Wall clock time and date at job start Sun Mar 7 2021 08:58:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.33821 * 122.44859 * 2 1 4 4 C 1.50705 * 124.51846 * 0.02562 * 3 2 1 5 5 O 1.42894 * 109.47171 * 330.00263 * 4 3 2 6 6 Si 1.86298 * 109.46780 * 209.99704 * 4 3 2 7 7 S 1.70614 * 110.95589 * 180.28531 * 3 2 1 8 8 C 1.75828 * 91.56298 * 359.65923 * 7 3 2 9 9 C 1.46587 * 125.45896 * 180.02562 * 8 7 3 10 10 O 1.21704 * 119.99977 * 180.31738 * 9 8 7 11 11 N 1.34777 * 119.99877 * 0.31966 * 9 8 7 12 12 C 1.46501 * 119.99600 * 179.97438 * 11 9 8 13 13 H 1.08993 * 112.85107 * 23.80685 * 12 11 9 14 14 C 1.53781 * 113.61012 * 154.99983 * 12 11 9 15 15 C 1.53788 * 87.08120 * 139.97839 * 14 12 11 16 16 H 1.08999 * 113.60515 * 89.19834 * 15 14 12 17 17 C 1.50694 * 113.61727 * 220.02047 * 15 14 12 18 18 C 1.38232 * 120.00456 * 59.72551 * 17 15 14 19 19 C 1.38230 * 120.00450 * 179.78569 * 18 17 15 20 20 C 1.38237 * 119.99878 * 0.47340 * 19 18 17 21 21 C 1.38235 * 119.99647 * 359.75864 * 20 19 18 22 22 C 1.38232 * 120.00402 * 0.02711 * 21 20 19 23 23 C 1.53779 * 87.07934 * 334.56863 * 15 14 12 24 24 C 1.36649 * 109.08443 * 0.33710 * 8 7 3 25 25 H 1.08997 * 109.46955 * 90.00067 * 1 2 3 26 26 H 1.09003 * 109.46616 * 209.99922 * 1 2 3 27 27 H 1.08995 * 109.47081 * 330.00033 * 1 2 3 28 28 H 1.09004 * 109.46779 * 90.00586 * 4 3 2 29 29 H 0.96709 * 113.99337 * 180.02562 * 5 4 3 30 30 H 1.48506 * 109.99834 * 60.00830 * 6 4 3 31 31 H 1.48502 * 110.00011 * 181.32094 * 6 4 3 32 32 H 0.96998 * 119.99787 * 0.02562 * 11 9 8 33 33 H 1.08993 * 113.61585 * 254.53164 * 14 12 11 34 34 H 1.09005 * 113.61652 * 25.35309 * 14 12 11 35 35 H 1.08005 * 119.99685 * 0.02562 * 18 17 15 36 36 H 1.08001 * 120.00500 * 180.24840 * 19 18 17 37 37 H 1.07998 * 120.00080 * 179.79335 * 20 19 18 38 38 H 1.08004 * 119.99430 * 180.02562 * 21 20 19 39 39 H 1.07999 * 120.00212 * 179.97438 * 22 21 20 40 40 H 1.09002 * 113.61453 * 270.88181 * 23 15 14 41 41 H 1.09003 * 113.61271 * 139.97660 * 23 15 14 42 42 H 1.08001 * 123.35771 * 179.78645 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1293 0.0000 4 6 1.6353 2.5162 0.0006 5 8 0.3750 2.4982 -0.6725 6 14 2.7920 3.6830 -0.8778 7 16 3.8969 0.7894 -0.0079 8 6 3.5938 -0.9426 -0.0008 9 6 4.6232 -1.9861 -0.0026 10 8 4.3003 -3.1595 -0.0030 11 7 5.9274 -1.6461 -0.0036 12 6 6.9562 -2.6890 -0.0047 13 1 6.5989 -3.6356 -0.4101 14 6 8.2974 -2.2305 -0.6013 15 6 8.9801 -3.0281 0.5225 16 1 9.1781 -4.0677 0.2617 17 6 10.1806 -2.3338 1.1121 18 6 10.0403 -1.0913 1.7015 19 6 11.1406 -0.4564 2.2463 20 6 12.3833 -1.0596 2.1930 21 6 12.5245 -2.3000 1.5994 22 6 11.4234 -2.9369 1.0585 23 6 7.6917 -2.8303 1.3384 24 6 2.2447 -1.1600 -0.0005 25 1 -0.3633 0.0000 -1.0276 26 1 -0.3633 -0.8900 0.5138 27 1 -0.3633 0.8899 0.5138 28 1 1.4937 2.8503 1.0284 29 1 -0.0628 3.3597 -0.7106 30 1 2.9934 3.2384 -2.2803 31 1 2.2371 5.0602 -0.8563 32 1 6.1847 -0.7109 -0.0028 33 1 8.4905 -2.6274 -1.5979 34 1 8.4596 -1.1546 -0.5354 35 1 9.0701 -0.6183 1.7397 36 1 11.0302 0.5126 2.7103 37 1 13.2436 -0.5621 2.6157 38 1 13.4954 -2.7714 1.5582 39 1 11.5338 -3.9058 0.5944 40 1 7.6888 -1.9185 1.9358 41 1 7.3958 -3.7115 1.9076 42 1 1.8019 -2.1451 0.0001 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_6739946.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:50 Heat of formation + Delta-G solvation = 15.326172 kcal Electronic energy + Delta-G solvation = -24564.870199 eV Core-core repulsion = 20989.590045 eV Total energy + Delta-G solvation = -3575.280153 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.108 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.49664 -40.43549 -39.67122 -38.63352 -37.51709 -34.72643 -32.38269 -31.83858 -31.50697 -30.19746 -27.14938 -26.77259 -25.51387 -24.24125 -23.58451 -22.41156 -21.65365 -20.57071 -19.85391 -19.13339 -18.52799 -18.18913 -17.20861 -17.02454 -16.50576 -16.27195 -16.10631 -15.94939 -15.54704 -15.31077 -14.91221 -14.58294 -14.46339 -14.31112 -14.19970 -14.14935 -13.96169 -13.54519 -13.22395 -13.18804 -13.06713 -12.92547 -12.56845 -12.54218 -12.34288 -12.13576 -11.96279 -11.84107 -11.71033 -11.47124 -11.01729 -10.84462 -10.10977 -9.81603 -9.60601 -9.55080 -9.34385 -5.24783 -0.56644 0.29735 0.43010 0.50432 0.71720 1.02323 1.36963 1.47169 1.80805 2.08358 2.22890 2.83273 3.06810 3.40132 3.57953 3.62547 3.68265 3.77616 3.88952 4.00830 4.10224 4.12410 4.14453 4.24191 4.26756 4.43778 4.52336 4.58335 4.62024 4.63339 4.68166 4.76042 4.89071 4.92354 4.94448 4.98187 5.07186 5.08879 5.13566 5.19139 5.44605 5.49429 5.51431 5.57849 5.64179 5.72592 6.10193 6.24027 6.41036 7.15064 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C -0.090 4.090 3 C -0.196 4.196 4 C -0.033 4.033 5 O -0.524 6.524 6 Si 0.658 3.342 7 S 0.202 5.798 8 C -0.263 4.263 9 C 0.595 3.405 10 O -0.525 6.525 11 N -0.717 5.717 12 C 0.123 3.877 13 H 0.120 0.880 14 C -0.136 4.136 15 C -0.070 4.070 16 H 0.103 0.897 17 C -0.070 4.070 18 C -0.118 4.118 19 C -0.118 4.118 20 C -0.124 4.124 21 C -0.118 4.118 22 C -0.116 4.116 23 C -0.145 4.145 24 C -0.047 4.047 25 H 0.071 0.929 26 H 0.060 0.940 27 H 0.077 0.923 28 H 0.088 0.912 29 H 0.382 0.618 30 H -0.242 1.242 31 H -0.242 1.242 32 H 0.399 0.601 33 H 0.080 0.920 34 H 0.090 0.910 35 H 0.121 0.879 36 H 0.122 0.878 37 H 0.121 0.879 38 H 0.122 0.878 39 H 0.122 0.878 40 H 0.090 0.910 41 H 0.077 0.923 42 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.366 4.843 1.535 5.604 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.102 4.102 3 C -0.315 4.315 4 C -0.144 4.144 5 O -0.332 6.332 6 Si 0.556 3.444 7 S 0.470 5.530 8 C -0.383 4.383 9 C 0.381 3.619 10 O -0.403 6.403 11 N -0.367 5.367 12 C 0.019 3.981 13 H 0.138 0.862 14 C -0.174 4.174 15 C -0.089 4.089 16 H 0.121 0.879 17 C -0.070 4.070 18 C -0.136 4.136 19 C -0.136 4.136 20 C -0.142 4.142 21 C -0.136 4.136 22 C -0.134 4.134 23 C -0.183 4.183 24 C -0.080 4.080 25 H 0.090 0.910 26 H 0.079 0.921 27 H 0.096 0.904 28 H 0.105 0.895 29 H 0.230 0.770 30 H -0.166 1.166 31 H -0.165 1.165 32 H 0.233 0.767 33 H 0.099 0.901 34 H 0.108 0.892 35 H 0.139 0.861 36 H 0.140 0.860 37 H 0.139 0.861 38 H 0.140 0.860 39 H 0.140 0.860 40 H 0.109 0.891 41 H 0.096 0.904 42 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 3.717 4.836 0.776 6.149 hybrid contribution -2.292 -0.011 -0.085 2.293 sum 1.425 4.825 0.691 5.079 Atomic orbital electron populations 1.20513 0.88679 1.02493 1.02786 1.18706 0.98542 0.90559 1.02406 1.23273 0.98325 0.98538 1.11375 1.24022 0.91467 0.97573 1.01366 1.86689 1.31715 1.35537 1.79259 0.95560 0.86049 0.78669 0.84148 1.82576 1.02236 0.98692 1.69511 1.24589 0.97977 0.96734 1.19002 1.16968 0.81693 0.87381 0.75857 1.90855 1.81585 1.18179 1.49641 1.45843 1.05241 1.09976 1.75688 1.22598 0.85601 0.92736 0.97191 0.86178 1.23470 0.93861 1.01111 0.98967 1.21325 0.91519 0.99640 0.96439 0.87852 1.19634 0.94193 0.94752 0.98402 1.20992 0.98767 0.94977 0.98825 1.21169 0.92835 0.99999 0.99557 1.21203 0.97600 0.95710 0.99726 1.21193 0.98781 0.95434 0.98164 1.21088 0.92261 1.00065 0.99957 1.23628 0.94307 1.03400 0.96996 1.20719 0.90949 1.00110 0.96247 0.90984 0.92105 0.90378 0.89468 0.76958 1.16558 1.16533 0.76658 0.90112 0.89161 0.86121 0.86001 0.86090 0.86016 0.86036 0.89124 0.90380 0.82719 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.08 8.70 36.01 0.31 0.23 16 2 C -0.09 -0.17 5.75 -106.45 -0.61 -0.78 16 3 C -0.20 -0.14 5.57 -35.86 -0.20 -0.34 16 4 C -0.03 0.04 2.75 36.01 0.10 0.14 16 5 O -0.52 0.35 9.81 -35.23 -0.35 0.01 16 6 Si 0.66 -1.10 31.30 -169.99 -5.32 -6.42 16 7 S 0.20 -0.16 19.78 -107.50 -2.13 -2.29 16 8 C -0.26 -0.53 6.45 -36.79 -0.24 -0.76 16 9 C 0.59 1.83 7.78 -12.89 -0.10 1.73 16 10 O -0.53 -3.52 16.44 5.18 0.09 -3.43 16 11 N -0.72 0.00 5.35 -54.35 -0.29 -0.29 16 12 C 0.12 -0.04 4.24 -67.12 -0.28 -0.33 16 13 H 0.12 0.13 7.46 -51.93 -0.39 -0.25 16 14 C -0.14 0.24 7.30 -25.92 -0.19 0.05 16 15 C -0.07 0.09 3.98 -90.96 -0.36 -0.28 16 16 H 0.10 -0.17 8.09 -51.93 -0.42 -0.59 16 17 C -0.07 0.00 5.29 -104.63 -0.55 -0.55 16 18 C -0.12 0.03 8.60 -39.59 -0.34 -0.31 16 19 C -0.12 0.00 10.05 -39.58 -0.40 -0.40 16 20 C -0.12 -0.03 10.05 -39.58 -0.40 -0.43 16 21 C -0.12 -0.04 10.05 -39.58 -0.40 -0.44 16 22 C -0.12 -0.04 9.71 -39.58 -0.38 -0.42 16 23 C -0.14 0.12 7.25 -25.92 -0.19 -0.07 16 24 C -0.05 -0.12 9.80 -40.43 -0.40 -0.51 16 25 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 26 H 0.06 0.01 8.13 -51.93 -0.42 -0.41 16 27 H 0.08 0.05 6.41 -51.93 -0.33 -0.28 16 28 H 0.09 -0.26 7.96 -51.93 -0.41 -0.67 16 29 H 0.38 -1.75 8.74 45.56 0.40 -1.35 16 30 H -0.24 -0.45 7.11 56.52 0.40 -0.04 16 31 H -0.24 0.05 7.11 56.52 0.40 0.46 16 32 H 0.40 -0.93 7.84 -40.82 -0.32 -1.25 16 33 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 34 H 0.09 -0.22 7.69 -51.93 -0.40 -0.62 16 35 H 0.12 -0.23 6.67 -52.48 -0.35 -0.58 16 36 H 0.12 -0.21 8.06 -52.49 -0.42 -0.63 16 37 H 0.12 -0.15 8.06 -52.49 -0.42 -0.58 16 38 H 0.12 -0.14 8.06 -52.48 -0.42 -0.56 16 39 H 0.12 -0.13 8.05 -52.49 -0.42 -0.55 16 40 H 0.09 -0.11 6.32 -51.93 -0.33 -0.44 16 41 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 42 H 0.16 0.36 8.06 -52.49 -0.42 -0.06 16 LS Contribution 360.25 15.07 5.43 5.43 Total: 0.00 -7.46 360.25 -12.75 -20.21 By element: Atomic # 1 Polarization: -4.18 SS G_CDS: -5.56 Total: -9.73 kcal Atomic # 6 Polarization: 1.15 SS G_CDS: -4.63 Total: -3.48 kcal Atomic # 7 Polarization: 0.00 SS G_CDS: -0.29 Total: -0.29 kcal Atomic # 8 Polarization: -3.16 SS G_CDS: -0.26 Total: -3.42 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.32 Total: -6.42 kcal Atomic # 16 Polarization: -0.16 SS G_CDS: -2.13 Total: -2.29 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -7.46 -12.75 -20.21 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_6739946.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.540 kcal (2) G-P(sol) polarization free energy of solvation -7.459 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.081 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.755 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.214 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.326 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds