Wall clock time and date at job start Sun Mar 7 2021 08:59:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.36773 * 125.79846 * 2 1 4 4 C 1.47262 * 126.94459 * 359.97438 * 3 2 1 5 5 O 1.21626 * 119.99853 * 359.71231 * 4 3 2 6 6 N 1.34774 * 119.99946 * 179.71006 * 4 3 2 7 7 C 1.46501 * 119.99738 * 179.97438 * 6 4 3 8 8 H 1.08998 * 112.84817 * 23.80487 * 7 6 4 9 9 C 1.53779 * 113.61277 * 155.00334 * 7 6 4 10 10 C 1.53777 * 87.08226 * 139.98111 * 9 7 6 11 11 H 1.08997 * 113.61707 * 89.20066 * 10 9 7 12 12 C 1.50706 * 113.61530 * 220.02125 * 10 9 7 13 13 C 1.38237 * 119.99744 * 238.47350 * 12 10 9 14 14 C 1.38235 * 119.99712 * 180.02562 * 13 12 10 15 15 C 1.38234 * 120.00220 * 359.94731 * 14 13 12 16 16 C 1.38233 * 120.00037 * 0.28719 * 15 14 13 17 17 C 1.38234 * 120.00223 * 58.48561 * 12 10 9 18 18 C 1.53783 * 87.17401 * 334.60942 * 10 9 7 19 19 C 1.46686 * 106.11299 * 179.72246 * 3 2 1 20 20 C 1.34488 * 106.33474 * 0.23426 * 19 3 2 21 21 C 1.50699 * 125.57426 * 179.97438 * 20 19 3 22 22 O 1.42900 * 109.47127 * 300.00622 * 21 20 19 23 23 Si 1.86299 * 109.47183 * 180.02562 * 21 20 19 24 24 N 1.34660 * 125.80447 * 180.12756 * 2 1 3 25 25 H 1.09001 * 109.47517 * 90.00280 * 1 2 3 26 26 H 1.09004 * 109.47511 * 210.00355 * 1 2 3 27 27 H 1.08998 * 109.47344 * 330.00398 * 1 2 3 28 28 H 0.97002 * 120.00149 * 0.02562 * 6 4 3 29 29 H 1.09003 * 113.61448 * 25.43061 * 9 7 6 30 30 H 1.09002 * 113.69074 * 254.54133 * 9 7 6 31 31 H 1.08005 * 120.00088 * 359.97438 * 13 12 10 32 32 H 1.07999 * 119.99770 * 179.97438 * 14 13 12 33 33 H 1.08002 * 119.99744 * 180.02562 * 15 14 13 34 34 H 1.07998 * 120.00391 * 179.72199 * 16 15 14 35 35 H 1.07998 * 119.99975 * 0.02562 * 17 12 10 36 36 H 1.08998 * 113.61446 * 139.94208 * 18 10 9 37 37 H 1.09011 * 113.61246 * 270.84197 * 18 10 9 38 38 H 1.08000 * 126.83615 * 180.26525 * 19 3 2 39 39 H 1.08998 * 109.46663 * 60.00632 * 21 20 19 40 40 H 0.96704 * 113.99729 * 179.97438 * 22 21 20 41 41 H 1.48509 * 109.99851 * 60.00218 * 23 21 20 42 42 H 1.48498 * 110.00002 * 181.31976 * 23 21 20 43 43 H 0.97006 * 124.84787 * 0.06539 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8702 2.5157 -0.0005 5 8 0.6839 2.7839 -0.0063 6 7 2.7849 3.5054 0.0055 7 6 2.3502 4.9045 0.0044 8 1 1.3448 5.0356 0.4044 9 6 3.3837 5.8711 0.6064 10 6 3.0082 6.8492 -0.5192 11 1 2.1833 7.5140 -0.2629 12 6 4.1897 7.5806 -1.1026 13 6 4.2287 8.9622 -1.0769 14 6 5.3121 9.6330 -1.6125 15 6 6.3571 8.9224 -2.1728 16 6 6.3159 7.5410 -2.2028 17 6 5.2343 6.8700 -1.6636 18 6 2.5778 5.6213 -1.3390 19 6 3.6881 0.6152 0.0068 20 6 3.6096 -0.7274 0.0050 21 6 4.7819 -1.6742 0.0098 22 8 5.5815 -1.4481 -1.1528 23 14 4.1615 -3.4308 0.0041 24 7 2.2948 -1.0921 -0.0024 25 1 -0.3634 -0.0001 -1.0276 26 1 -0.3634 -0.8900 0.5139 27 1 -0.3634 0.8900 0.5138 28 1 3.7310 3.2915 0.0097 29 1 4.4094 5.5074 0.5447 30 1 3.1207 6.2291 1.6018 31 1 3.4122 9.5174 -0.6392 32 1 5.3424 10.7124 -1.5929 33 1 7.2038 9.4466 -2.5909 34 1 7.1302 6.9859 -2.6446 35 1 5.2035 5.7906 -1.6842 36 1 1.6639 5.7774 -1.9121 37 1 3.3829 5.1892 -1.9336 38 1 4.5889 1.2110 0.0127 39 1 5.3830 -1.5037 0.9029 40 1 6.3560 -2.0238 -1.2156 41 1 3.3407 -3.6757 -1.2091 42 1 5.3076 -4.3744 0.0408 43 1 1.9734 -2.0074 -0.0054 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16147626_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:05 Heat of formation + Delta-G solvation = 26.453977 kcal Electronic energy + Delta-G solvation = -24970.748133 eV Core-core repulsion = 21369.598500 eV Total energy + Delta-G solvation = -3601.149633 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.146 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.41962 -41.22885 -39.81366 -38.46407 -37.92856 -34.52588 -32.85476 -32.26247 -31.77164 -31.32097 -29.02410 -26.66281 -26.43209 -25.16482 -23.64500 -23.32526 -21.98053 -21.34008 -20.88729 -19.90962 -18.78104 -18.20074 -18.00483 -17.04010 -16.86385 -16.34037 -16.24884 -15.84720 -15.78651 -15.39941 -15.12175 -14.91870 -14.57796 -14.53473 -14.24264 -14.13016 -14.07431 -13.82140 -13.61576 -13.44033 -13.42278 -12.99970 -12.93950 -12.56088 -12.45167 -12.25726 -12.16585 -11.73296 -11.62191 -11.36350 -10.80232 -10.50877 -9.93244 -9.77012 -9.72508 -9.48985 -9.07455 -5.27084 0.48242 0.55159 0.83412 0.96756 1.28063 1.32320 1.67991 2.00400 2.51323 2.71322 2.89095 3.25646 3.53222 3.63297 3.75474 3.80350 3.89291 3.96788 4.07786 4.12774 4.15768 4.20120 4.25442 4.28716 4.30976 4.55408 4.60943 4.64678 4.74335 4.74520 4.77883 4.82013 4.85009 5.01742 5.06060 5.08769 5.14077 5.20105 5.26204 5.38151 5.62777 5.68411 5.71871 5.77592 5.79801 5.93072 6.15178 6.24152 6.39599 6.78766 7.55204 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C 0.125 3.875 3 C -0.242 4.242 4 C 0.595 3.405 5 O -0.549 6.549 6 N -0.717 5.717 7 C 0.126 3.874 8 H 0.117 0.883 9 C -0.136 4.136 10 C -0.072 4.072 11 H 0.102 0.898 12 C -0.069 4.069 13 C -0.116 4.116 14 C -0.118 4.118 15 C -0.125 4.125 16 C -0.118 4.118 17 C -0.117 4.117 18 C -0.145 4.145 19 C -0.126 4.126 20 C 0.017 3.983 21 C -0.042 4.042 22 O -0.531 6.531 23 Si 0.665 3.335 24 N -0.544 5.544 25 H 0.080 0.920 26 H 0.067 0.933 27 H 0.104 0.896 28 H 0.400 0.600 29 H 0.088 0.912 30 H 0.078 0.922 31 H 0.122 0.878 32 H 0.122 0.878 33 H 0.121 0.879 34 H 0.121 0.879 35 H 0.121 0.879 36 H 0.075 0.925 37 H 0.088 0.912 38 H 0.145 0.855 39 H 0.088 0.912 40 H 0.383 0.617 41 H -0.250 1.250 42 H -0.250 1.250 43 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.418 -2.814 2.733 4.609 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.007 3.993 3 C -0.251 4.251 4 C 0.385 3.615 5 O -0.428 6.428 6 N -0.367 5.367 7 C 0.021 3.979 8 H 0.135 0.865 9 C -0.174 4.174 10 C -0.090 4.090 11 H 0.120 0.880 12 C -0.069 4.069 13 C -0.134 4.134 14 C -0.136 4.136 15 C -0.143 4.143 16 C -0.136 4.136 17 C -0.135 4.135 18 C -0.184 4.184 19 C -0.151 4.151 20 C -0.091 4.091 21 C -0.152 4.152 22 O -0.338 6.338 23 Si 0.564 3.436 24 N -0.144 5.144 25 H 0.099 0.901 26 H 0.086 0.914 27 H 0.123 0.877 28 H 0.235 0.765 29 H 0.106 0.894 30 H 0.097 0.903 31 H 0.140 0.860 32 H 0.140 0.860 33 H 0.139 0.861 34 H 0.139 0.861 35 H 0.139 0.861 36 H 0.094 0.906 37 H 0.107 0.893 38 H 0.163 0.837 39 H 0.106 0.894 40 H 0.232 0.768 41 H -0.174 1.174 42 H -0.173 1.173 43 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges 1.106 -3.099 2.200 3.959 hybrid contribution 1.713 -0.374 -0.724 1.897 sum 2.819 -3.473 1.477 4.710 Atomic orbital electron populations 1.20652 0.86465 1.04624 1.03866 1.20388 0.93767 0.85144 1.00040 1.20100 0.92970 0.92094 1.19965 1.17337 0.85301 0.84045 0.74845 1.90743 1.16603 1.84385 1.51075 1.45731 1.09659 1.05430 1.75887 1.22507 0.99739 0.79065 0.96591 0.86475 1.23448 0.99682 0.95561 0.98693 1.21341 0.96011 0.95053 0.96639 0.87987 1.19665 0.95360 0.93511 0.98331 1.21091 0.98566 0.93782 0.99998 1.21185 0.94072 1.00008 0.98342 1.21190 0.98809 0.94391 0.99933 1.21166 0.98281 0.94597 0.99573 1.20999 0.93824 0.99832 0.98867 1.23650 1.02399 0.95096 0.97208 1.21741 0.95652 0.92515 1.05186 1.19082 0.83270 0.94337 1.12384 1.23977 0.92631 1.07744 0.90877 1.86609 1.41350 1.62470 1.43389 0.95694 0.85732 0.74344 0.87801 1.41635 1.05366 1.08533 1.58826 0.90103 0.91366 0.87725 0.76529 0.89357 0.90316 0.86038 0.86038 0.86132 0.86085 0.86143 0.90608 0.89344 0.83691 0.89402 0.76835 1.17424 1.17341 0.74740 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.03 9.88 36.00 0.36 0.32 16 2 C 0.13 0.21 7.17 -81.88 -0.59 -0.38 16 3 C -0.24 -0.67 6.29 -103.35 -0.65 -1.32 16 4 C 0.60 2.25 7.81 -12.59 -0.10 2.15 16 5 O -0.55 -3.59 14.41 5.25 0.08 -3.51 16 6 N -0.72 -0.76 5.35 -54.05 -0.29 -1.05 16 7 C 0.13 0.08 4.24 -67.03 -0.28 -0.21 16 8 H 0.12 0.23 7.46 -51.93 -0.39 -0.15 16 9 C -0.14 0.11 7.30 -25.92 -0.19 -0.08 16 10 C -0.07 0.02 3.98 -90.96 -0.36 -0.34 16 11 H 0.10 -0.08 8.09 -51.93 -0.42 -0.50 16 12 C -0.07 -0.07 5.29 -104.62 -0.55 -0.62 16 13 C -0.12 -0.13 9.71 -39.58 -0.38 -0.51 16 14 C -0.12 -0.13 10.05 -39.58 -0.40 -0.53 16 15 C -0.13 -0.14 10.05 -39.58 -0.40 -0.53 16 16 C -0.12 -0.12 10.05 -39.58 -0.40 -0.52 16 17 C -0.12 -0.10 8.54 -39.58 -0.34 -0.44 16 18 C -0.14 -0.05 7.27 -25.82 -0.19 -0.24 16 19 C -0.13 -0.18 10.43 -37.50 -0.39 -0.57 16 20 C 0.02 0.01 6.14 -81.87 -0.50 -0.49 16 21 C -0.04 0.06 2.97 36.00 0.11 0.16 16 22 O -0.53 0.03 12.84 -35.23 -0.45 -0.42 16 23 Si 0.66 -1.63 30.94 -169.99 -5.26 -6.89 16 24 N -0.54 0.05 5.41 -5.42 -0.03 0.02 16 25 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 26 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 27 H 0.10 0.22 6.47 -51.93 -0.34 -0.12 16 28 H 0.40 -0.37 7.85 -40.82 -0.32 -0.69 16 29 H 0.09 -0.11 7.62 -51.93 -0.40 -0.50 16 30 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 31 H 0.12 -0.05 8.05 -52.48 -0.42 -0.47 16 32 H 0.12 -0.07 8.06 -52.49 -0.42 -0.49 16 33 H 0.12 -0.06 8.06 -52.49 -0.42 -0.49 16 34 H 0.12 -0.07 8.06 -52.49 -0.42 -0.50 16 35 H 0.12 -0.06 6.73 -52.49 -0.35 -0.41 16 36 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 37 H 0.09 0.03 6.39 -51.92 -0.33 -0.30 16 38 H 0.15 -0.03 7.70 -52.49 -0.40 -0.44 16 39 H 0.09 -0.28 7.96 -51.93 -0.41 -0.69 16 40 H 0.38 -1.59 8.74 45.56 0.40 -1.19 16 41 H -0.25 -0.17 7.11 56.52 0.40 0.23 16 42 H -0.25 0.09 7.11 56.52 0.40 0.49 16 43 H 0.41 -1.12 6.70 -40.82 -0.27 -1.39 16 LS Contribution 356.84 15.07 5.38 5.38 Total: 0.00 -8.38 356.84 -11.65 -20.04 By element: Atomic # 1 Polarization: -3.60 SS G_CDS: -5.82 Total: -9.42 kcal Atomic # 6 Polarization: 1.11 SS G_CDS: -5.26 Total: -4.15 kcal Atomic # 7 Polarization: -0.71 SS G_CDS: -0.32 Total: -1.03 kcal Atomic # 8 Polarization: -3.55 SS G_CDS: -0.38 Total: -3.93 kcal Atomic # 14 Polarization: -1.63 SS G_CDS: -5.26 Total: -6.89 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -8.38 -11.65 -20.04 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16147626_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.491 kcal (2) G-P(sol) polarization free energy of solvation -8.383 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.107 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.653 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.037 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.454 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds