Wall clock time and date at job start Sun Mar 7 2021 07:01:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45199 * 109.46818 * 2 1 4 4 C 1.34232 * 116.99946 * 180.02562 * 3 2 1 5 5 O 1.20820 * 120.00068 * 0.02562 * 4 3 2 6 6 C 1.50707 * 120.00279 * 180.02562 * 4 3 2 7 7 H 1.09000 * 112.84513 * 311.20336 * 6 4 3 8 8 C 1.53784 * 113.61088 * 82.50133 * 6 4 3 9 9 C 1.53788 * 87.07502 * 139.98550 * 8 6 4 10 10 O 1.42892 * 113.61256 * 89.11908 * 9 8 6 11 11 C 1.53004 * 113.68837 * 220.00628 * 9 8 6 12 12 N 1.46499 * 109.46951 * 282.54059 * 11 9 8 13 13 C 1.34779 * 119.99664 * 179.97438 * 12 11 9 14 14 O 1.21286 * 120.00171 * 0.02562 * 13 12 11 15 15 C 1.50701 * 119.99875 * 179.97438 * 13 12 11 16 16 C 1.53000 * 109.47068 * 65.00492 * 15 13 12 17 17 O 1.42901 * 109.46976 * 184.99974 * 15 13 12 18 18 C 1.35905 * 116.99784 * 155.32523 * 17 15 13 19 19 C 1.38735 * 120.05523 * 5.08836 * 18 17 15 20 20 C 1.38138 * 119.94150 * 179.74580 * 19 18 17 21 21 C 1.38266 * 120.05771 * 0.50558 * 20 19 18 22 22 C 1.50700 * 119.94527 * 179.74920 * 21 20 19 23 23 O 1.42904 * 109.47413 * 120.02121 * 22 21 20 24 24 Si 1.86300 * 109.47266 * 0.02562 * 22 21 20 25 25 C 1.38266 * 120.11029 * 359.76869 * 21 20 19 26 26 C 1.38143 * 120.05694 * 359.97438 * 25 21 20 27 27 C 1.53776 * 113.61702 * 180.02562 * 6 4 3 28 28 H 1.09006 * 109.46992 * 180.02562 * 1 2 3 29 29 H 1.08999 * 109.47647 * 59.99544 * 1 2 3 30 30 H 1.09004 * 109.47030 * 299.99471 * 1 2 3 31 31 H 1.08999 * 109.47647 * 120.00456 * 2 1 3 32 32 H 1.09004 * 109.47030 * 240.00529 * 2 1 3 33 33 H 1.08996 * 113.61439 * 254.53055 * 8 6 4 34 34 H 1.08996 * 113.61397 * 25.43917 * 8 6 4 35 35 H 0.96699 * 114.00403 * 82.50125 * 10 9 8 36 36 H 1.09004 * 109.46979 * 42.53630 * 11 9 8 37 37 H 1.08993 * 109.46861 * 162.53669 * 11 9 8 38 38 H 0.96997 * 120.00631 * 359.97438 * 12 11 9 39 39 H 1.08997 * 109.47163 * 305.00359 * 15 13 12 40 40 H 1.08998 * 109.46731 * 300.00040 * 16 15 13 41 41 H 1.09005 * 109.47242 * 59.99568 * 16 15 13 42 42 H 1.08999 * 109.47436 * 179.97438 * 16 15 13 43 43 H 1.07998 * 120.02339 * 359.97438 * 19 18 17 44 44 H 1.08005 * 119.97400 * 180.23261 * 20 19 18 45 45 H 1.08996 * 109.47291 * 240.01924 * 22 21 20 46 46 H 0.96693 * 114.00227 * 180.02562 * 23 22 21 47 47 H 1.48500 * 109.99951 * 60.00264 * 24 22 21 48 48 H 1.48498 * 110.00033 * 181.31825 * 24 22 21 49 49 H 1.08000 * 119.96909 * 179.97438 * 25 21 20 50 50 H 1.07997 * 120.02686 * 179.97438 * 26 25 21 51 51 H 1.09000 * 113.61261 * 334.56659 * 27 6 4 52 52 H 1.08997 * 113.61460 * 105.38862 * 27 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5449 -0.0005 5 8 4.0807 0.5868 -0.0015 6 6 3.9207 2.9375 0.0000 7 1 3.4706 3.5820 -0.7551 8 6 3.9868 3.5762 1.3974 9 6 5.3568 4.1420 0.9876 10 8 5.2816 5.4200 0.3528 11 6 6.4009 4.0942 2.1050 12 7 6.1487 5.1800 3.0556 13 6 6.9483 5.3346 4.1296 14 8 7.8768 4.5751 4.3087 15 6 6.6893 6.4518 5.1072 16 6 5.3442 6.2224 5.7992 17 8 7.7300 6.4790 6.0861 18 6 7.9611 7.6650 6.7081 19 6 7.1349 8.7518 6.4611 20 6 7.3688 9.9547 7.0986 21 6 8.4315 10.0792 7.9743 22 6 8.6877 11.3944 8.6641 23 8 8.6120 11.2126 10.0795 24 14 7.4069 12.6366 8.1283 25 6 9.2598 8.9992 8.2179 26 6 9.0270 7.7926 7.5869 27 6 5.4581 2.9683 -0.0013 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3633 0.5138 0.8901 31 1 1.8934 -0.5139 0.8899 32 1 1.8933 -0.5138 -0.8901 33 1 3.2298 4.3426 1.5635 34 1 4.0394 2.8491 2.2077 35 1 5.2177 6.1623 0.9693 36 1 6.3364 3.1366 2.6217 37 1 7.3966 4.2099 1.6770 38 1 5.4064 5.7877 2.9122 39 1 6.6664 7.4026 4.5747 40 1 4.5504 6.2016 5.0525 41 1 5.3670 5.2715 6.3317 42 1 5.1570 7.0302 6.5066 43 1 6.3074 8.6562 5.7737 44 1 6.7237 10.8000 6.9095 45 1 9.6802 11.7574 8.3971 46 1 8.7667 12.0200 10.5886 47 1 6.0494 12.1532 8.4870 48 1 7.6674 13.9467 8.7771 49 1 10.0895 9.0992 8.9020 50 1 9.6745 6.9495 7.7772 51 1 5.9130 2.0749 0.4265 52 1 5.8885 3.2427 -0.9644 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16466198_10157680.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:01:26 Heat of formation + Delta-G solvation = -174.349067 kcal Electronic energy + Delta-G solvation = -34428.552248 eV Core-core repulsion = 29554.769327 eV Total energy + Delta-G solvation = -4873.782920 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.20622 -41.73156 -40.84748 -40.13255 -38.94823 -37.67040 -37.34015 -36.09936 -35.56021 -33.53745 -32.73172 -31.92402 -31.69302 -29.68587 -27.20084 -26.84560 -26.41471 -25.19579 -24.10893 -23.72406 -22.33851 -21.96887 -21.51353 -20.90308 -19.53055 -19.33084 -18.65769 -18.52020 -17.73292 -17.58356 -17.40394 -17.38742 -16.95872 -16.78138 -16.60207 -16.38479 -15.98014 -15.78158 -15.55365 -15.19697 -15.16193 -14.84158 -14.59666 -14.51315 -14.33530 -14.26070 -14.00542 -13.95283 -13.79482 -13.66368 -13.60319 -13.44204 -13.28440 -13.01490 -12.97926 -12.84649 -12.64870 -12.48122 -12.40612 -12.13785 -11.93165 -11.83738 -11.69382 -11.54517 -11.48030 -11.07603 -10.89779 -10.51265 -10.39144 -10.01114 -9.17858 -5.01124 0.30102 0.32431 1.13430 1.25396 1.33593 1.38680 1.55602 1.62286 1.91979 2.35025 2.61641 2.63214 2.96511 3.16576 3.27714 3.31382 3.32478 3.38577 3.50608 3.65114 3.76455 3.80087 3.82003 3.90261 3.91931 3.97277 4.03810 4.18283 4.20692 4.26225 4.27361 4.34753 4.40149 4.41448 4.43738 4.50790 4.58063 4.65177 4.66631 4.69626 4.76714 4.78217 4.85325 4.95571 4.96974 4.98748 5.03815 5.18929 5.26568 5.44189 5.53694 5.68818 6.05588 6.24176 6.32601 6.42602 6.72454 6.95261 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.356 6.356 4 C 0.470 3.530 5 O -0.504 6.504 6 C -0.102 4.102 7 H 0.132 0.868 8 C -0.145 4.145 9 C 0.098 3.902 10 O -0.529 6.529 11 C 0.105 3.895 12 N -0.729 5.729 13 C 0.521 3.479 14 O -0.505 6.505 15 C 0.067 3.933 16 C -0.179 4.179 17 O -0.283 6.283 18 C 0.134 3.866 19 C -0.207 4.207 20 C -0.073 4.073 21 C -0.110 4.110 22 C -0.071 4.071 23 O -0.537 6.537 24 Si 0.679 3.321 25 C -0.049 4.049 26 C -0.145 4.145 27 C -0.101 4.101 28 H 0.081 0.919 29 H 0.068 0.932 30 H 0.067 0.933 31 H 0.071 0.929 32 H 0.071 0.929 33 H 0.091 0.909 34 H 0.098 0.902 35 H 0.378 0.622 36 H 0.086 0.914 37 H 0.085 0.915 38 H 0.398 0.602 39 H 0.103 0.897 40 H 0.079 0.921 41 H 0.077 0.923 42 H 0.080 0.920 43 H 0.134 0.866 44 H 0.130 0.870 45 H 0.076 0.924 46 H 0.379 0.621 47 H -0.256 1.256 48 H -0.261 1.261 49 H 0.133 0.867 50 H 0.136 0.864 51 H 0.115 0.885 52 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.813 4.928 -2.419 7.301 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.273 6.273 4 C 0.313 3.687 5 O -0.391 6.391 6 C -0.121 4.121 7 H 0.150 0.850 8 C -0.183 4.183 9 C 0.056 3.944 10 O -0.335 6.335 11 C -0.019 4.019 12 N -0.385 5.385 13 C 0.305 3.695 14 O -0.378 6.378 15 C 0.007 3.993 16 C -0.236 4.236 17 O -0.196 6.196 18 C 0.089 3.911 19 C -0.226 4.226 20 C -0.091 4.091 21 C -0.111 4.111 22 C -0.181 4.181 23 O -0.344 6.344 24 Si 0.580 3.420 25 C -0.068 4.068 26 C -0.164 4.164 27 C -0.138 4.138 28 H 0.100 0.900 29 H 0.087 0.913 30 H 0.086 0.914 31 H 0.089 0.911 32 H 0.090 0.910 33 H 0.110 0.890 34 H 0.117 0.883 35 H 0.226 0.774 36 H 0.105 0.895 37 H 0.103 0.897 38 H 0.233 0.767 39 H 0.120 0.880 40 H 0.098 0.902 41 H 0.096 0.904 42 H 0.099 0.901 43 H 0.152 0.848 44 H 0.148 0.852 45 H 0.094 0.906 46 H 0.227 0.773 47 H -0.180 1.180 48 H -0.187 1.187 49 H 0.151 0.849 50 H 0.154 0.846 51 H 0.133 0.867 52 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -4.556 3.395 -2.727 6.302 hybrid contribution -0.248 0.704 1.488 1.664 sum -4.803 4.099 -1.239 6.435 Atomic orbital electron populations 1.21822 0.92305 1.03290 1.03649 1.23096 0.95634 0.79833 1.02785 1.86516 1.24353 1.32773 1.83668 1.23521 0.80718 0.92299 0.72195 1.90691 1.60508 1.42916 1.45033 1.22413 0.97270 0.91068 1.01358 0.84988 1.23667 0.98190 1.01031 0.95412 1.22379 0.93622 0.85537 0.92862 1.86610 1.96250 1.14334 1.36322 1.21980 0.99761 0.91221 0.88906 1.45727 1.33313 1.33930 1.25508 1.20090 0.82386 0.85695 0.81326 1.90804 1.29134 1.44114 1.73721 1.22173 0.88602 0.98838 0.89712 1.22370 0.94062 1.04955 1.02217 1.86233 1.52505 1.29766 1.51079 1.19062 0.94403 0.84334 0.93329 1.21158 1.02488 0.93447 1.05484 1.20709 0.95840 0.96807 0.95697 1.19167 0.97308 0.95088 0.99489 1.24734 1.08134 1.01533 0.83705 1.86592 1.94249 1.37464 1.16075 0.95204 0.78469 0.76535 0.91759 1.20834 0.98422 0.90917 0.96578 1.20519 0.97803 0.99064 0.99012 1.23062 0.93264 0.96609 1.00885 0.89982 0.91337 0.91394 0.91102 0.91041 0.89019 0.88306 0.77366 0.89541 0.89653 0.76719 0.87989 0.90209 0.90401 0.90126 0.84839 0.85245 0.90609 0.77281 1.18020 1.18663 0.84907 0.84632 0.86690 0.88653 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.29 10.29 37.16 0.38 0.67 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.36 -0.46 10.22 -39.26 -0.40 -0.86 16 4 C 0.47 0.70 7.48 36.01 0.27 0.97 16 5 O -0.50 -2.19 15.65 -18.75 -0.29 -2.48 16 6 C -0.10 0.14 4.19 -90.96 -0.38 -0.24 16 7 H 0.13 -0.29 8.14 -51.93 -0.42 -0.71 16 8 C -0.15 0.47 7.02 -25.91 -0.18 0.29 16 9 C 0.10 -0.29 1.41 -89.78 -0.13 -0.42 16 10 O -0.53 1.57 13.41 -35.23 -0.47 1.09 16 11 C 0.10 -0.21 5.26 -4.04 -0.02 -0.23 16 12 N -0.73 2.30 5.28 -60.29 -0.32 1.98 16 13 C 0.52 0.31 7.18 -10.98 -0.08 0.23 16 14 O -0.51 -2.95 16.51 -14.31 -0.24 -3.19 16 15 C 0.07 -0.08 2.64 -27.88 -0.07 -0.15 16 16 C -0.18 0.55 9.12 37.16 0.34 0.89 16 17 O -0.28 -0.74 9.34 -39.30 -0.37 -1.11 16 18 C 0.13 0.24 6.60 -39.22 -0.26 -0.02 16 19 C -0.21 0.06 8.23 -39.43 -0.32 -0.27 16 20 C -0.07 0.00 8.66 -39.61 -0.34 -0.34 16 21 C -0.11 -0.12 5.42 -104.60 -0.57 -0.68 16 22 C -0.07 0.02 2.81 36.01 0.10 0.12 16 23 O -0.54 -0.59 12.74 -35.23 -0.45 -1.03 16 24 Si 0.68 -0.86 29.78 -169.99 -5.06 -5.92 16 25 C -0.05 -0.08 9.60 -39.61 -0.38 -0.46 16 26 C -0.15 -0.30 9.99 -39.43 -0.39 -0.70 16 27 C -0.10 0.14 6.80 -25.90 -0.18 -0.03 16 28 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 29 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 30 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.07 0.00 8.13 -51.93 -0.42 -0.42 16 32 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 33 H 0.09 -0.42 8.14 -51.93 -0.42 -0.84 16 34 H 0.10 -0.28 7.99 -51.93 -0.42 -0.69 16 35 H 0.38 -2.47 7.60 45.56 0.35 -2.13 16 36 H 0.09 -0.09 8.06 -51.93 -0.42 -0.51 16 37 H 0.09 -0.05 8.14 -51.93 -0.42 -0.47 16 38 H 0.40 -2.68 7.11 -40.82 -0.29 -2.97 16 39 H 0.10 -0.40 6.31 -51.93 -0.33 -0.73 16 40 H 0.08 -0.47 7.92 -51.93 -0.41 -0.88 16 41 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 42 H 0.08 -0.24 6.91 -51.93 -0.36 -0.60 16 43 H 0.13 -0.43 5.43 -52.49 -0.29 -0.71 16 44 H 0.13 -0.28 4.87 -52.48 -0.26 -0.54 16 45 H 0.08 -0.14 7.96 -51.93 -0.41 -0.55 16 46 H 0.38 -1.08 8.74 45.56 0.40 -0.68 16 47 H -0.26 -0.46 7.11 56.52 0.40 -0.05 16 48 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 49 H 0.13 0.07 8.06 -52.49 -0.42 -0.35 16 50 H 0.14 0.21 8.06 -52.49 -0.42 -0.21 16 51 H 0.11 -0.08 7.39 -51.93 -0.38 -0.47 16 52 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 LS Contribution 429.87 15.07 6.48 6.48 Total: 0.00 -12.57 429.87 -10.19 -22.77 By element: Atomic # 1 Polarization: -10.52 SS G_CDS: -7.09 Total: -17.60 kcal Atomic # 6 Polarization: 1.86 SS G_CDS: -1.99 Total: -0.13 kcal Atomic # 7 Polarization: 2.30 SS G_CDS: -0.32 Total: 1.98 kcal Atomic # 8 Polarization: -5.36 SS G_CDS: -2.22 Total: -7.58 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.06 Total: -5.92 kcal Total LS contribution 6.48 Total: 6.48 kcal Total: -12.57 -10.19 -22.77 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_10157680.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -151.584 kcal (2) G-P(sol) polarization free energy of solvation -12.572 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -164.155 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.194 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.765 kcal (6) G-S(sol) free energy of system = (1) + (5) -174.349 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds