Wall clock time and date at job start Sun Mar 7 2021 08:58:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.37936 * 120.07022 * 2 1 4 4 C 1.38384 * 120.14543 * 180.02562 * 3 2 1 5 5 C 1.50697 * 119.85511 * 180.02562 * 4 3 2 6 6 C 1.38338 * 120.28984 * 0.02562 * 4 3 2 7 7 C 1.50707 * 119.92691 * 179.97438 * 6 4 3 8 8 O 1.42903 * 109.46715 * 75.00462 * 7 6 4 9 9 Si 1.86300 * 109.46997 * 195.00057 * 7 6 4 10 10 C 1.37980 * 120.14491 * 359.97438 * 6 4 3 11 11 C 1.39553 * 119.85390 * 359.76511 * 10 6 4 12 12 C 1.47845 * 120.14765 * 180.25349 * 11 10 6 13 13 O 1.21549 * 120.00300 * 186.30154 * 12 11 10 14 14 N 1.34783 * 119.99691 * 6.29423 * 12 11 10 15 15 C 1.46503 * 119.99844 * 179.97438 * 14 12 11 16 16 H 1.09001 * 112.84675 * 23.80623 * 15 14 12 17 17 C 1.53779 * 113.61026 * 155.00437 * 15 14 12 18 18 C 1.53784 * 87.07933 * 139.98475 * 17 15 14 19 19 H 1.08995 * 113.61759 * 89.11276 * 18 17 15 20 20 C 1.50698 * 113.61443 * 219.93867 * 18 17 15 21 21 C 1.38238 * 120.00341 * 59.72159 * 20 18 17 22 22 C 1.38236 * 119.99728 * 179.76807 * 21 20 18 23 23 C 1.38232 * 120.00036 * 0.50976 * 22 21 20 24 24 C 1.38231 * 120.00215 * 359.74489 * 23 22 21 25 25 C 1.38234 * 120.00039 * 0.02562 * 24 23 22 26 26 C 1.53778 * 113.61498 * 252.50190 * 15 14 12 27 27 H 1.08997 * 109.47516 * 96.55534 * 1 2 3 28 28 H 1.09000 * 109.47243 * 336.54848 * 1 2 3 29 29 H 1.09002 * 109.46734 * 216.56139 * 1 2 3 30 30 H 1.08000 * 119.93275 * 0.03091 * 3 2 1 31 31 H 1.09000 * 109.47466 * 90.00058 * 5 4 3 32 32 H 1.09002 * 109.47250 * 210.00313 * 5 4 3 33 33 H 1.09001 * 109.47230 * 329.99446 * 5 4 3 34 34 H 1.08998 * 109.47165 * 315.00375 * 7 6 4 35 35 H 0.96694 * 114.00190 * 59.99718 * 8 7 6 36 36 H 1.48501 * 109.99781 * 58.68651 * 9 7 6 37 37 H 1.48502 * 109.99677 * 179.97438 * 9 7 6 38 38 H 1.08000 * 120.06914 * 180.02562 * 10 6 4 39 39 H 0.96997 * 119.99945 * 0.02562 * 14 12 11 40 40 H 1.08997 * 113.61613 * 254.52936 * 17 15 14 41 41 H 1.08996 * 113.61820 * 25.43696 * 17 15 14 42 42 H 1.07999 * 119.99831 * 0.02562 * 21 20 18 43 43 H 1.08001 * 119.99863 * 180.22857 * 22 21 20 44 44 H 1.08003 * 119.99837 * 179.72166 * 23 22 21 45 45 H 1.08002 * 120.00358 * 179.97438 * 24 23 22 46 46 H 1.08000 * 119.99963 * 179.97438 * 25 24 23 47 47 H 1.08997 * 113.61651 * 334.56948 * 26 15 14 48 48 H 1.09005 * 113.61119 * 105.47340 * 26 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1937 0.0000 4 6 3.5819 1.1955 -0.0005 5 6 4.3304 2.5035 0.0001 6 6 4.2813 0.0019 -0.0016 7 6 5.7883 0.0134 -0.0028 8 8 6.2629 0.3651 1.2985 9 14 6.4218 -1.6782 -0.4586 10 6 3.6020 -1.1991 -0.0016 11 6 2.2065 -1.2080 0.0044 12 6 1.4722 -2.4911 0.0101 13 8 0.2617 -2.4992 -0.1002 14 7 2.1450 -3.6521 0.1375 15 6 1.4173 -4.9236 0.1437 16 1 0.4505 -4.8603 -0.3557 17 6 2.2676 -6.1221 -0.3095 18 6 1.5815 -6.9297 0.8050 19 1 0.6590 -7.4157 0.4874 20 6 2.5129 -7.8623 1.5355 21 6 3.6159 -7.3580 2.1989 22 6 4.4676 -8.2131 2.8730 23 6 4.2221 -9.5734 2.8749 24 6 3.1221 -10.0782 2.2072 25 6 2.2678 -9.2227 1.5370 26 6 1.3554 -5.5912 1.5276 27 1 -0.3634 -0.1173 -1.0209 28 1 -0.3634 0.9428 0.4090 29 1 -0.3633 -0.8255 0.6122 30 1 1.6582 2.1290 0.0005 31 1 4.5113 2.8182 1.0278 32 1 5.2831 2.3772 -0.5143 33 1 3.7383 3.2612 -0.5131 34 1 6.1455 0.7432 -0.7293 35 1 5.9827 -0.2422 1.9967 36 1 5.9093 -2.0689 -1.7965 37 1 7.9069 -1.6798 -0.4639 38 1 4.1492 -2.1302 -0.0020 39 1 3.1109 -3.6456 0.2257 40 1 2.0281 -6.4726 -1.3134 41 1 3.3372 -5.9828 -0.1527 42 1 3.8100 -6.2956 2.1939 43 1 5.3273 -7.8187 3.3944 44 1 4.8900 -10.2419 3.3979 45 1 2.9305 -11.1411 2.2083 46 1 1.4085 -9.6172 1.0150 47 1 2.1756 -5.3068 2.1867 48 1 0.3794 -5.5131 2.0067 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_9599494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:59 Heat of formation + Delta-G solvation = 6.183510 kcal Electronic energy + Delta-G solvation = -28696.233770 eV Core-core repulsion = 24875.867296 eV Total energy + Delta-G solvation = -3820.366474 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.167 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -41.81824 -41.06489 -39.89622 -38.71004 -37.61565 -35.06669 -34.38755 -33.23358 -31.87634 -31.60921 -29.31427 -28.60445 -26.78772 -26.13400 -25.46289 -23.75474 -23.62405 -22.95160 -21.76436 -21.19913 -20.30662 -18.95493 -18.25284 -17.51908 -17.32759 -16.77213 -16.50062 -16.38946 -16.22922 -16.02270 -15.78910 -15.62357 -15.31373 -14.90847 -14.64710 -14.57327 -14.34078 -14.23771 -14.10296 -13.95573 -13.84291 -13.56182 -13.48337 -13.13117 -13.08266 -12.85069 -12.63208 -12.57473 -12.50196 -12.32323 -12.11079 -11.87782 -11.82552 -11.70965 -11.47156 -10.56654 -10.49253 -10.10161 -9.90144 -9.82868 -9.61318 -9.55248 -5.20504 -0.22336 0.16088 0.41804 0.49126 1.16771 1.52349 1.80973 1.87831 2.09859 2.67460 2.82200 3.34488 3.38601 3.45963 3.55782 3.62644 3.67014 3.68255 3.80748 3.86939 3.99162 4.08066 4.10195 4.15257 4.15348 4.23157 4.38481 4.49665 4.50472 4.52830 4.57290 4.61631 4.66923 4.69290 4.71461 4.74842 4.85746 4.91071 4.94143 4.96092 5.04241 5.06270 5.07477 5.12493 5.17928 5.30535 5.46341 5.51726 5.56551 5.58976 5.63076 5.71224 5.80772 6.08937 6.45381 6.47489 7.20750 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.008 4.008 3 C -0.132 4.132 4 C -0.025 4.025 5 C -0.121 4.121 6 C -0.138 4.138 7 C -0.064 4.064 8 O -0.536 6.536 9 Si 0.671 3.329 10 C -0.071 4.071 11 C -0.146 4.146 12 C 0.561 3.439 13 O -0.526 6.526 14 N -0.718 5.718 15 C 0.123 3.877 16 H 0.119 0.881 17 C -0.137 4.137 18 C -0.071 4.071 19 H 0.102 0.898 20 C -0.070 4.070 21 C -0.118 4.118 22 C -0.118 4.118 23 C -0.124 4.124 24 C -0.118 4.118 25 C -0.116 4.116 26 C -0.144 4.144 27 H 0.077 0.923 28 H 0.060 0.940 29 H 0.097 0.903 30 H 0.133 0.867 31 H 0.082 0.918 32 H 0.071 0.929 33 H 0.068 0.932 34 H 0.116 0.884 35 H 0.378 0.622 36 H -0.253 1.253 37 H -0.250 1.250 38 H 0.126 0.874 39 H 0.399 0.601 40 H 0.079 0.921 41 H 0.090 0.910 42 H 0.121 0.879 43 H 0.122 0.878 44 H 0.121 0.879 45 H 0.122 0.878 46 H 0.121 0.879 47 H 0.090 0.910 48 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.739 -1.623 1.503 2.814 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C -0.009 4.009 3 C -0.150 4.150 4 C -0.025 4.025 5 C -0.177 4.177 6 C -0.139 4.139 7 C -0.174 4.174 8 O -0.341 6.341 9 Si 0.572 3.428 10 C -0.089 4.089 11 C -0.149 4.149 12 C 0.350 3.650 13 O -0.404 6.404 14 N -0.369 5.369 15 C 0.018 3.982 16 H 0.137 0.863 17 C -0.175 4.175 18 C -0.090 4.090 19 H 0.121 0.879 20 C -0.070 4.070 21 C -0.136 4.136 22 C -0.136 4.136 23 C -0.143 4.143 24 C -0.136 4.136 25 C -0.134 4.134 26 C -0.183 4.183 27 H 0.096 0.904 28 H 0.079 0.921 29 H 0.116 0.884 30 H 0.151 0.849 31 H 0.100 0.900 32 H 0.090 0.910 33 H 0.087 0.913 34 H 0.133 0.867 35 H 0.226 0.774 36 H -0.178 1.178 37 H -0.175 1.175 38 H 0.144 0.856 39 H 0.234 0.766 40 H 0.098 0.902 41 H 0.108 0.892 42 H 0.139 0.861 43 H 0.140 0.860 44 H 0.139 0.861 45 H 0.140 0.860 46 H 0.139 0.861 47 H 0.109 0.891 48 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 1.608 -1.619 0.499 2.335 hybrid contribution 0.412 0.473 -0.153 0.646 sum 2.020 -1.146 0.346 2.348 Atomic orbital electron populations 1.21135 0.89639 1.03396 1.03882 1.20103 0.97044 0.91254 0.92518 1.21044 0.93350 0.97915 1.02716 1.19998 0.93452 0.95160 0.93900 1.20924 1.00047 0.93375 1.03361 1.20048 0.96153 0.92830 1.04844 1.24996 0.91605 1.11516 0.89329 1.86520 1.75794 1.55760 1.16063 0.95247 0.81528 0.80396 0.85617 1.20977 0.93100 0.96817 0.98019 1.19634 0.92979 0.93341 1.08957 1.18258 0.87152 0.83635 0.75958 1.90745 1.13584 1.86965 1.49098 1.45923 1.10594 1.05638 1.74765 1.22567 0.97390 0.80855 0.97340 0.86290 1.23473 1.00059 0.94683 0.99295 1.21324 0.98052 0.93497 0.96083 0.87941 1.19638 0.95645 0.93747 0.97957 1.20992 0.94766 0.99727 0.98079 1.21172 0.99475 0.93646 0.99265 1.21203 0.97778 0.95600 0.99671 1.21193 0.94994 0.99868 0.97514 1.21089 0.99745 0.92907 0.99662 1.23620 1.03409 0.94220 0.97030 0.90404 0.92136 0.88414 0.84938 0.89958 0.91031 0.91274 0.86679 0.77431 1.17750 1.17468 0.85641 0.76580 0.90211 0.89172 0.86064 0.85983 0.86103 0.86035 0.86066 0.89128 0.90476 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.20 8.75 36.00 0.31 0.12 16 2 C -0.01 -0.01 5.91 -104.23 -0.62 -0.63 16 3 C -0.13 -0.08 9.31 -39.64 -0.37 -0.45 16 4 C -0.02 -0.01 5.89 -104.53 -0.62 -0.62 16 5 C -0.12 0.09 9.53 36.00 0.34 0.43 16 6 C -0.14 0.05 5.25 -104.68 -0.55 -0.50 16 7 C -0.06 0.06 2.04 36.01 0.07 0.14 16 8 O -0.54 0.45 12.80 -35.23 -0.45 0.00 16 9 Si 0.67 -1.25 29.91 -169.99 -5.08 -6.33 16 10 C -0.07 0.06 8.13 -39.19 -0.32 -0.26 16 11 C -0.15 -0.16 5.87 -104.97 -0.62 -0.78 16 12 C 0.56 0.99 7.70 -12.33 -0.09 0.89 16 13 O -0.53 -2.47 12.94 5.32 0.07 -2.40 16 14 N -0.72 0.82 5.30 -53.96 -0.29 0.53 16 15 C 0.12 -0.15 4.24 -67.12 -0.28 -0.43 16 16 H 0.12 0.04 7.46 -51.93 -0.39 -0.35 16 17 C -0.14 0.32 7.30 -25.92 -0.19 0.14 16 18 C -0.07 0.12 3.98 -90.96 -0.36 -0.24 16 19 H 0.10 -0.21 8.09 -51.93 -0.42 -0.63 16 20 C -0.07 0.03 5.29 -104.62 -0.55 -0.53 16 21 C -0.12 0.09 8.60 -39.58 -0.34 -0.25 16 22 C -0.12 0.05 10.05 -39.58 -0.40 -0.35 16 23 C -0.12 0.00 10.05 -39.59 -0.40 -0.40 16 24 C -0.12 -0.02 10.05 -39.59 -0.40 -0.41 16 25 C -0.12 -0.01 9.71 -39.58 -0.38 -0.39 16 26 C -0.14 0.22 7.26 -25.92 -0.19 0.03 16 27 H 0.08 0.15 8.14 -51.93 -0.42 -0.27 16 28 H 0.06 0.01 8.04 -51.93 -0.42 -0.41 16 29 H 0.10 0.31 5.83 -51.93 -0.30 0.00 16 30 H 0.13 -0.12 8.06 -52.49 -0.42 -0.54 16 31 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 32 H 0.07 -0.05 6.22 -51.93 -0.32 -0.37 16 33 H 0.07 -0.11 8.08 -51.93 -0.42 -0.53 16 34 H 0.12 -0.07 6.48 -51.93 -0.34 -0.41 16 35 H 0.38 -1.72 8.70 45.56 0.40 -1.32 16 36 H -0.25 -0.18 7.11 56.52 0.40 0.23 16 37 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 38 H 0.13 -0.47 3.52 -52.49 -0.18 -0.65 16 39 H 0.40 -1.48 6.80 -40.82 -0.28 -1.76 16 40 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 41 H 0.09 -0.28 7.69 -51.93 -0.40 -0.68 16 42 H 0.12 -0.32 6.68 -52.49 -0.35 -0.68 16 43 H 0.12 -0.26 8.06 -52.49 -0.42 -0.68 16 44 H 0.12 -0.17 8.06 -52.48 -0.42 -0.60 16 45 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 46 H 0.12 -0.16 8.05 -52.49 -0.42 -0.58 16 47 H 0.09 -0.19 6.33 -51.93 -0.33 -0.51 16 48 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 LS Contribution 382.84 15.07 5.77 5.77 Total: 0.00 -7.09 382.84 -12.68 -19.77 By element: Atomic # 1 Polarization: -6.08 SS G_CDS: -6.75 Total: -12.83 kcal Atomic # 6 Polarization: 1.45 SS G_CDS: -5.94 Total: -4.50 kcal Atomic # 7 Polarization: 0.82 SS G_CDS: -0.29 Total: 0.53 kcal Atomic # 8 Polarization: -2.02 SS G_CDS: -0.38 Total: -2.40 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.08 Total: -6.33 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -7.09 -12.68 -19.77 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_9599494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.953 kcal (2) G-P(sol) polarization free energy of solvation -7.087 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.866 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.682 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.769 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.184 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds