Wall clock time and date at job start Sun Mar 7 2021 08:58:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35962 * 116.99777 * 2 1 4 4 C 1.39450 * 120.11922 * 179.97438 * 3 2 1 5 5 O 1.34775 * 133.24089 * 0.35532 * 4 3 2 6 6 C 1.34932 * 110.84090 * 180.02562 * 5 4 3 7 7 C 1.46990 * 125.14054 * 179.81326 * 6 5 4 8 8 O 1.21647 * 119.99859 * 179.69774 * 7 6 5 9 9 N 1.34783 * 119.99730 * 359.69492 * 7 6 5 10 10 C 1.46499 * 119.99531 * 180.02562 * 9 7 6 11 11 H 1.08996 * 112.85385 * 23.80181 * 10 9 7 12 12 C 1.53781 * 113.61225 * 155.00207 * 10 9 7 13 13 C 1.53786 * 87.17350 * 139.93836 * 12 10 9 14 14 H 1.08993 * 113.61491 * 89.15923 * 13 12 10 15 15 C 1.50700 * 113.61132 * 220.06314 * 13 12 10 16 16 C 1.38239 * 120.00420 * 59.72603 * 15 13 12 17 17 C 1.38233 * 120.00053 * 179.74323 * 16 15 13 18 18 C 1.38235 * 119.99755 * 0.52615 * 17 16 15 19 19 C 1.38233 * 120.00311 * 359.75050 * 18 17 16 20 20 C 1.38235 * 119.99543 * 239.99541 * 15 13 12 21 21 C 1.53782 * 113.61191 * 252.49880 * 10 9 7 22 22 C 1.35808 * 109.71656 * 359.54908 * 6 5 4 23 23 C 1.40610 * 119.13625 * 179.97438 * 4 3 2 24 24 C 1.39780 * 120.12201 * 0.04159 * 23 4 3 25 25 C 1.50694 * 120.09578 * 179.97438 * 24 23 4 26 26 O 1.42891 * 109.47436 * 75.00208 * 25 24 23 27 27 Si 1.86303 * 109.47052 * 195.00317 * 25 24 23 28 28 C 1.36633 * 119.80744 * 0.02562 * 24 23 4 29 29 C 1.38260 * 120.12474 * 359.97438 * 3 2 1 30 30 H 1.09004 * 109.47011 * 179.97438 * 1 2 3 31 31 H 1.08994 * 109.47435 * 300.00158 * 1 2 3 32 32 H 1.08997 * 109.46780 * 60.00522 * 1 2 3 33 33 H 0.96997 * 119.99692 * 0.02562 * 9 7 6 34 34 H 1.09002 * 113.61445 * 254.52836 * 12 10 9 35 35 H 1.09002 * 113.61408 * 25.34566 * 12 10 9 36 36 H 1.07997 * 119.99709 * 359.97438 * 16 15 13 37 37 H 1.08001 * 119.99826 * 180.29803 * 17 16 15 38 38 H 1.08005 * 119.99810 * 179.76861 * 18 17 16 39 39 H 1.07998 * 120.00396 * 180.02562 * 19 18 17 40 40 H 1.07991 * 120.00202 * 0.02562 * 20 15 13 41 41 H 1.08997 * 113.61668 * 334.56642 * 21 10 9 42 42 H 1.08998 * 113.61674 * 105.39151 * 21 10 9 43 43 H 1.08011 * 126.95456 * 180.26399 * 22 6 5 44 44 H 1.09002 * 109.47051 * 314.99553 * 25 24 23 45 45 H 0.96696 * 114.00313 * 60.00074 * 26 25 24 46 46 H 1.48502 * 110.00081 * 179.97438 * 27 25 24 47 47 H 1.48497 * 109.99789 * 301.31556 * 27 25 24 48 48 H 1.08007 * 119.74701 * 179.97438 * 28 24 23 49 49 H 1.08000 * 119.65873 * 359.97438 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 3.4387 1.2874 0.0005 5 8 4.4141 0.3573 -0.0050 6 6 5.6317 0.9387 -0.0009 7 6 6.9131 0.2185 -0.0010 8 8 7.9595 0.8389 -0.0026 9 7 6.9286 -1.1293 0.0007 10 6 8.2057 -1.8470 0.0011 11 1 9.0252 -1.2528 0.4054 12 6 8.1173 -3.2613 0.5984 13 6 9.0646 -3.7129 -0.5257 14 1 10.1201 -3.6302 -0.2667 15 6 8.7081 -5.0540 -1.1133 16 6 7.4715 -5.2444 -1.7012 17 6 7.1465 -6.4731 -2.2449 18 6 8.0539 -7.5145 -2.1910 19 6 9.2883 -7.3258 -1.5980 20 6 9.6155 -6.0954 -1.0594 21 6 8.5346 -2.5199 -1.3420 22 6 5.4944 2.2898 -0.0024 23 6 4.0554 2.5510 0.0000 24 6 3.2765 3.7117 -0.0002 25 6 3.9381 5.0657 -0.0002 26 8 4.4607 5.3405 -1.3015 27 14 2.6863 6.3685 0.4542 28 6 1.9136 3.6151 0.0006 29 6 1.2957 2.3726 -0.0005 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5138 0.8899 32 1 -0.3633 0.5137 -0.8900 33 1 6.0942 -1.6238 0.0016 34 1 8.5519 -3.3426 1.5947 35 1 7.1220 -3.7012 0.5337 36 1 6.7608 -4.4322 -1.7391 37 1 6.1822 -6.6204 -2.7084 38 1 7.7986 -8.4756 -2.6124 39 1 9.9974 -8.1393 -1.5563 40 1 10.5797 -5.9481 -0.5959 41 1 7.6538 -2.7577 -1.9385 42 1 9.3052 -2.0018 -1.9129 43 1 6.2874 3.0231 -0.0040 44 1 4.7504 5.0732 0.7266 45 1 3.7921 5.3497 -2.0000 46 1 3.3264 7.7085 0.4583 47 1 1.5579 6.3472 -0.5110 48 1 1.3128 4.5126 0.0009 49 1 0.2174 2.3120 -0.0014 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16147626_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:45 Heat of formation + Delta-G solvation = -6.969558 kcal Electronic energy + Delta-G solvation = -33588.846666 eV Core-core repulsion = 29029.630786 eV Total energy + Delta-G solvation = -4559.215880 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.150 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -43.78478 -41.56232 -40.74937 -40.22858 -39.14174 -38.74109 -37.12905 -34.97952 -33.68184 -32.08770 -31.84792 -31.67827 -30.91418 -28.59653 -26.76339 -26.68299 -26.18650 -24.70846 -24.02919 -23.58578 -22.47709 -21.92301 -21.78488 -20.59940 -19.65281 -19.04919 -18.55892 -18.28250 -17.85703 -17.77035 -17.18581 -16.98414 -16.62019 -16.47900 -16.22616 -16.10284 -15.90441 -15.83809 -15.52153 -15.32663 -14.76531 -14.59602 -14.56431 -14.32823 -14.23760 -14.19504 -13.99983 -13.51248 -13.50029 -13.44002 -13.28964 -13.19321 -12.60398 -12.48659 -12.37014 -12.27478 -12.13550 -11.89785 -11.78073 -11.67006 -11.55659 -11.38516 -11.04618 -10.61693 -10.32160 -9.85437 -9.82467 -9.56451 -9.03050 -4.89335 -0.70180 0.07646 0.41849 0.49398 0.58619 1.14927 1.29853 1.59126 1.84322 1.88732 1.97707 2.12252 2.37216 2.82382 3.14400 3.37106 3.41117 3.53353 3.61815 3.64050 3.69129 3.79148 3.85032 3.88715 3.95577 4.03348 4.12072 4.14997 4.17416 4.28500 4.31926 4.41419 4.42637 4.47973 4.52360 4.60079 4.65067 4.69312 4.75937 4.78926 4.81420 4.84869 4.91009 4.97296 5.01558 5.02848 5.13150 5.17787 5.19691 5.30001 5.41761 5.56647 5.58065 5.63760 5.72741 6.11688 6.16888 6.27182 6.49375 6.78064 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.333 6.333 3 C 0.138 3.862 4 C 0.021 3.979 5 O -0.181 6.181 6 C -0.034 4.034 7 C 0.603 3.397 8 O -0.545 6.545 9 N -0.693 5.693 10 C 0.116 3.884 11 H 0.112 0.888 12 C -0.124 4.124 13 C -0.065 4.065 14 H 0.112 0.888 15 C -0.077 4.077 16 C -0.127 4.127 17 C -0.130 4.130 18 C -0.137 4.137 19 C -0.130 4.130 20 C -0.128 4.128 21 C -0.143 4.143 22 C -0.113 4.113 23 C -0.096 4.096 24 C -0.100 4.100 25 C -0.090 4.090 26 O -0.548 6.548 27 Si 0.782 3.218 28 C -0.088 4.088 29 C -0.165 4.165 30 H 0.115 0.885 31 H 0.077 0.923 32 H 0.073 0.927 33 H 0.417 0.583 34 H 0.089 0.911 35 H 0.096 0.904 36 H 0.130 0.870 37 H 0.133 0.867 38 H 0.133 0.867 39 H 0.134 0.866 40 H 0.134 0.866 41 H 0.092 0.908 42 H 0.072 0.928 43 H 0.171 0.829 44 H 0.115 0.885 45 H 0.386 0.614 46 H -0.305 1.305 47 H -0.262 1.262 48 H 0.166 0.834 49 H 0.180 0.820 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.745 -2.202 2.086 8.317 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.247 6.247 3 C 0.092 3.908 4 C -0.027 4.027 5 O -0.083 6.083 6 C -0.084 4.084 7 C 0.389 3.611 8 O -0.424 6.424 9 N -0.342 5.342 10 C 0.012 3.988 11 H 0.130 0.870 12 C -0.162 4.162 13 C -0.083 4.083 14 H 0.130 0.870 15 C -0.077 4.077 16 C -0.145 4.145 17 C -0.148 4.148 18 C -0.155 4.155 19 C -0.148 4.148 20 C -0.146 4.146 21 C -0.181 4.181 22 C -0.133 4.133 23 C -0.097 4.097 24 C -0.101 4.101 25 C -0.197 4.197 26 O -0.356 6.356 27 Si 0.685 3.315 28 C -0.106 4.106 29 C -0.184 4.184 30 H 0.134 0.866 31 H 0.096 0.904 32 H 0.092 0.908 33 H 0.254 0.746 34 H 0.107 0.893 35 H 0.115 0.885 36 H 0.148 0.852 37 H 0.151 0.849 38 H 0.151 0.849 39 H 0.152 0.848 40 H 0.152 0.848 41 H 0.110 0.890 42 H 0.091 0.909 43 H 0.189 0.811 44 H 0.133 0.867 45 H 0.236 0.764 46 H -0.233 1.233 47 H -0.188 1.188 48 H 0.183 0.817 49 H 0.197 0.803 Dipole moment (debyes) X Y Z Total from point charges -6.824 -1.566 2.168 7.329 hybrid contribution -0.003 -0.421 -1.366 1.429 sum -6.827 -1.987 0.802 7.155 Atomic orbital electron populations 1.23487 0.75309 1.06020 1.03171 1.86146 1.24314 1.25806 1.88429 1.17980 0.86079 0.86863 0.99917 1.19215 0.88248 0.87108 1.08114 1.84010 1.12694 1.35054 1.76506 1.21954 0.84040 0.92743 1.09664 1.16719 0.84985 0.82921 0.76511 1.90887 1.31403 1.68265 1.51893 1.45880 1.11027 1.04803 1.72526 1.22735 0.85896 0.92065 0.98064 0.87028 1.23411 1.00934 0.92685 0.99145 1.21335 1.00629 0.90170 0.96214 0.87015 1.19780 0.94286 0.95132 0.98510 1.21197 0.96720 0.97746 0.98814 1.21419 1.00267 0.93369 0.99720 1.21451 0.94333 0.99796 0.99892 1.21443 0.97262 0.97853 0.98195 1.21330 1.00040 0.93041 1.00149 1.23638 1.01990 0.95842 0.96643 1.22858 0.95421 0.94430 1.00619 1.19575 0.92297 0.92824 1.05014 1.19555 0.93479 0.93861 1.03172 1.25392 1.07749 0.98666 0.87939 1.86605 1.38968 1.92786 1.17258 0.93882 0.75412 0.73432 0.88727 1.20888 0.92905 0.98844 0.97960 1.21372 1.01815 0.89573 1.05604 0.86648 0.90436 0.90842 0.74604 0.89284 0.88532 0.85213 0.84878 0.84923 0.84782 0.84839 0.88954 0.90936 0.81116 0.86736 0.76443 1.23319 1.18762 0.81719 0.80276 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.75 10.50 -93.13 -0.98 -1.73 16 3 C 0.14 0.40 6.70 22.57 0.15 0.55 16 4 C 0.02 0.15 7.35 23.14 0.17 0.32 16 5 O -0.18 -1.51 10.28 -13.44 -0.14 -1.65 16 6 C -0.03 -0.29 7.07 24.00 0.17 -0.12 16 7 C 0.60 5.21 7.80 86.54 0.67 5.89 16 8 O -0.55 -8.02 16.42 -4.18 -0.07 -8.09 16 9 N -0.69 -1.67 5.35 -443.71 -2.37 -4.04 16 10 C 0.12 0.06 4.24 45.52 0.19 0.26 16 11 H 0.11 0.35 7.46 -2.39 -0.02 0.33 16 12 C -0.12 0.35 7.29 31.12 0.23 0.58 16 13 C -0.06 0.11 3.99 -10.95 -0.04 0.06 16 14 H 0.11 -0.35 8.10 -2.39 -0.02 -0.37 16 15 C -0.08 -0.08 5.29 -19.86 -0.11 -0.18 16 16 C -0.13 -0.14 8.60 22.27 0.19 0.05 16 17 C -0.13 -0.19 10.05 22.27 0.22 0.04 16 18 C -0.14 -0.22 10.05 22.27 0.22 0.01 16 19 C -0.13 -0.20 10.05 22.27 0.22 0.03 16 20 C -0.13 -0.18 9.71 22.27 0.22 0.04 16 21 C -0.14 0.02 7.26 31.18 0.23 0.25 16 22 C -0.11 -0.95 10.68 23.79 0.25 -0.69 16 23 C -0.10 -0.61 6.16 -20.24 -0.12 -0.74 16 24 C -0.10 -0.13 5.26 -19.87 -0.10 -0.23 16 25 C -0.09 -0.03 2.70 71.23 0.19 0.17 16 26 O -0.55 -2.08 12.88 -148.98 -1.92 -4.00 16 27 Si 0.78 -2.98 30.25 68.60 2.08 -0.91 16 28 C -0.09 0.29 8.62 22.02 0.19 0.48 16 29 C -0.17 0.54 9.03 22.40 0.20 0.74 16 30 H 0.12 -1.09 8.14 -2.38 -0.02 -1.11 16 31 H 0.08 -0.81 7.66 -2.39 -0.02 -0.82 16 32 H 0.07 -0.73 7.66 -2.39 -0.02 -0.75 16 33 H 0.42 -0.43 8.44 -92.71 -0.78 -1.21 16 34 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 35 H 0.10 -0.36 7.69 -2.39 -0.02 -0.38 16 36 H 0.13 -0.22 6.68 -2.91 -0.02 -0.24 16 37 H 0.13 -0.24 8.06 -2.91 -0.02 -0.27 16 38 H 0.13 -0.22 8.06 -2.91 -0.02 -0.25 16 39 H 0.13 -0.25 8.06 -2.91 -0.02 -0.27 16 40 H 0.13 -0.24 8.05 -2.92 -0.02 -0.27 16 41 H 0.09 -0.04 6.33 -2.39 -0.02 -0.06 16 42 H 0.07 0.10 8.14 -2.39 -0.02 0.08 16 43 H 0.17 1.35 8.06 -2.91 -0.02 1.33 16 44 H 0.11 0.05 7.96 -2.39 -0.02 0.03 16 45 H 0.39 -1.04 8.70 -74.06 -0.64 -1.68 16 46 H -0.30 -1.43 7.11 99.48 0.71 -0.72 16 47 H -0.26 0.80 6.69 99.48 0.67 1.47 16 48 H 0.17 -1.41 4.81 -2.91 -0.01 -1.42 16 49 H 0.18 -1.84 6.26 -2.91 -0.02 -1.86 16 Total: 0.00 -21.35 409.64 0.65 -20.69 By element: Atomic # 1 Polarization: -8.38 SS G_CDS: -0.41 Total: -8.79 kcal Atomic # 6 Polarization: 4.04 SS G_CDS: 4.46 Total: 8.50 kcal Atomic # 7 Polarization: -1.67 SS G_CDS: -2.37 Total: -4.04 kcal Atomic # 8 Polarization: -12.35 SS G_CDS: -3.10 Total: -15.45 kcal Atomic # 14 Polarization: -2.98 SS G_CDS: 2.08 Total: -0.91 kcal Total: -21.35 0.65 -20.69 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.723 kcal (2) G-P(sol) polarization free energy of solvation -21.346 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.623 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.653 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.693 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.970 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds