Wall clock time and date at job start Sun Mar 7 2021 08:59:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86299 * 109.47250 * 2 1 4 4 C 1.50694 * 109.47068 * 239.99874 * 2 1 3 5 5 C 1.34235 * 126.50112 * 104.96010 * 4 2 1 6 6 N 1.36831 * 109.93961 * 180.02562 * 5 4 2 7 7 C 1.46509 * 125.06402 * 179.97438 * 6 5 4 8 8 C 1.50697 * 109.46989 * 265.02723 * 7 6 5 9 9 O 1.21283 * 120.00134 * 359.97438 * 8 7 6 10 10 N 1.34776 * 119.99625 * 180.02562 * 8 7 6 11 11 C 1.46502 * 119.99809 * 180.02562 * 10 8 7 12 12 H 1.08998 * 112.85109 * 25.32754 * 11 10 8 13 13 C 1.53785 * 113.61615 * 156.52917 * 11 10 8 14 14 C 1.53781 * 87.08060 * 139.97867 * 13 11 10 15 15 H 1.08993 * 113.61690 * 89.20313 * 14 13 11 16 16 C 1.50708 * 113.61225 * 220.01837 * 14 13 11 17 17 C 1.38235 * 119.99576 * 59.72782 * 16 14 13 18 18 C 1.38241 * 119.99606 * 179.81315 * 17 16 14 19 19 C 1.38237 * 119.99841 * 0.41475 * 18 17 16 20 20 C 1.38237 * 120.00036 * 359.81753 * 19 18 17 21 21 C 1.38228 * 119.99942 * 240.00092 * 16 14 13 22 22 C 1.53787 * 113.61260 * 254.13206 * 11 10 8 23 23 C 1.37692 * 109.87595 * 0.02562 * 6 5 4 24 24 C 1.39079 * 133.51038 * 179.97438 * 23 6 5 25 25 C 1.37789 * 119.77774 * 180.02562 * 24 23 6 26 26 C 1.38795 * 120.66223 * 359.97438 * 25 24 23 27 27 C 1.36656 * 120.53345 * 359.97438 * 26 25 24 28 28 C 1.39595 * 119.76071 * 0.02562 * 27 26 25 29 29 H 0.96702 * 114.00361 * 59.99897 * 1 2 3 30 30 H 1.08996 * 109.47199 * 119.99915 * 2 1 3 31 31 H 1.48499 * 110.00185 * 60.00014 * 3 2 1 32 32 H 1.48502 * 110.00348 * 181.31988 * 3 2 1 33 33 H 1.08002 * 125.03146 * 0.03462 * 5 4 2 34 34 H 1.09001 * 109.46763 * 25.02457 * 7 6 5 35 35 H 1.08996 * 109.46577 * 145.02970 * 7 6 5 36 36 H 0.97001 * 120.00461 * 359.97438 * 10 8 7 37 37 H 1.09001 * 113.61237 * 254.52575 * 13 11 10 38 38 H 1.09002 * 113.61217 * 25.34635 * 13 11 10 39 39 H 1.07997 * 120.00314 * 359.97438 * 17 16 14 40 40 H 1.07997 * 120.00235 * 180.20880 * 18 17 16 41 41 H 1.07997 * 120.00110 * 179.79181 * 19 18 17 42 42 H 1.08000 * 119.99721 * 179.97438 * 20 19 18 43 43 H 1.08001 * 120.00339 * 359.97438 * 21 16 14 44 44 H 1.09004 * 113.61163 * 334.56991 * 22 11 10 45 45 H 1.09001 * 113.61383 * 105.46475 * 22 11 10 46 46 H 1.08003 * 120.11315 * 359.97438 * 24 23 6 47 47 H 1.08006 * 119.67010 * 180.02562 * 25 24 23 48 48 H 1.08000 * 119.72991 * 179.72896 * 26 25 24 49 49 H 1.07995 * 120.12118 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.4600 -0.1376 -2.3232 6 7 2.8018 -1.0990 -3.2350 7 6 3.4053 -0.8403 -4.5446 8 6 2.3247 -0.7840 -5.5934 9 8 1.1646 -0.9445 -5.2781 10 7 2.6475 -0.5561 -6.8820 11 6 1.5969 -0.5008 -7.9015 12 1 0.6259 -0.2193 -7.4939 13 6 1.9948 0.2989 -9.1534 14 6 1.2778 -0.7841 -9.9768 15 1 0.2194 -0.5803 -10.1387 16 6 2.0025 -1.1572 -11.2445 17 6 3.2876 -1.6627 -11.1826 18 6 3.9509 -2.0086 -12.3452 19 6 3.3323 -1.8408 -13.5699 20 6 2.0490 -1.3307 -13.6320 21 6 1.3843 -0.9885 -12.4692 22 6 1.5488 -1.7446 -8.8046 23 6 2.4928 -2.3457 -2.7387 24 6 2.6273 -3.6360 -3.2399 25 6 2.2132 -4.7106 -2.4834 26 6 1.6628 -4.5192 -1.2237 27 6 1.5224 -3.2601 -0.7114 28 6 1.9352 -2.1571 -1.4608 29 1 -0.3934 0.4417 -0.7650 30 1 1.7923 -0.5138 0.8900 31 1 1.5615 2.4679 1.2085 32 1 3.5346 1.7703 -0.0321 33 1 2.5958 0.9248 -2.4622 34 1 3.9362 0.1113 -4.5184 35 1 4.1050 -1.6403 -4.7865 36 1 3.5753 -0.4280 -7.1342 37 1 1.5212 1.2788 -9.2143 38 1 3.0708 0.3375 -9.3231 39 1 3.7724 -1.7900 -10.2260 40 1 4.9537 -2.4067 -12.2968 41 1 3.8517 -2.1078 -14.4784 42 1 1.5659 -1.1992 -14.5889 43 1 0.3817 -0.5897 -12.5178 44 1 2.5026 -2.2669 -8.8795 45 1 0.7157 -2.4122 -8.5844 46 1 3.0540 -3.7952 -4.2192 47 1 2.3188 -5.7120 -2.8741 48 1 1.3393 -5.3720 -0.6454 49 1 1.0928 -3.1189 0.2694 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:02 Heat of formation + Delta-G solvation = 56.328798 kcal Electronic energy + Delta-G solvation = -31204.448585 eV Core-core repulsion = 27064.378381 eV Total energy + Delta-G solvation = -4140.070203 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.162 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -42.48091 -41.50906 -40.28810 -38.79997 -37.96186 -37.46668 -34.88247 -33.97406 -32.00654 -31.80100 -31.23339 -30.11071 -28.98984 -26.88089 -26.35302 -25.37601 -23.73652 -23.60459 -22.88643 -22.24976 -21.69404 -20.65212 -20.42009 -18.58571 -18.48892 -18.18464 -17.61878 -17.25812 -16.90826 -16.53743 -16.32463 -16.29243 -15.98517 -15.80989 -15.50019 -15.36356 -15.19143 -14.76989 -14.59219 -14.43016 -14.38244 -14.27952 -14.03964 -13.94301 -13.67817 -13.64690 -13.42610 -13.09156 -12.67806 -12.58789 -12.45981 -12.40736 -12.10405 -12.00483 -11.93192 -11.79494 -11.66830 -11.56905 -11.04371 -10.40800 -10.21164 -10.19976 -9.88432 -9.62809 -9.01576 -8.51874 -5.00680 0.28596 0.36046 0.43545 0.80267 1.38263 1.39521 1.42996 1.68678 1.74070 2.04064 2.13485 2.76104 3.12060 3.28677 3.43089 3.47652 3.58148 3.59218 3.66774 3.77080 3.78770 3.81788 3.86763 3.92675 4.02973 4.05972 4.09486 4.17609 4.31961 4.37861 4.44141 4.50715 4.52487 4.58516 4.59230 4.66929 4.72003 4.80136 4.81702 4.88067 4.91181 4.98555 4.99547 5.05724 5.10310 5.26084 5.37208 5.50974 5.57711 5.64796 5.65329 5.81575 5.87021 5.90738 6.03328 6.16539 6.32362 6.37671 6.79244 7.00691 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.029 4.029 3 Si 0.682 3.318 4 C -0.198 4.198 5 C 0.069 3.931 6 N -0.466 5.466 7 C 0.090 3.910 8 C 0.492 3.508 9 O -0.512 6.512 10 N -0.719 5.719 11 C 0.124 3.876 12 H 0.117 0.883 13 C -0.134 4.134 14 C -0.070 4.070 15 H 0.103 0.897 16 C -0.070 4.070 17 C -0.118 4.118 18 C -0.118 4.118 19 C -0.124 4.124 20 C -0.117 4.117 21 C -0.115 4.115 22 C -0.145 4.145 23 C 0.109 3.891 24 C -0.128 4.128 25 C -0.097 4.097 26 C -0.146 4.146 27 C -0.066 4.066 28 C -0.087 4.087 29 H 0.377 0.623 30 H 0.110 0.890 31 H -0.254 1.254 32 H -0.256 1.256 33 H 0.171 0.829 34 H 0.123 0.877 35 H 0.117 0.883 36 H 0.402 0.598 37 H 0.080 0.920 38 H 0.089 0.911 39 H 0.120 0.880 40 H 0.122 0.878 41 H 0.122 0.878 42 H 0.122 0.878 43 H 0.122 0.878 44 H 0.089 0.911 45 H 0.076 0.924 46 H 0.114 0.886 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.160 2.585 -5.818 7.605 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.141 4.141 3 Si 0.584 3.416 4 C -0.206 4.206 5 C -0.056 4.056 6 N -0.149 5.149 7 C -0.036 4.036 8 C 0.276 3.724 9 O -0.386 6.386 10 N -0.371 5.371 11 C 0.019 3.981 12 H 0.135 0.865 13 C -0.172 4.172 14 C -0.089 4.089 15 H 0.121 0.879 16 C -0.070 4.070 17 C -0.136 4.136 18 C -0.136 4.136 19 C -0.142 4.142 20 C -0.135 4.135 21 C -0.133 4.133 22 C -0.183 4.183 23 C 0.004 3.996 24 C -0.148 4.148 25 C -0.116 4.116 26 C -0.165 4.165 27 C -0.084 4.084 28 C -0.091 4.091 29 H 0.225 0.775 30 H 0.127 0.873 31 H -0.179 1.179 32 H -0.181 1.181 33 H 0.188 0.812 34 H 0.141 0.859 35 H 0.135 0.865 36 H 0.236 0.764 37 H 0.098 0.902 38 H 0.108 0.892 39 H 0.138 0.862 40 H 0.140 0.860 41 H 0.140 0.860 42 H 0.141 0.859 43 H 0.140 0.860 44 H 0.108 0.892 45 H 0.095 0.905 46 H 0.132 0.868 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 4.017 2.853 -4.863 6.923 hybrid contribution 0.610 -0.607 -0.327 0.920 sum 4.627 2.246 -5.190 7.307 Atomic orbital electron populations 1.86489 1.17432 1.81830 1.48966 1.24325 0.84784 1.08734 0.96224 0.95249 0.80635 0.77880 0.87836 1.20645 1.09709 0.92400 0.97803 1.21502 1.01225 0.93770 0.89114 1.43201 1.53867 1.04622 1.13245 1.21606 0.94645 1.05951 0.81383 1.21030 0.90791 0.77009 0.83579 1.90813 1.19912 1.47041 1.80787 1.45959 1.10755 1.73510 1.06886 1.22564 0.92848 0.96804 0.85882 0.86499 1.23443 1.01539 0.98470 0.93795 1.21351 0.99726 0.96892 0.90950 0.87900 1.19625 0.94405 0.98907 0.94110 1.20968 0.94548 0.99765 0.98303 1.21171 0.99991 0.99848 0.92587 1.21210 0.95410 0.99606 0.97942 1.21204 0.95079 0.98780 0.98435 1.21093 1.00047 1.00205 0.92004 1.23641 1.03209 0.97066 0.94403 1.18160 1.01402 0.85852 0.94146 1.19949 1.05308 0.89290 1.00272 1.20825 0.98397 0.97948 0.94440 1.20669 1.02433 0.96947 0.96437 1.20306 0.97890 0.90957 0.99277 1.18946 1.03189 0.92820 0.94131 0.77548 0.87265 1.17897 1.18054 0.81225 0.85917 0.86524 0.76354 0.90166 0.89205 0.86249 0.86038 0.86044 0.85950 0.86002 0.89247 0.90513 0.86771 0.85744 0.85946 0.85986 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.33 12.88 -35.23 -0.45 -1.78 16 2 C -0.03 -0.05 3.06 36.00 0.11 0.06 16 3 Si 0.68 -0.29 30.75 -169.99 -5.23 -5.52 16 4 C -0.20 -0.50 5.57 -102.71 -0.57 -1.07 16 5 C 0.07 0.05 9.89 -16.73 -0.17 -0.12 16 6 N -0.47 -0.53 2.27 -115.71 -0.26 -0.79 16 7 C 0.09 -0.25 6.48 -5.19 -0.03 -0.28 16 8 C 0.49 -0.24 7.90 -10.99 -0.09 -0.33 16 9 O -0.51 -2.33 16.04 5.56 0.09 -2.24 16 10 N -0.72 2.27 5.36 -53.01 -0.28 1.99 16 11 C 0.12 -0.25 4.21 -67.11 -0.28 -0.54 16 12 H 0.12 -0.01 7.50 -51.93 -0.39 -0.40 16 13 C -0.13 0.42 7.29 -25.92 -0.19 0.23 16 14 C -0.07 0.14 3.98 -90.87 -0.36 -0.22 16 15 H 0.10 -0.23 8.09 -51.93 -0.42 -0.65 16 16 C -0.07 0.04 5.29 -104.62 -0.55 -0.51 16 17 C -0.12 0.10 8.60 -39.58 -0.34 -0.24 16 18 C -0.12 0.05 10.05 -39.58 -0.40 -0.35 16 19 C -0.12 0.01 10.05 -39.58 -0.40 -0.39 16 20 C -0.12 0.00 10.05 -39.58 -0.40 -0.39 16 21 C -0.12 0.01 9.71 -39.59 -0.38 -0.37 16 22 C -0.14 0.26 7.27 -25.83 -0.19 0.07 16 23 C 0.11 0.39 6.80 -83.99 -0.57 -0.18 16 24 C -0.13 -0.35 10.00 -39.43 -0.39 -0.74 16 25 C -0.10 -0.24 10.01 -39.54 -0.40 -0.63 16 26 C -0.15 -0.43 9.97 -39.95 -0.40 -0.83 16 27 C -0.07 -0.26 10.05 -39.65 -0.40 -0.66 16 28 C -0.09 -0.38 6.35 -105.13 -0.67 -1.05 16 29 H 0.38 -0.39 8.70 45.56 0.40 0.00 16 30 H 0.11 0.23 7.96 -51.93 -0.41 -0.18 16 31 H -0.25 -0.72 7.11 56.52 0.40 -0.32 16 32 H -0.26 -0.41 7.11 56.52 0.40 0.00 16 33 H 0.17 -0.50 6.35 -52.49 -0.33 -0.83 16 34 H 0.12 -0.74 8.12 -51.93 -0.42 -1.16 16 35 H 0.12 -0.54 8.14 -51.93 -0.42 -0.96 16 36 H 0.40 -2.47 8.71 -40.82 -0.36 -2.83 16 37 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 38 H 0.09 -0.34 7.69 -51.93 -0.40 -0.74 16 39 H 0.12 -0.31 6.68 -52.49 -0.35 -0.66 16 40 H 0.12 -0.25 8.06 -52.49 -0.42 -0.67 16 41 H 0.12 -0.19 8.06 -52.49 -0.42 -0.61 16 42 H 0.12 -0.19 8.06 -52.49 -0.42 -0.61 16 43 H 0.12 -0.18 8.05 -52.49 -0.42 -0.61 16 44 H 0.09 -0.20 6.34 -51.93 -0.33 -0.53 16 45 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 46 H 0.11 0.09 8.06 -52.48 -0.42 -0.33 16 47 H 0.12 0.03 8.06 -52.48 -0.42 -0.39 16 48 H 0.12 0.12 8.06 -52.49 -0.42 -0.30 16 49 H 0.12 0.38 8.06 -52.49 -0.42 -0.04 16 LS Contribution 409.12 15.07 6.17 6.17 Total: 0.00 -10.78 409.12 -13.91 -24.68 By element: Atomic # 1 Polarization: -7.10 SS G_CDS: -6.86 Total: -13.96 kcal Atomic # 6 Polarization: -1.48 SS G_CDS: -7.07 Total: -8.54 kcal Atomic # 7 Polarization: 1.74 SS G_CDS: -0.55 Total: 1.20 kcal Atomic # 8 Polarization: -3.66 SS G_CDS: -0.36 Total: -4.02 kcal Atomic # 14 Polarization: -0.29 SS G_CDS: -5.23 Total: -5.52 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -10.78 -13.91 -24.68 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.013 kcal (2) G-P(sol) polarization free energy of solvation -10.779 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 70.234 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.905 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.684 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.329 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds