Wall clock time and date at job start Sun Mar 7 2021 08:58:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.37936 * 120.07022 * 2 1 4 4 C 1.38384 * 120.14543 * 180.02562 * 3 2 1 5 5 C 1.50697 * 119.85511 * 180.02562 * 4 3 2 6 6 C 1.38338 * 120.28984 * 0.02562 * 4 3 2 7 7 C 1.50707 * 119.92691 * 179.97438 * 6 4 3 8 8 O 1.42903 * 109.46715 * 75.00462 * 7 6 4 9 9 Si 1.86300 * 109.46997 * 195.00057 * 7 6 4 10 10 C 1.37980 * 120.14491 * 359.97438 * 6 4 3 11 11 C 1.39553 * 119.85390 * 359.76511 * 10 6 4 12 12 C 1.47845 * 120.14765 * 180.25349 * 11 10 6 13 13 O 1.21549 * 120.00300 * 186.30154 * 12 11 10 14 14 N 1.34783 * 119.99691 * 6.29423 * 12 11 10 15 15 C 1.46503 * 119.99844 * 179.97438 * 14 12 11 16 16 H 1.09001 * 112.84675 * 23.80623 * 15 14 12 17 17 C 1.53779 * 113.61026 * 155.00437 * 15 14 12 18 18 C 1.53784 * 87.07933 * 139.98475 * 17 15 14 19 19 H 1.08995 * 113.61759 * 89.11276 * 18 17 15 20 20 C 1.50698 * 113.61443 * 219.93867 * 18 17 15 21 21 C 1.38238 * 120.00341 * 59.72159 * 20 18 17 22 22 C 1.38236 * 119.99728 * 179.76807 * 21 20 18 23 23 C 1.38232 * 120.00036 * 0.50976 * 22 21 20 24 24 C 1.38231 * 120.00215 * 359.74489 * 23 22 21 25 25 C 1.38234 * 120.00039 * 0.02562 * 24 23 22 26 26 C 1.53778 * 113.61498 * 252.50190 * 15 14 12 27 27 H 1.08997 * 109.47516 * 96.55534 * 1 2 3 28 28 H 1.09000 * 109.47243 * 336.54848 * 1 2 3 29 29 H 1.09002 * 109.46734 * 216.56139 * 1 2 3 30 30 H 1.08000 * 119.93275 * 0.03091 * 3 2 1 31 31 H 1.09000 * 109.47466 * 90.00058 * 5 4 3 32 32 H 1.09002 * 109.47250 * 210.00313 * 5 4 3 33 33 H 1.09001 * 109.47230 * 329.99446 * 5 4 3 34 34 H 1.08998 * 109.47165 * 315.00375 * 7 6 4 35 35 H 0.96694 * 114.00190 * 59.99718 * 8 7 6 36 36 H 1.48501 * 109.99781 * 58.68651 * 9 7 6 37 37 H 1.48502 * 109.99677 * 179.97438 * 9 7 6 38 38 H 1.08000 * 120.06914 * 180.02562 * 10 6 4 39 39 H 0.96997 * 119.99945 * 0.02562 * 14 12 11 40 40 H 1.08997 * 113.61613 * 254.52936 * 17 15 14 41 41 H 1.08996 * 113.61820 * 25.43696 * 17 15 14 42 42 H 1.07999 * 119.99831 * 0.02562 * 21 20 18 43 43 H 1.08001 * 119.99863 * 180.22857 * 22 21 20 44 44 H 1.08003 * 119.99837 * 179.72166 * 23 22 21 45 45 H 1.08002 * 120.00358 * 179.97438 * 24 23 22 46 46 H 1.08000 * 119.99963 * 179.97438 * 25 24 23 47 47 H 1.08997 * 113.61651 * 334.56948 * 26 15 14 48 48 H 1.09005 * 113.61119 * 105.47340 * 26 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1937 0.0000 4 6 3.5819 1.1955 -0.0005 5 6 4.3304 2.5035 0.0001 6 6 4.2813 0.0019 -0.0016 7 6 5.7883 0.0134 -0.0028 8 8 6.2629 0.3651 1.2985 9 14 6.4218 -1.6782 -0.4586 10 6 3.6020 -1.1991 -0.0016 11 6 2.2065 -1.2080 0.0044 12 6 1.4722 -2.4911 0.0101 13 8 0.2617 -2.4992 -0.1002 14 7 2.1450 -3.6521 0.1375 15 6 1.4173 -4.9236 0.1437 16 1 0.4505 -4.8603 -0.3557 17 6 2.2676 -6.1221 -0.3095 18 6 1.5815 -6.9297 0.8050 19 1 0.6590 -7.4157 0.4874 20 6 2.5129 -7.8623 1.5355 21 6 3.6159 -7.3580 2.1989 22 6 4.4676 -8.2131 2.8730 23 6 4.2221 -9.5734 2.8749 24 6 3.1221 -10.0782 2.2072 25 6 2.2678 -9.2227 1.5370 26 6 1.3554 -5.5912 1.5276 27 1 -0.3634 -0.1173 -1.0209 28 1 -0.3634 0.9428 0.4090 29 1 -0.3633 -0.8255 0.6122 30 1 1.6582 2.1290 0.0005 31 1 4.5113 2.8182 1.0278 32 1 5.2831 2.3772 -0.5143 33 1 3.7383 3.2612 -0.5131 34 1 6.1455 0.7432 -0.7293 35 1 5.9827 -0.2422 1.9967 36 1 5.9093 -2.0689 -1.7965 37 1 7.9069 -1.6798 -0.4639 38 1 4.1492 -2.1302 -0.0020 39 1 3.1109 -3.6456 0.2257 40 1 2.0281 -6.4726 -1.3134 41 1 3.3372 -5.9828 -0.1527 42 1 3.8100 -6.2956 2.1939 43 1 5.3273 -7.8187 3.3944 44 1 4.8900 -10.2419 3.3979 45 1 2.9305 -11.1411 2.2083 46 1 1.4085 -9.6172 1.0150 47 1 2.1756 -5.3068 2.1867 48 1 0.3794 -5.5131 2.0067 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16147626_9599494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:58 Heat of formation + Delta-G solvation = 12.369084 kcal Electronic energy + Delta-G solvation = -28695.965544 eV Core-core repulsion = 24875.867296 eV Total energy + Delta-G solvation = -3820.098248 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.167 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -41.82150 -40.99245 -39.89878 -38.65945 -37.55817 -35.09373 -34.39474 -33.20620 -31.78698 -31.53038 -29.32736 -28.58946 -26.64784 -26.07005 -25.43154 -23.72612 -23.54103 -22.91342 -21.75177 -21.19663 -20.22095 -18.91737 -18.17625 -17.47787 -17.29732 -16.70381 -16.48598 -16.30650 -16.18102 -16.05727 -15.73961 -15.57049 -15.26308 -14.92278 -14.61694 -14.55881 -14.26376 -14.16993 -14.08045 -13.90340 -13.86036 -13.46938 -13.39155 -13.09407 -13.05048 -12.88469 -12.62362 -12.52642 -12.43377 -12.22492 -12.14425 -11.83523 -11.73206 -11.58925 -11.38303 -10.65877 -10.42211 -10.11757 -9.89038 -9.75454 -9.61355 -9.48521 -5.08701 -0.25173 0.17003 0.49058 0.56465 1.27628 1.61463 1.75517 1.96292 2.11915 2.65132 2.89848 3.44752 3.49017 3.53065 3.64472 3.72564 3.75973 3.78507 3.81879 3.99069 4.10737 4.14869 4.19382 4.21056 4.25371 4.35449 4.44420 4.50722 4.56523 4.61032 4.67990 4.68143 4.75175 4.76277 4.79776 4.80398 4.88955 4.90015 5.01236 5.04546 5.07664 5.11729 5.16097 5.21790 5.25285 5.29828 5.48255 5.50795 5.60297 5.64914 5.70723 5.79719 5.80513 6.18778 6.50666 6.78154 7.18376 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.026 4.026 3 C -0.137 4.137 4 C -0.033 4.033 5 C -0.119 4.119 6 C -0.140 4.140 7 C -0.069 4.069 8 O -0.549 6.549 9 Si 0.762 3.238 10 C -0.063 4.063 11 C -0.158 4.158 12 C 0.557 3.443 13 O -0.563 6.563 14 N -0.704 5.704 15 C 0.120 3.880 16 H 0.100 0.900 17 C -0.126 4.126 18 C -0.068 4.068 19 H 0.102 0.898 20 C -0.076 4.076 21 C -0.123 4.123 22 C -0.127 4.127 23 C -0.140 4.140 24 C -0.133 4.133 25 C -0.132 4.132 26 C -0.140 4.140 27 H 0.068 0.932 28 H 0.072 0.928 29 H 0.080 0.920 30 H 0.143 0.857 31 H 0.082 0.918 32 H 0.071 0.929 33 H 0.076 0.924 34 H 0.111 0.889 35 H 0.395 0.605 36 H -0.284 1.284 37 H -0.295 1.295 38 H 0.153 0.847 39 H 0.413 0.587 40 H 0.080 0.920 41 H 0.105 0.895 42 H 0.142 0.858 43 H 0.138 0.862 44 H 0.130 0.870 45 H 0.129 0.871 46 H 0.128 0.872 47 H 0.101 0.899 48 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.039 -1.564 1.859 3.890 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.027 4.027 3 C -0.155 4.155 4 C -0.034 4.034 5 C -0.176 4.176 6 C -0.141 4.141 7 C -0.179 4.179 8 O -0.357 6.357 9 Si 0.668 3.332 10 C -0.081 4.081 11 C -0.161 4.161 12 C 0.346 3.654 13 O -0.444 6.444 14 N -0.355 5.355 15 C 0.016 3.984 16 H 0.118 0.882 17 C -0.164 4.164 18 C -0.087 4.087 19 H 0.120 0.880 20 C -0.077 4.077 21 C -0.140 4.140 22 C -0.145 4.145 23 C -0.158 4.158 24 C -0.151 4.151 25 C -0.150 4.150 26 C -0.178 4.178 27 H 0.086 0.914 28 H 0.091 0.909 29 H 0.099 0.901 30 H 0.161 0.839 31 H 0.101 0.899 32 H 0.090 0.910 33 H 0.095 0.905 34 H 0.128 0.872 35 H 0.245 0.755 36 H -0.210 1.210 37 H -0.223 1.223 38 H 0.170 0.830 39 H 0.251 0.749 40 H 0.099 0.901 41 H 0.123 0.877 42 H 0.160 0.840 43 H 0.156 0.844 44 H 0.148 0.852 45 H 0.147 0.853 46 H 0.146 0.854 47 H 0.119 0.881 48 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges 2.917 -1.570 0.884 3.428 hybrid contribution 0.056 0.466 -0.260 0.536 sum 2.973 -1.105 0.624 3.232 Atomic orbital electron populations 1.21026 0.90171 1.03276 1.03011 1.20221 0.96961 0.92026 0.93511 1.21175 0.93659 0.98036 1.02646 1.20216 0.93490 0.95948 0.93700 1.20931 1.00026 0.93120 1.03478 1.20194 0.96570 0.92824 1.04471 1.25126 0.91051 1.12224 0.89485 1.86491 1.75907 1.56787 1.16503 0.94240 0.77647 0.78267 0.83052 1.21170 0.92350 0.97849 0.96741 1.19697 0.93795 0.92886 1.09698 1.18447 0.86818 0.84481 0.75619 1.90732 1.15154 1.87497 1.51014 1.45825 1.11302 1.04909 1.73506 1.22519 0.97060 0.81125 0.97732 0.88192 1.23443 1.00585 0.93291 0.99089 1.21289 0.98003 0.93184 0.96203 0.87993 1.19800 0.96014 0.93735 0.98108 1.21264 0.94382 1.00820 0.97572 1.21458 1.00107 0.93595 0.99342 1.21450 0.98050 0.96302 0.99968 1.21404 0.95326 1.00494 0.97850 1.21306 1.00194 0.93436 1.00084 1.23599 1.03199 0.94212 0.96798 0.91358 0.90920 0.90149 0.83876 0.89902 0.91040 0.90522 0.87217 0.75525 1.21019 1.22272 0.82977 0.74873 0.90093 0.87668 0.84032 0.84402 0.85176 0.85292 0.85436 0.88078 0.91644 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.56 8.75 71.23 0.62 0.07 16 2 C -0.03 -0.10 5.91 -19.61 -0.12 -0.22 16 3 C -0.14 -0.18 9.31 22.23 0.21 0.03 16 4 C -0.03 -0.01 5.89 -19.81 -0.12 -0.13 16 5 C -0.12 0.23 9.53 71.23 0.68 0.91 16 6 C -0.14 0.21 5.25 -19.90 -0.10 0.11 16 7 C -0.07 0.21 2.04 71.24 0.15 0.36 16 8 O -0.55 1.61 12.80 -148.98 -1.91 -0.29 16 9 Si 0.76 -3.73 29.91 68.60 2.05 -1.68 16 10 C -0.06 0.17 8.13 22.53 0.18 0.36 16 11 C -0.16 -0.36 5.87 -20.09 -0.12 -0.48 16 12 C 0.56 2.27 7.70 86.79 0.67 2.94 16 13 O -0.56 -6.27 12.94 -3.87 -0.05 -6.32 16 14 N -0.70 1.93 5.30 -442.90 -2.35 -0.42 16 15 C 0.12 -0.29 4.24 45.52 0.19 -0.09 16 16 H 0.10 0.20 7.46 -2.39 -0.02 0.18 16 17 C -0.13 0.71 7.30 31.12 0.23 0.93 16 18 C -0.07 0.25 3.98 -11.01 -0.04 0.21 16 19 H 0.10 -0.38 8.09 -2.39 -0.02 -0.39 16 20 C -0.08 0.10 5.29 -19.86 -0.11 -0.01 16 21 C -0.12 0.33 8.60 22.27 0.19 0.52 16 22 C -0.13 0.21 10.05 22.27 0.22 0.44 16 23 C -0.14 0.02 10.05 22.27 0.22 0.24 16 24 C -0.13 -0.08 10.05 22.27 0.22 0.15 16 25 C -0.13 -0.04 9.71 22.27 0.22 0.17 16 26 C -0.14 0.46 7.26 31.12 0.23 0.68 16 27 H 0.07 0.41 8.14 -2.39 -0.02 0.39 16 28 H 0.07 0.09 8.04 -2.39 -0.02 0.07 16 29 H 0.08 0.68 5.83 -2.39 -0.01 0.66 16 30 H 0.14 -0.25 8.06 -2.91 -0.02 -0.27 16 31 H 0.08 -0.16 8.14 -2.39 -0.02 -0.18 16 32 H 0.07 -0.13 6.22 -2.39 -0.01 -0.15 16 33 H 0.08 -0.27 8.08 -2.39 -0.02 -0.29 16 34 H 0.11 -0.21 6.48 -2.39 -0.02 -0.22 16 35 H 0.39 -4.27 8.70 -74.06 -0.64 -4.92 16 36 H -0.28 -0.10 7.11 99.48 0.71 0.60 16 37 H -0.30 -0.83 7.11 99.48 0.71 -0.12 16 38 H 0.15 -1.44 3.52 -2.91 -0.01 -1.45 16 39 H 0.41 -3.78 6.80 -92.71 -0.63 -4.41 16 40 H 0.08 -0.43 8.14 -2.39 -0.02 -0.44 16 41 H 0.10 -0.88 7.69 -2.39 -0.02 -0.90 16 42 H 0.14 -1.07 6.68 -2.91 -0.02 -1.09 16 43 H 0.14 -0.77 8.06 -2.91 -0.02 -0.80 16 44 H 0.13 -0.39 8.06 -2.91 -0.02 -0.41 16 45 H 0.13 -0.27 8.06 -2.91 -0.02 -0.30 16 46 H 0.13 -0.26 8.05 -2.91 -0.02 -0.28 16 47 H 0.10 -0.55 6.33 -2.39 -0.02 -0.56 16 48 H 0.06 -0.04 8.14 -2.38 -0.02 -0.06 16 Total: 0.00 -18.02 382.84 1.13 -16.89 By element: Atomic # 1 Polarization: -15.12 SS G_CDS: -0.24 Total: -15.36 kcal Atomic # 6 Polarization: 3.56 SS G_CDS: 3.63 Total: 7.19 kcal Atomic # 7 Polarization: 1.93 SS G_CDS: -2.35 Total: -0.42 kcal Atomic # 8 Polarization: -4.66 SS G_CDS: -1.96 Total: -6.62 kcal Atomic # 14 Polarization: -3.73 SS G_CDS: 2.05 Total: -1.68 kcal Total: -18.02 1.13 -16.89 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_9599494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.255 kcal (2) G-P(sol) polarization free energy of solvation -18.019 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.236 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.133 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.886 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.369 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds