Wall clock time and date at job start Sun Mar 7 2021 08:58:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86304 * 109.47247 * 2 1 4 4 C 1.50697 * 109.46978 * 119.99635 * 2 1 3 5 5 C 1.35450 * 125.56807 * 245.02435 * 4 2 1 6 6 C 1.39836 * 107.87149 * 179.97438 * 5 4 2 7 7 C 1.37875 * 107.07910 * 0.02562 * 6 5 4 8 8 C 1.46683 * 126.22816 * 180.02562 * 7 6 5 9 9 O 1.21687 * 120.00100 * 0.02562 * 8 7 6 10 10 N 1.34780 * 119.99469 * 180.02562 * 8 7 6 11 11 C 1.46501 * 119.99857 * 179.97438 * 10 8 7 12 12 H 1.09001 * 112.90463 * 336.25812 * 11 10 8 13 13 C 1.53780 * 113.61288 * 107.50417 * 11 10 8 14 14 C 1.53776 * 87.08140 * 139.98574 * 13 11 10 15 15 H 1.08999 * 113.69502 * 89.13028 * 14 13 11 16 16 C 1.50706 * 113.61107 * 220.02213 * 14 13 11 17 17 C 1.38233 * 120.00109 * 37.21915 * 16 14 13 18 18 C 1.38238 * 119.99754 * 179.76611 * 17 16 14 19 19 C 1.38234 * 120.00038 * 0.48818 * 18 17 16 20 20 C 1.38238 * 120.00047 * 359.78460 * 19 18 17 21 21 C 1.38235 * 120.00108 * 359.96171 * 20 19 18 22 22 C 1.53775 * 113.61822 * 205.00369 * 11 10 8 23 23 N 1.35535 * 125.56643 * 65.29764 * 4 2 1 24 24 H 0.96701 * 114.00481 * 300.00387 * 1 2 3 25 25 H 1.09002 * 109.47399 * 239.99923 * 2 1 3 26 26 H 1.48498 * 109.99893 * 299.99763 * 3 2 1 27 27 H 1.48502 * 110.00075 * 61.31495 * 3 2 1 28 28 H 1.08008 * 126.06511 * 0.02562 * 5 4 2 29 29 H 1.07999 * 126.46097 * 179.97438 * 6 5 4 30 30 H 0.97000 * 120.00138 * 0.02562 * 10 8 7 31 31 H 1.08996 * 113.61438 * 25.43396 * 13 11 10 32 32 H 1.09006 * 113.61530 * 254.53398 * 13 11 10 33 33 H 1.08004 * 119.99934 * 0.02562 * 17 16 14 34 34 H 1.07999 * 119.99931 * 180.25459 * 18 17 16 35 35 H 1.08001 * 120.00294 * 179.76932 * 19 18 17 36 36 H 1.08000 * 120.00559 * 179.97438 * 20 19 18 37 37 H 1.07999 * 120.00165 * 179.97438 * 21 20 19 38 38 H 1.08999 * 113.61967 * 105.46923 * 22 11 10 39 39 H 1.09003 * 113.68863 * 334.58029 * 22 11 10 40 40 H 0.97001 * 125.67537 * 0.06783 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.6325 -0.1392 2.2388 6 6 2.9068 -1.1306 3.1861 7 6 2.3532 -2.3030 2.7171 8 6 2.3935 -3.6085 3.3846 9 8 2.9555 -3.7263 4.4574 10 7 1.8079 -4.6777 2.8095 11 6 1.8486 -5.9817 3.4759 12 1 2.6818 -6.0765 4.1722 13 6 0.4972 -6.4122 4.0702 14 6 0.8199 -7.8313 3.5737 15 1 1.3718 -8.4331 4.2958 16 6 -0.3701 -8.5544 2.9972 17 6 -1.3067 -7.8608 2.2538 18 6 -2.3957 -8.5250 1.7210 19 6 -2.5533 -9.8808 1.9400 20 6 -1.6196 -10.5732 2.6881 21 6 -0.5279 -9.9101 3.2165 22 6 1.7139 -7.1712 2.5107 23 7 1.7596 -2.0261 1.5064 24 1 -0.3934 0.4417 0.7650 25 1 1.7924 -0.5138 -0.8900 26 1 1.5616 2.4679 -1.2085 27 1 1.5879 2.4586 1.2242 28 1 2.9268 0.8982 2.3007 29 1 3.4506 -1.0024 4.1103 30 1 1.3603 -4.5838 1.9541 31 1 -0.3618 -5.9607 3.5737 32 1 0.4514 -6.3294 5.1561 33 1 -1.1855 -6.8008 2.0858 34 1 -3.1253 -7.9840 1.1368 35 1 -3.4061 -10.3990 1.5268 36 1 -1.7429 -11.6324 2.8596 37 1 0.2014 -10.4510 3.8013 38 1 2.6505 -7.7013 2.3375 39 1 1.1880 -6.9286 1.5873 40 1 1.2946 -2.6659 0.9449 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:44 Heat of formation + Delta-G solvation = 28.853656 kcal Electronic energy + Delta-G solvation = -22989.865486 eV Core-core repulsion = 19544.357530 eV Total energy + Delta-G solvation = -3445.507956 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.131 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.54544 -41.39553 -40.02091 -38.66232 -37.88842 -34.85660 -32.32500 -31.91689 -31.75597 -31.19402 -27.32497 -26.84314 -25.79997 -23.73803 -23.43138 -22.23547 -21.49049 -21.26026 -20.59191 -19.65645 -18.27507 -18.20008 -17.10081 -16.74657 -16.55575 -16.36723 -16.03056 -15.83525 -15.41673 -15.23774 -15.14100 -14.64279 -14.42221 -14.34645 -14.17208 -14.03462 -13.95804 -13.66236 -13.61436 -13.16814 -12.63854 -12.41165 -12.37867 -11.93212 -11.90019 -11.77269 -11.54234 -11.17103 -10.87098 -10.18977 -10.09153 -9.86888 -9.61167 -9.28627 -4.99694 0.33909 0.38503 0.45133 1.08767 1.54325 1.57481 1.80770 2.00874 2.12863 2.36418 2.78001 3.17408 3.33491 3.51316 3.56495 3.61732 3.74687 3.83018 3.94963 4.04888 4.08538 4.18930 4.20108 4.25692 4.39198 4.47443 4.52737 4.55494 4.62906 4.69939 4.84353 4.91329 4.98079 5.01877 5.07386 5.07932 5.13236 5.39964 5.52597 5.58148 5.59420 5.67132 5.81455 6.04937 6.17222 6.21045 6.40907 7.10827 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.062 4.062 3 Si 0.718 3.282 4 C 0.023 3.977 5 C -0.199 4.199 6 C -0.098 4.098 7 C -0.051 4.051 8 C 0.591 3.409 9 O -0.523 6.523 10 N -0.722 5.722 11 C 0.124 3.876 12 H 0.121 0.879 13 C -0.145 4.145 14 C -0.070 4.070 15 H 0.104 0.896 16 C -0.070 4.070 17 C -0.118 4.118 18 C -0.118 4.118 19 C -0.124 4.124 20 C -0.117 4.117 21 C -0.115 4.115 22 C -0.136 4.136 23 N -0.524 5.524 24 H 0.380 0.620 25 H 0.119 0.881 26 H -0.256 1.256 27 H -0.255 1.255 28 H 0.151 0.849 29 H 0.153 0.847 30 H 0.394 0.606 31 H 0.088 0.912 32 H 0.078 0.922 33 H 0.119 0.881 34 H 0.121 0.879 35 H 0.122 0.878 36 H 0.123 0.877 37 H 0.122 0.878 38 H 0.080 0.920 39 H 0.088 0.912 40 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.042 -0.411 -3.201 3.228 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.171 4.171 3 Si 0.617 3.383 4 C -0.095 4.095 5 C -0.224 4.224 6 C -0.124 4.124 7 C -0.165 4.165 8 C 0.379 3.621 9 O -0.399 6.399 10 N -0.372 5.372 11 C 0.019 3.981 12 H 0.139 0.861 13 C -0.184 4.184 14 C -0.089 4.089 15 H 0.122 0.878 16 C -0.070 4.070 17 C -0.136 4.136 18 C -0.136 4.136 19 C -0.142 4.142 20 C -0.135 4.135 21 C -0.133 4.133 22 C -0.174 4.174 23 N -0.120 5.120 24 H 0.229 0.771 25 H 0.137 0.863 26 H -0.181 1.181 27 H -0.179 1.179 28 H 0.168 0.832 29 H 0.171 0.829 30 H 0.228 0.772 31 H 0.107 0.893 32 H 0.097 0.903 33 H 0.137 0.863 34 H 0.139 0.861 35 H 0.140 0.860 36 H 0.141 0.859 37 H 0.140 0.860 38 H 0.099 0.901 39 H 0.106 0.894 40 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges 0.260 -0.118 -3.025 3.038 hybrid contribution -1.643 -0.657 -0.203 1.781 sum -1.383 -0.776 -3.228 3.596 Atomic orbital electron populations 1.86596 1.17563 1.80235 1.49687 1.24903 0.84051 1.11894 0.96243 0.94212 0.91413 0.72106 0.80543 1.21087 1.04701 0.84180 0.99482 1.20742 1.05956 1.00328 0.95346 1.21344 1.00766 0.90111 1.00201 1.20486 1.09871 0.95956 0.90140 1.17096 0.78204 0.82208 0.84616 1.90870 1.43905 1.84319 1.20759 1.45883 1.57795 1.09102 1.24455 1.22585 0.99206 0.80453 0.95807 0.86088 1.23624 0.97850 0.94728 1.02174 1.21328 0.94468 0.95088 0.98011 0.87771 1.19636 0.95713 0.93784 0.97889 1.20971 0.94643 0.99666 0.98351 1.21168 0.97874 0.94790 0.99773 1.21207 0.99358 0.94624 0.98993 1.21204 0.94544 1.00085 0.97665 1.21096 0.98129 0.93966 1.00133 1.23457 1.00567 0.95786 0.97584 1.41949 1.43434 1.09243 1.17388 0.77122 0.86310 1.18057 1.17881 0.83157 0.82928 0.77195 0.89331 0.90338 0.86328 0.86063 0.86035 0.85930 0.85959 0.90085 0.89390 0.74682 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.29 12.88 -35.23 -0.45 -0.16 16 2 C -0.06 0.12 3.08 36.00 0.11 0.23 16 3 Si 0.72 -1.68 30.56 -169.99 -5.19 -6.87 16 4 C 0.02 -0.02 6.46 -81.95 -0.53 -0.55 16 5 C -0.20 0.03 9.32 -39.98 -0.37 -0.34 16 6 C -0.10 -0.15 10.65 -39.12 -0.42 -0.57 16 7 C -0.05 -0.06 7.06 -81.98 -0.58 -0.64 16 8 C 0.59 1.41 7.79 -12.85 -0.10 1.31 16 9 O -0.52 -3.24 16.48 5.20 0.09 -3.15 16 10 N -0.72 0.55 5.35 -54.32 -0.29 0.26 16 11 C 0.12 -0.08 4.24 -67.12 -0.28 -0.37 16 12 H 0.12 0.10 7.46 -51.93 -0.39 -0.29 16 13 C -0.15 0.12 7.25 -25.92 -0.19 -0.07 16 14 C -0.07 0.09 3.98 -90.96 -0.36 -0.27 16 15 H 0.10 -0.18 8.09 -51.93 -0.42 -0.60 16 16 C -0.07 -0.01 5.29 -104.62 -0.55 -0.56 16 17 C -0.12 0.00 8.62 -39.58 -0.34 -0.34 16 18 C -0.12 -0.03 10.05 -39.58 -0.40 -0.43 16 19 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 20 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 21 C -0.12 -0.04 9.71 -39.58 -0.38 -0.43 16 22 C -0.14 0.27 7.30 -25.92 -0.19 0.08 16 23 N -0.52 0.58 5.99 -5.70 -0.03 0.55 16 24 H 0.38 -1.12 8.70 45.56 0.40 -0.72 16 25 H 0.12 -0.35 7.96 -51.93 -0.41 -0.76 16 26 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 27 H -0.25 0.05 7.11 56.52 0.40 0.45 16 28 H 0.15 -0.29 6.19 -52.48 -0.32 -0.62 16 29 H 0.15 0.21 8.06 -52.49 -0.42 -0.22 16 30 H 0.39 -1.32 7.86 -40.82 -0.32 -1.64 16 31 H 0.09 -0.09 6.30 -51.93 -0.33 -0.42 16 32 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 33 H 0.12 -0.18 6.64 -52.48 -0.35 -0.53 16 34 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 35 H 0.12 -0.13 8.06 -52.49 -0.42 -0.56 16 36 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 37 H 0.12 -0.13 8.05 -52.49 -0.42 -0.56 16 38 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 39 H 0.09 -0.22 7.71 -51.93 -0.40 -0.62 16 40 H 0.42 -1.43 8.19 -40.82 -0.33 -1.77 16 LS Contribution 338.05 15.07 5.09 5.09 Total: 0.00 -7.74 338.05 -11.21 -18.96 By element: Atomic # 1 Polarization: -5.78 SS G_CDS: -5.04 Total: -10.82 kcal Atomic # 6 Polarization: 1.53 SS G_CDS: -5.38 Total: -3.85 kcal Atomic # 7 Polarization: 1.13 SS G_CDS: -0.32 Total: 0.81 kcal Atomic # 8 Polarization: -2.95 SS G_CDS: -0.37 Total: -3.31 kcal Atomic # 14 Polarization: -1.68 SS G_CDS: -5.19 Total: -6.87 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -7.74 -11.21 -18.96 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.810 kcal (2) G-P(sol) polarization free energy of solvation -7.743 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.067 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.213 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.957 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.854 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds