Wall clock time and date at job start Sun Mar 7 2021 08:58:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35988 * 117.00050 * 2 1 4 4 C 1.39159 * 120.07398 * 180.02562 * 3 2 1 5 5 O 1.35990 * 120.07156 * 359.95861 * 4 3 2 6 6 C 1.42895 * 117.00021 * 179.97438 * 5 4 3 7 7 C 1.50707 * 109.47246 * 180.02562 * 6 5 4 8 8 O 1.21285 * 119.99735 * 359.97438 * 7 6 5 9 9 N 1.34775 * 119.99924 * 180.02562 * 7 6 5 10 10 C 1.46506 * 119.99679 * 179.97438 * 9 7 6 11 11 H 1.08995 * 112.85345 * 334.67307 * 10 9 7 12 12 C 1.53789 * 113.60826 * 105.86448 * 10 9 7 13 13 C 1.53953 * 87.01540 * 139.95261 * 12 10 9 14 14 H 1.09002 * 113.61752 * 89.19894 * 13 12 10 15 15 C 1.50705 * 113.66392 * 220.06766 * 13 12 10 16 16 C 1.38226 * 120.00243 * 37.28702 * 15 13 12 17 17 C 1.38238 * 120.00319 * 179.74501 * 16 15 13 18 18 C 1.38236 * 119.99366 * 0.52682 * 17 16 15 19 19 C 1.38232 * 120.00489 * 359.74901 * 18 17 16 20 20 C 1.38236 * 119.99595 * 217.55888 * 15 13 12 21 21 C 1.53782 * 113.61165 * 203.46835 * 10 9 7 22 22 C 1.38562 * 119.85457 * 179.97438 * 4 3 2 23 23 C 1.38246 * 119.99978 * 359.75019 * 22 4 3 24 24 C 1.38255 * 120.14603 * 0.50920 * 23 22 4 25 25 C 1.50699 * 119.92682 * 179.76682 * 24 23 22 26 26 O 1.42901 * 109.46830 * 119.72111 * 25 24 23 27 27 Si 1.86298 * 109.46950 * 359.72548 * 25 24 23 28 28 C 1.38241 * 120.14388 * 359.48603 * 24 23 22 29 29 H 1.08996 * 109.46870 * 300.00097 * 1 2 3 30 30 H 1.09001 * 109.47130 * 60.00141 * 1 2 3 31 31 H 1.08997 * 109.47260 * 179.97438 * 1 2 3 32 32 H 1.09002 * 109.47219 * 299.99627 * 6 5 4 33 33 H 1.08995 * 109.47486 * 60.00094 * 6 5 4 34 34 H 0.96998 * 120.00352 * 359.97438 * 9 7 6 35 35 H 1.09002 * 113.61383 * 254.52724 * 12 10 9 36 36 H 1.09000 * 113.61472 * 25.43220 * 12 10 9 37 37 H 1.08005 * 120.00012 * 0.02562 * 16 15 13 38 38 H 1.08002 * 120.00278 * 180.29471 * 17 16 15 39 39 H 1.08007 * 119.99551 * 179.76591 * 18 17 16 40 40 H 1.08001 * 120.00431 * 179.97438 * 19 18 17 41 41 H 1.08003 * 120.00514 * 0.02562 * 20 15 13 42 42 H 1.08992 * 113.61681 * 334.57124 * 21 10 9 43 43 H 1.09002 * 113.60909 * 105.47483 * 21 10 9 44 44 H 1.08002 * 120.00132 * 180.02562 * 22 4 3 45 45 H 1.08005 * 119.92689 * 180.25343 * 23 22 4 46 46 H 1.08991 * 109.47351 * 239.72258 * 25 24 23 47 47 H 0.96708 * 114.00246 * 299.99864 * 26 25 24 48 48 H 1.48506 * 109.99834 * 180.02562 * 27 25 24 49 49 H 1.48502 * 110.00011 * 301.31529 * 27 25 24 50 50 H 1.08001 * 119.99967 * 180.23686 * 28 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1795 0.1476 -0.0002 6 6 5.6003 0.3006 -0.0014 7 6 6.2519 -1.0583 -0.0015 8 8 5.5669 -2.0593 -0.0001 9 7 7.5957 -1.1613 -0.0019 10 6 8.2291 -2.4824 -0.0015 11 1 7.5936 -3.2563 0.4289 12 6 8.8421 -2.8720 -1.3570 13 6 10.0185 -3.4680 -0.5627 14 1 9.8741 -4.5125 -0.2862 15 6 11.3644 -3.2093 -1.1894 16 6 11.6172 -2.0000 -1.8093 17 6 12.8535 -1.7606 -2.3796 18 6 13.8333 -2.7349 -2.3395 19 6 13.5787 -3.9464 -1.7246 20 6 12.3443 -4.1836 -1.1493 21 6 9.6611 -2.4787 0.5591 22 6 4.0603 2.5233 -0.0011 23 6 3.3030 3.6798 -0.0063 24 6 1.9224 3.6057 -0.0004 25 6 1.1017 4.8696 -0.0008 26 8 0.2773 4.9017 -1.1675 27 14 2.2366 6.3470 -0.0015 28 6 1.2933 2.3748 0.0001 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0276 -0.0005 32 1 5.9059 0.8496 -0.8920 33 1 5.9072 0.8510 0.8879 34 1 8.1435 -0.3608 -0.0026 35 1 8.2605 -3.6157 -1.9017 36 1 9.1198 -2.0165 -1.9727 37 1 10.8503 -1.2403 -1.8441 38 1 13.0526 -0.8139 -2.8598 39 1 14.7980 -2.5493 -2.7884 40 1 14.3441 -4.7078 -1.6936 41 1 12.1452 -5.1303 -0.6692 42 1 10.1631 -1.5156 0.4682 43 1 9.7395 -2.9054 1.5591 44 1 5.1387 2.5839 -0.0019 45 1 3.7909 4.6434 -0.0108 46 1 0.4730 4.8949 0.8892 47 1 0.7711 4.8819 -1.9988 48 1 1.4394 7.5999 -0.0013 49 1 3.1214 6.3084 1.1906 50 1 0.2147 2.3196 0.0009 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_60476.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:34 Heat of formation + Delta-G solvation = -51.061561 kcal Electronic energy + Delta-G solvation = -31931.955348 eV Core-core repulsion = 27471.742157 eV Total energy + Delta-G solvation = -4460.213191 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -41.82622 -41.44511 -40.41258 -39.34857 -38.89477 -38.49054 -36.92004 -34.79092 -32.16986 -31.89114 -31.70580 -31.41780 -29.57946 -28.42833 -26.82651 -26.32607 -25.80506 -23.73845 -23.55473 -22.69685 -22.30998 -21.61702 -20.43977 -19.76928 -18.60341 -18.29488 -18.16431 -17.84732 -17.51669 -17.15292 -16.89370 -16.60005 -16.49288 -16.10469 -16.02254 -15.81854 -15.66237 -15.54278 -15.32113 -15.17216 -14.73132 -14.37132 -14.27657 -14.22851 -14.00456 -13.73389 -13.62745 -13.59251 -13.52978 -13.11626 -12.67675 -12.59719 -12.51109 -12.37963 -12.18214 -12.06522 -12.01174 -11.88084 -11.75284 -11.72869 -11.51661 -10.81465 -10.48096 -10.13899 -9.85104 -9.78469 -9.59253 -8.84713 -5.07445 0.17677 0.29742 0.39490 0.46846 1.25865 1.46385 1.50886 1.59431 1.93780 2.32272 2.55045 2.57500 2.79592 3.33801 3.40552 3.46681 3.58779 3.63442 3.63787 3.76522 3.79581 3.83083 3.92487 3.93890 3.96902 4.06568 4.10262 4.12560 4.20759 4.25995 4.29607 4.34770 4.48201 4.48789 4.54603 4.56924 4.58122 4.64353 4.65776 4.71830 4.86754 4.93727 4.99794 5.03175 5.09691 5.09886 5.14807 5.36826 5.43225 5.54285 5.55767 5.60839 5.68658 5.97195 6.06660 6.34422 6.53638 6.55405 7.12259 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.302 6.302 3 C 0.107 3.893 4 C 0.104 3.896 5 O -0.277 6.277 6 C 0.038 3.962 7 C 0.516 3.484 8 O -0.508 6.508 9 N -0.718 5.718 10 C 0.125 3.875 11 H 0.118 0.882 12 C -0.145 4.145 13 C -0.071 4.071 14 H 0.103 0.897 15 C -0.070 4.070 16 C -0.118 4.118 17 C -0.118 4.118 18 C -0.124 4.124 19 C -0.117 4.117 20 C -0.116 4.116 21 C -0.135 4.135 22 C -0.169 4.169 23 C -0.114 4.114 24 C -0.115 4.115 25 C -0.066 4.066 26 O -0.541 6.541 27 Si 0.691 3.309 28 C -0.146 4.146 29 H 0.055 0.945 30 H 0.057 0.943 31 H 0.103 0.897 32 H 0.095 0.905 33 H 0.094 0.906 34 H 0.402 0.598 35 H 0.077 0.923 36 H 0.090 0.910 37 H 0.120 0.880 38 H 0.122 0.878 39 H 0.121 0.879 40 H 0.122 0.878 41 H 0.122 0.878 42 H 0.090 0.910 43 H 0.080 0.920 44 H 0.139 0.861 45 H 0.132 0.868 46 H 0.113 0.887 47 H 0.380 0.620 48 H -0.255 1.255 49 H -0.258 1.258 50 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.940 3.289 -1.476 6.115 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.061 3.939 4 C 0.058 3.942 5 O -0.189 6.189 6 C -0.041 4.041 7 C 0.301 3.699 8 O -0.382 6.382 9 N -0.372 5.372 10 C 0.020 3.980 11 H 0.136 0.864 12 C -0.184 4.184 13 C -0.090 4.090 14 H 0.121 0.879 15 C -0.070 4.070 16 C -0.136 4.136 17 C -0.136 4.136 18 C -0.142 4.142 19 C -0.135 4.135 20 C -0.134 4.134 21 C -0.173 4.173 22 C -0.188 4.188 23 C -0.132 4.132 24 C -0.116 4.116 25 C -0.177 4.177 26 O -0.346 6.346 27 Si 0.593 3.407 28 C -0.165 4.165 29 H 0.074 0.926 30 H 0.076 0.924 31 H 0.121 0.879 32 H 0.112 0.888 33 H 0.112 0.888 34 H 0.237 0.763 35 H 0.096 0.904 36 H 0.108 0.892 37 H 0.138 0.862 38 H 0.140 0.860 39 H 0.139 0.861 40 H 0.140 0.860 41 H 0.140 0.860 42 H 0.108 0.892 43 H 0.099 0.901 44 H 0.157 0.843 45 H 0.149 0.851 46 H 0.131 0.869 47 H 0.227 0.773 48 H -0.180 1.180 49 H -0.182 1.182 50 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 4.190 2.892 -0.588 5.126 hybrid contribution 0.004 0.239 0.321 0.401 sum 4.194 3.132 -0.267 5.241 Atomic orbital electron populations 1.23132 0.78109 1.04409 1.01370 1.86249 1.21340 1.25345 1.88530 1.18285 0.89018 0.85564 1.01008 1.18283 0.88317 0.85782 1.01808 1.86280 1.16054 1.27725 1.88841 1.22497 0.81299 0.96367 1.03950 1.20066 0.82601 0.90524 0.76716 1.90798 1.62616 1.38033 1.46718 1.45813 1.05799 1.09402 1.76158 1.22577 0.92827 0.85368 0.97214 0.86377 1.23658 0.96190 1.01510 0.96999 1.21360 0.91254 1.00017 0.96353 0.87867 1.19627 0.94908 0.94201 0.98252 1.20979 0.97042 0.96882 0.98681 1.21169 0.93520 0.99331 0.99573 1.21205 0.99441 0.93897 0.99660 1.21200 0.97055 0.97334 0.97942 1.21096 0.93342 0.99039 0.99882 1.23449 0.94562 1.00196 0.99053 1.20989 1.00452 0.90688 1.06685 1.20686 0.92778 0.97845 1.01877 1.20040 0.93693 0.95205 1.02673 1.25035 0.99547 1.01851 0.91256 1.86499 1.35750 1.96938 1.15418 0.94697 0.80871 0.76547 0.88596 1.20933 1.00417 0.90398 1.04769 0.92623 0.92416 0.87864 0.88750 0.88826 0.76331 0.90395 0.89160 0.86181 0.86033 0.86068 0.85979 0.86014 0.89168 0.90136 0.84306 0.85069 0.86927 0.77312 1.17998 1.18246 0.84164 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.35 10.28 -34.20 -0.35 -1.70 16 3 C 0.11 0.36 6.70 -39.12 -0.26 0.10 16 4 C 0.10 0.28 6.70 -39.12 -0.26 0.02 16 5 O -0.28 -1.09 9.45 -47.33 -0.45 -1.53 16 6 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 7 C 0.52 0.82 7.91 -10.98 -0.09 0.73 16 8 O -0.51 -3.51 16.12 -14.36 -0.23 -3.74 16 9 N -0.72 1.30 5.36 -53.01 -0.28 1.01 16 10 C 0.12 -0.14 4.21 -67.11 -0.28 -0.42 16 11 H 0.12 0.10 7.50 -51.93 -0.39 -0.29 16 12 C -0.14 0.18 7.27 -25.82 -0.19 -0.01 16 13 C -0.07 0.11 3.98 -90.86 -0.36 -0.25 16 14 H 0.10 -0.19 8.09 -51.93 -0.42 -0.61 16 15 C -0.07 0.02 5.29 -104.62 -0.55 -0.54 16 16 C -0.12 0.06 8.63 -39.59 -0.34 -0.28 16 17 C -0.12 0.03 10.05 -39.58 -0.40 -0.37 16 18 C -0.12 -0.01 10.05 -39.58 -0.40 -0.41 16 19 C -0.12 -0.02 10.05 -39.58 -0.40 -0.42 16 20 C -0.12 -0.02 9.71 -39.58 -0.38 -0.40 16 21 C -0.13 0.33 7.30 -25.92 -0.19 0.14 16 22 C -0.17 0.06 9.04 -39.46 -0.36 -0.30 16 23 C -0.11 0.08 8.66 -39.57 -0.34 -0.27 16 24 C -0.12 -0.04 5.39 -104.61 -0.56 -0.60 16 25 C -0.07 0.02 2.82 36.01 0.10 0.13 16 26 O -0.54 -0.02 12.77 -35.23 -0.45 -0.47 16 27 Si 0.69 -1.01 29.78 -169.99 -5.06 -6.08 16 28 C -0.15 -0.23 8.60 -39.46 -0.34 -0.57 16 29 H 0.06 -0.03 7.66 -51.93 -0.40 -0.43 16 30 H 0.06 -0.04 7.66 -51.93 -0.40 -0.44 16 31 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 32 H 0.09 -0.34 7.66 -51.93 -0.40 -0.74 16 33 H 0.09 -0.32 7.66 -51.93 -0.40 -0.72 16 34 H 0.40 -2.05 8.71 -40.82 -0.36 -2.41 16 35 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 36 H 0.09 -0.16 6.31 -51.93 -0.33 -0.49 16 37 H 0.12 -0.28 6.65 -52.48 -0.35 -0.63 16 38 H 0.12 -0.23 8.06 -52.49 -0.42 -0.65 16 39 H 0.12 -0.17 8.06 -52.48 -0.42 -0.59 16 40 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 41 H 0.12 -0.15 8.05 -52.48 -0.42 -0.57 16 42 H 0.09 -0.29 7.70 -51.93 -0.40 -0.69 16 43 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 44 H 0.14 -0.49 6.30 -52.49 -0.33 -0.82 16 45 H 0.13 -0.38 4.87 -52.48 -0.26 -0.64 16 46 H 0.11 0.01 7.96 -51.93 -0.41 -0.41 16 47 H 0.38 -1.42 8.70 45.56 0.40 -1.03 16 48 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 49 H -0.26 -0.18 7.11 56.52 0.40 0.23 16 50 H 0.14 0.09 6.30 -52.49 -0.33 -0.24 16 LS Contribution 411.75 15.07 6.20 6.20 Total: 0.00 -11.27 411.75 -11.97 -23.24 By element: Atomic # 1 Polarization: -7.46 SS G_CDS: -6.92 Total: -14.39 kcal Atomic # 6 Polarization: 1.87 SS G_CDS: -4.43 Total: -2.56 kcal Atomic # 7 Polarization: 1.30 SS G_CDS: -0.28 Total: 1.01 kcal Atomic # 8 Polarization: -5.96 SS G_CDS: -1.48 Total: -7.44 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.06 Total: -6.08 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -11.27 -11.97 -23.24 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_60476.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.825 kcal (2) G-P(sol) polarization free energy of solvation -11.265 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.090 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.972 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.237 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.062 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds