Wall clock time and date at job start Sun Mar 7 2021 08:58:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86309 * 109.46925 * 2 1 4 4 C 1.50701 * 109.47376 * 119.99974 * 2 1 3 5 5 C 1.38235 * 119.94156 * 65.00205 * 4 2 1 6 6 C 1.38244 * 120.04562 * 179.97438 * 5 4 2 7 7 Br 1.89104 * 120.03256 * 180.02562 * 6 5 4 8 8 C 1.38785 * 119.92932 * 0.02562 * 6 5 4 9 9 O 1.35910 * 120.06134 * 180.02562 * 8 6 5 10 10 C 1.42898 * 117.00440 * 179.97438 * 9 8 6 11 11 C 1.50706 * 109.47423 * 180.02562 * 10 9 8 12 12 O 1.21281 * 119.99922 * 359.97438 * 11 10 9 13 13 N 1.34779 * 119.99749 * 179.97438 * 11 10 9 14 14 C 1.46494 * 119.99525 * 179.97438 * 13 11 10 15 15 H 1.09000 * 112.91148 * 23.75262 * 14 13 11 16 16 C 1.53786 * 113.61370 * 155.00031 * 14 13 11 17 17 C 1.53781 * 87.17350 * 140.02367 * 16 14 13 18 18 H 1.08999 * 113.61567 * 89.07405 * 17 16 14 19 19 C 1.50696 * 113.61615 * 219.89494 * 17 16 14 20 20 C 1.38238 * 119.99939 * 59.72569 * 19 17 16 21 21 C 1.38238 * 119.99688 * 179.81440 * 20 19 17 22 22 C 1.38232 * 120.00156 * 0.39502 * 21 20 19 23 23 C 1.38235 * 119.99992 * 359.85735 * 22 21 20 24 24 C 1.38231 * 119.99984 * 359.95888 * 23 22 21 25 25 C 1.53781 * 87.08070 * 334.52830 * 17 16 14 26 26 C 1.38724 * 119.88058 * 0.27624 * 8 6 5 27 27 C 1.38140 * 119.95524 * 359.45058 * 26 8 6 28 28 H 0.96698 * 114.00002 * 299.99882 * 1 2 3 29 29 H 1.08999 * 109.47493 * 240.00197 * 2 1 3 30 30 H 1.48497 * 110.00047 * 300.00017 * 3 2 1 31 31 H 1.48505 * 109.99572 * 61.31929 * 3 2 1 32 32 H 1.08005 * 119.97980 * 359.97438 * 5 4 2 33 33 H 1.09001 * 109.47167 * 60.00319 * 10 9 8 34 34 H 1.09005 * 109.47174 * 300.00246 * 10 9 8 35 35 H 0.97000 * 119.99938 * 359.97438 * 13 11 10 36 36 H 1.09002 * 113.61357 * 25.43283 * 16 14 13 37 37 H 1.09002 * 113.61608 * 254.61445 * 16 14 13 38 38 H 1.07997 * 119.99832 * 359.97438 * 20 19 17 39 39 H 1.08004 * 119.99549 * 180.23193 * 21 20 19 40 40 H 1.08004 * 119.99779 * 179.83991 * 22 21 20 41 41 H 1.07999 * 119.99761 * 179.97438 * 23 22 21 42 42 H 1.08006 * 120.00061 * 180.02562 * 24 23 22 43 43 H 1.09005 * 113.61471 * 139.98321 * 25 17 16 44 44 H 1.08996 * 113.61178 * 270.79663 * 25 17 16 45 45 H 1.08000 * 120.01896 * 179.70176 * 26 8 6 46 46 H 1.07999 * 119.96888 * 180.25145 * 27 26 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6842 -2.0602 1.3971 6 6 2.1445 -2.7141 2.5248 7 35 1.8067 -4.5608 2.7520 8 6 2.8548 -2.0139 3.4898 9 8 3.3090 -2.6542 4.5992 10 6 4.0329 -1.8706 5.5500 11 6 4.4542 -2.7436 6.7039 12 8 4.1627 -3.9209 6.7116 13 7 5.1548 -2.2161 7.7273 14 6 5.5638 -3.0646 8.8493 15 1 5.6241 -4.1199 8.5832 16 6 6.8050 -2.5453 9.5940 17 6 6.1065 -2.9686 10.8969 18 1 6.3148 -3.9977 11.1896 19 6 6.2926 -1.9896 12.0273 20 6 5.8557 -0.6852 11.8910 21 6 6.0230 0.2119 12.9294 22 6 6.6346 -0.1933 14.1010 23 6 7.0762 -1.4963 14.2353 24 6 6.9055 -2.3943 13.1984 25 6 4.7753 -2.7993 10.1458 26 6 3.0957 -0.6580 3.3225 27 6 2.6384 -0.0106 2.1911 28 1 -0.3933 0.4417 0.7650 29 1 1.7924 -0.5138 -0.8900 30 1 1.5614 2.4680 -1.2085 31 1 1.5878 2.4586 1.2243 32 1 1.1310 -2.6044 0.6458 33 1 3.3966 -1.0652 5.9167 34 1 4.9171 -1.4469 5.0737 35 1 5.3882 -1.2746 7.7209 36 1 6.9485 -1.4684 9.5054 37 1 7.7113 -3.1120 9.3804 38 1 5.3813 -0.3677 10.9742 39 1 5.6783 1.2300 12.8242 40 1 6.7676 0.5083 14.9113 41 1 7.5544 -1.8127 15.1505 42 1 7.2501 -3.4125 13.3035 43 1 4.0421 -3.5721 10.3770 44 1 4.3631 -1.7923 10.2094 45 1 3.6440 -0.1099 4.0744 46 1 2.8294 1.0441 2.0587 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16147626_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:36 Heat of formation + Delta-G solvation = -10.299984 kcal Electronic energy + Delta-G solvation = -29554.343440 eV Core-core repulsion = 25230.299612 eV Total energy + Delta-G solvation = -4324.043828 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -41.75783 -41.28625 -40.31207 -39.23417 -38.54019 -37.32129 -34.83539 -33.60339 -32.03972 -31.84259 -31.66286 -30.50409 -29.56612 -26.69427 -26.48256 -25.76723 -24.03441 -23.55802 -22.62979 -22.25161 -21.65236 -20.35613 -19.59448 -18.56072 -18.15844 -18.09249 -17.49435 -17.19015 -16.90976 -16.48347 -16.32901 -16.14653 -15.80731 -15.69220 -15.66542 -15.26410 -15.09218 -14.72193 -14.48665 -14.30873 -14.19307 -13.97047 -13.85046 -13.78338 -13.59221 -13.43838 -13.11476 -12.55597 -12.40461 -12.29190 -12.20667 -12.17312 -11.88703 -11.80508 -11.70048 -11.64096 -11.45482 -11.23447 -10.92851 -10.59710 -10.11824 -9.96601 -9.79784 -9.53333 -9.32837 -4.88709 -0.05078 0.12320 0.44852 0.52116 0.64576 1.33876 1.44076 1.45903 1.62085 2.01667 2.39360 2.53600 2.85520 3.41292 3.45115 3.50053 3.61072 3.67736 3.73467 3.76375 3.83432 3.94135 4.03832 4.06570 4.10963 4.12316 4.15938 4.20152 4.31134 4.33204 4.56173 4.58769 4.63939 4.65146 4.70513 4.74990 4.84703 4.85722 4.97260 5.00745 5.03012 5.11348 5.18441 5.22124 5.23921 5.47688 5.53432 5.60692 5.66589 5.75301 6.07426 6.14445 6.48009 6.50958 7.16031 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.085 4.085 3 Si 0.778 3.222 4 C -0.149 4.149 5 C -0.035 4.035 6 C -0.145 4.145 7 Br -0.056 7.056 8 C 0.149 3.851 9 O -0.306 6.306 10 C 0.032 3.968 11 C 0.512 3.488 12 O -0.570 6.570 13 N -0.698 5.698 14 C 0.121 3.879 15 H 0.094 0.906 16 C -0.120 4.120 17 C -0.070 4.070 18 H 0.100 0.900 19 C -0.076 4.076 20 C -0.123 4.123 21 C -0.128 4.128 22 C -0.139 4.139 23 C -0.132 4.132 24 C -0.132 4.132 25 C -0.141 4.141 26 C -0.189 4.189 27 C -0.056 4.056 28 H 0.387 0.613 29 H 0.122 0.878 30 H -0.309 1.309 31 H -0.269 1.269 32 H 0.136 0.864 33 H 0.131 0.869 34 H 0.134 0.866 35 H 0.422 0.578 36 H 0.106 0.894 37 H 0.081 0.919 38 H 0.140 0.860 39 H 0.137 0.863 40 H 0.131 0.869 41 H 0.130 0.870 42 H 0.128 0.872 43 H 0.061 0.939 44 H 0.101 0.899 45 H 0.180 0.820 46 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.808 9.409 2.444 11.324 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.193 4.193 3 Si 0.683 3.317 4 C -0.151 4.151 5 C -0.055 4.055 6 C -0.225 4.225 7 Br 0.030 6.970 8 C 0.101 3.899 9 O -0.218 6.218 10 C -0.046 4.046 11 C 0.298 3.702 12 O -0.448 6.448 13 N -0.352 5.352 14 C 0.016 3.984 15 H 0.113 0.887 16 C -0.158 4.158 17 C -0.089 4.089 18 H 0.119 0.881 19 C -0.076 4.076 20 C -0.141 4.141 21 C -0.146 4.146 22 C -0.157 4.157 23 C -0.150 4.150 24 C -0.150 4.150 25 C -0.180 4.180 26 C -0.208 4.208 27 C -0.073 4.073 28 H 0.236 0.764 29 H 0.140 0.860 30 H -0.237 1.237 31 H -0.195 1.195 32 H 0.154 0.846 33 H 0.148 0.852 34 H 0.152 0.848 35 H 0.260 0.740 36 H 0.125 0.875 37 H 0.100 0.900 38 H 0.158 0.842 39 H 0.155 0.845 40 H 0.149 0.851 41 H 0.148 0.852 42 H 0.146 0.854 43 H 0.079 0.921 44 H 0.119 0.881 45 H 0.197 0.803 46 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges 5.339 8.163 2.052 9.968 hybrid contribution -1.134 0.084 0.607 1.289 sum 4.205 8.247 2.658 9.632 Atomic orbital electron populations 1.86595 1.18684 1.80452 1.50190 1.25328 0.83377 1.12454 0.98133 0.94084 0.89861 0.71042 0.76760 1.20284 1.02570 0.93587 0.98634 1.20889 0.95737 0.94474 0.94386 1.21282 1.09813 0.91880 0.99512 1.96762 1.94969 1.07590 1.97722 1.18815 0.93223 0.91762 0.86085 1.86250 1.68622 1.37946 1.28997 1.22887 0.99713 0.93664 0.88315 1.20582 0.77852 0.87995 0.83777 1.90789 1.55629 1.18873 1.79537 1.45646 1.55507 1.14176 1.19836 1.22500 0.95956 0.95908 0.83993 0.88743 1.23393 0.96699 1.03064 0.92635 1.21299 0.97197 0.98513 0.91919 0.88134 1.19785 0.98256 0.94678 0.94904 1.21229 1.00249 0.92825 0.99760 1.21450 0.98977 1.00549 0.93606 1.21454 0.99036 0.96551 0.98629 1.21414 1.00093 0.94047 0.99408 1.21314 0.99797 1.00318 0.93587 1.23651 0.96478 1.03299 0.94563 1.21562 1.06056 0.91472 1.01686 1.21296 0.93568 1.00876 0.91604 0.76407 0.86035 1.23726 1.19547 0.84614 0.85167 0.84818 0.73958 0.87531 0.90030 0.84243 0.84516 0.85085 0.85177 0.85409 0.92053 0.88060 0.80270 0.81849 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.69 12.83 -148.98 -1.91 -2.60 16 2 C -0.08 0.24 2.80 71.24 0.20 0.44 16 3 Si 0.78 -4.52 29.88 68.60 2.05 -2.47 16 4 C -0.15 0.32 5.35 -19.85 -0.11 0.21 16 5 C -0.03 -0.09 9.42 22.27 0.21 0.12 16 6 C -0.14 -0.78 6.24 22.40 0.14 -0.64 16 7 Br -0.06 -0.53 33.16 -20.37 -0.68 -1.21 16 8 C 0.15 0.27 6.68 22.52 0.15 0.42 16 9 O -0.31 -1.28 9.00 -73.50 -0.66 -1.94 16 10 C 0.03 -0.19 5.22 71.24 0.37 0.19 16 11 C 0.51 0.46 7.91 87.66 0.69 1.15 16 12 O -0.57 -7.69 16.10 16.00 0.26 -7.43 16 13 N -0.70 4.36 5.36 -439.60 -2.36 2.00 16 14 C 0.12 -0.39 4.25 45.61 0.19 -0.19 16 15 H 0.09 0.24 7.47 -2.39 -0.02 0.22 16 16 C -0.12 0.79 7.29 31.12 0.23 1.02 16 17 C -0.07 0.26 3.98 -11.01 -0.04 0.22 16 18 H 0.10 -0.34 8.09 -2.39 -0.02 -0.36 16 19 C -0.08 0.10 5.29 -19.87 -0.11 0.00 16 20 C -0.12 0.34 8.60 22.27 0.19 0.53 16 21 C -0.13 0.22 10.05 22.27 0.22 0.44 16 22 C -0.14 0.04 10.05 22.27 0.22 0.26 16 23 C -0.13 -0.05 10.05 22.27 0.22 0.17 16 24 C -0.13 -0.03 9.71 22.27 0.22 0.18 16 25 C -0.14 0.46 7.27 31.21 0.23 0.69 16 26 C -0.19 1.15 9.04 22.36 0.20 1.35 16 27 C -0.06 0.36 8.66 22.26 0.19 0.55 16 28 H 0.39 -1.82 8.70 -74.06 -0.64 -2.46 16 29 H 0.12 -0.43 7.96 -2.39 -0.02 -0.45 16 30 H -0.31 -1.01 7.11 99.48 0.71 -0.30 16 31 H -0.27 1.08 7.00 99.48 0.70 1.78 16 32 H 0.14 0.41 8.06 -2.91 -0.02 0.39 16 33 H 0.13 -1.68 7.65 -2.39 -0.02 -1.70 16 34 H 0.13 -1.78 7.68 -2.38 -0.02 -1.80 16 35 H 0.42 -6.07 8.73 -92.71 -0.81 -6.88 16 36 H 0.11 -1.03 7.69 -2.39 -0.02 -1.05 16 37 H 0.08 -0.50 8.14 -2.39 -0.02 -0.52 16 38 H 0.14 -1.05 6.68 -2.91 -0.02 -1.07 16 39 H 0.14 -0.76 8.06 -2.91 -0.02 -0.78 16 40 H 0.13 -0.43 8.06 -2.91 -0.02 -0.45 16 41 H 0.13 -0.31 8.06 -2.91 -0.02 -0.33 16 42 H 0.13 -0.26 8.06 -2.91 -0.02 -0.29 16 43 H 0.06 0.02 8.14 -2.38 -0.02 0.00 16 44 H 0.10 -0.57 6.33 -2.39 -0.02 -0.59 16 45 H 0.18 -2.61 6.30 -2.91 -0.02 -2.63 16 46 H 0.16 -1.96 4.83 -2.91 -0.01 -1.97 16 Total: 0.00 -27.75 402.97 -0.05 -27.80 By element: Atomic # 1 Polarization: -20.88 SS G_CDS: -0.38 Total: -21.26 kcal Atomic # 6 Polarization: 3.49 SS G_CDS: 3.63 Total: 7.12 kcal Atomic # 7 Polarization: 4.36 SS G_CDS: -2.36 Total: 2.00 kcal Atomic # 8 Polarization: -9.66 SS G_CDS: -2.32 Total: -11.98 kcal Atomic # 14 Polarization: -4.52 SS G_CDS: 2.05 Total: -2.47 kcal Atomic # 35 Polarization: -0.53 SS G_CDS: -0.68 Total: -1.21 kcal Total: -27.75 -0.05 -27.80 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.502 kcal (2) G-P(sol) polarization free energy of solvation -27.750 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.249 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.051 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.802 kcal (6) G-S(sol) free energy of system = (1) + (5) -10.300 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds