -0.742 2.250 0.505 2.423 Atomic orbital electron populations 1.22781 0.73714 1.05391 1.06660 1.43909 1.07928 1.03544 1.51463 1.20081 0.89965 0.87849 1.17849 1.16926 0.85614 0.83547 0.75745 1.90799 1.17188 1.85019 1.51999 1.45571 1.10045 1.05615 1.73293 1.22565 0.99781 0.78421 0.97147 0.87352 1.23415 0.99674 0.94782 0.98480 1.21311 0.96055 0.95144 0.96099 0.87429 1.19811 0.95900 0.93549 0.98385 1.21328 0.99071 0.94436 0.99930 1.21426 0.94416 1.00796 0.98273 1.21445 0.99316 0.94671 1.00256 1.21433 0.98938 0.94964 0.99461 1.21217 0.93884 1.00609 0.98549 1.23602 1.02488 0.95185 0.96671 1.21498 0.95909 0.92731 1.03259 1.20994 0.91427 0.95013 1.19331 1.96657 1.36127 1.63389 1.98249 1.20848 0.89896 0.90303 1.06402 1.24969 1.03192 0.89992 0.98291 1.86591 1.46216 1.63040 1.38781 0.94394 0.84522 0.82295 0.73407 0.87119 0.87373 0.87229 0.74727 0.88354 0.89756 0.85019 0.85029 0.85143 0.84854 0.84699 0.91176 0.88730 0.80638 0.85782 0.75981 1.19399 1.21111 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.33 8.94 127.77 1.14 0.81 16 2 N -0.40 0.03 3.10 -519.59 -1.61 -1.58 16 3 C -0.04 -0.06 6.89 40.35 0.28 0.22 16 4 C 0.59 1.08 7.77 86.45 0.67 1.75 16 5 O -0.57 -3.97 14.35 -4.32 -0.06 -4.03 16 6 N -0.69 2.44 5.34 -444.02 -2.37 0.07 16 7 C 0.13 -0.45 4.27 45.51 0.19 -0.26 16 8 H 0.11 -0.05 7.41 -2.39 -0.02 -0.07 16 9 C -0.13 0.74 7.30 31.12 0.23 0.96 16 10 C -0.07 0.28 3.98 -11.01 -0.04 0.24 16 11 H 0.11 -0.54 8.09 -2.39 -0.02 -0.56 16 12 C -0.08 0.07 5.29 -19.87 -0.11 -0.04 16 13 C -0.13 -0.03 9.71 22.27 0.22 0.19 16 14 C -0.13 -0.09 10.05 22.27 0.22 0.13 16 15 C -0.14 -0.10 10.05 22.27 0.22 0.13 16 16 C -0.13 0.01 10.05 22.27 0.22 0.23 16 17 C -0.12 0.14 8.61 22.27 0.19 0.33 16 18 C -0.14 0.53 7.25 31.12 0.23 0.75 16 19 C -0.11 -0.05 10.34 22.59 0.23 0.19 16 20 C -0.18 -0.67 6.53 22.04 0.14 -0.52 16 21 Br -0.03 -0.12 33.06 -20.37 -0.67 -0.79 16 22 C 0.05 0.09 5.30 41.34 0.22 0.31 16 23 C -0.05 -0.03 2.87 71.23 0.20 0.17 16 24 O -0.54 0.14 12.88 -148.98 -1.92 -1.78 16 25 Si 0.75 -1.34 29.23 68.60 2.01 0.67 16 26 H 0.11 -1.04 8.14 -2.39 -0.02 -1.06 16 27 H 0.11 -1.27 3.77 -2.39 -0.01 -1.28 16 28 H 0.11 -0.41 6.55 -2.39 -0.02 -0.43 16 29 H 0.42 -3.36 7.63 -92.71 -0.71 -4.07 16 30 H 0.10 -0.71 7.70 -2.39 -0.02 -0.72 16 31 H 0.08 -0.51 8.14 -2.39 -0.02 -0.52 16 32 H 0.13 -0.37 8.05 -2.91 -0.02 -0.39 16 33 H 0.13 -0.31 8.06 -2.91 -0.02 -0.33 16 34 H 0.13 -0.29 8.06 -2.91 -0.02 -0.31 16 35 H 0.13 -0.44 8.06 -2.91 -0.02 -0.46 16 36 H 0.14 -0.66 6.66 -2.91 -0.02 -0.68 16 37 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 38 H 0.09 -0.42 6.31 -2.39 -0.02 -0.43 16 39 H 0.18 -0.90 7.45 -2.92 -0.02 -0.92 16 40 H 0.12 0.35 6.95 -2.39 -0.02 0.33 16 41 H 0.39 -3.38 7.47 -74.06 -0.55 -3.94 16 42 H -0.27 -0.92 7.11 99.48 0.71 -0.21 16 43 H -0.28 -1.41 7.11 99.48 0.71 -0.71 16 Total: 0.00 -18.45 370.01 -0.31 -18.76 By element: Atomic # 1 Polarization: -16.76 SS G_CDS: -0.15 Total: -16.92 kcal Atomic # 6 Polarization: 1.14 SS G_CDS: 4.47 Total: 5.61 kcal Atomic # 7 Polarization: 2.47 SS G_CDS: -3.98 Total: -1.51 kcal Atomic # 8 Polarization: -3.83 SS G_CDS: -1.98 Total: -5.81 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: 2.01 Total: 0.67 kcal Atomic # 35 Polarization: -0.12 SS G_CDS: -0.67 Total: -0.79 kcal Total: -18.45 -0.31 -18.76 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_5000100.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.176 kcal (2) G-P(sol) polarization free energy of solvation -18.449 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.727 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.311 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.760 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.416 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds