Wall clock time and date at job start Sun Mar 7 2021 07:01:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45199 * 109.46818 * 2 1 4 4 C 1.34232 * 116.99946 * 180.02562 * 3 2 1 5 5 O 1.20820 * 120.00068 * 0.02562 * 4 3 2 6 6 C 1.50707 * 120.00279 * 180.02562 * 4 3 2 7 7 H 1.09000 * 112.84513 * 311.20336 * 6 4 3 8 8 C 1.53784 * 113.61088 * 82.50133 * 6 4 3 9 9 C 1.53788 * 87.07502 * 139.98550 * 8 6 4 10 10 O 1.42892 * 113.61256 * 89.11908 * 9 8 6 11 11 C 1.53004 * 113.68837 * 220.00628 * 9 8 6 12 12 N 1.46499 * 109.46951 * 282.54059 * 11 9 8 13 13 C 1.34779 * 119.99664 * 179.97438 * 12 11 9 14 14 O 1.21286 * 120.00171 * 0.02562 * 13 12 11 15 15 C 1.50701 * 119.99875 * 179.97438 * 13 12 11 16 16 C 1.53000 * 109.47068 * 65.00492 * 15 13 12 17 17 O 1.42901 * 109.46976 * 184.99974 * 15 13 12 18 18 C 1.35905 * 116.99784 * 155.32523 * 17 15 13 19 19 C 1.38735 * 120.05523 * 5.08836 * 18 17 15 20 20 C 1.38138 * 119.94150 * 179.74580 * 19 18 17 21 21 C 1.38266 * 120.05771 * 0.50558 * 20 19 18 22 22 C 1.50700 * 119.94527 * 179.74920 * 21 20 19 23 23 O 1.42904 * 109.47413 * 120.02121 * 22 21 20 24 24 Si 1.86300 * 109.47266 * 0.02562 * 22 21 20 25 25 C 1.38266 * 120.11029 * 359.76869 * 21 20 19 26 26 C 1.38143 * 120.05694 * 359.97438 * 25 21 20 27 27 C 1.53776 * 113.61702 * 180.02562 * 6 4 3 28 28 H 1.09006 * 109.46992 * 180.02562 * 1 2 3 29 29 H 1.08999 * 109.47647 * 59.99544 * 1 2 3 30 30 H 1.09004 * 109.47030 * 299.99471 * 1 2 3 31 31 H 1.08999 * 109.47647 * 120.00456 * 2 1 3 32 32 H 1.09004 * 109.47030 * 240.00529 * 2 1 3 33 33 H 1.08996 * 113.61439 * 254.53055 * 8 6 4 34 34 H 1.08996 * 113.61397 * 25.43917 * 8 6 4 35 35 H 0.96699 * 114.00403 * 82.50125 * 10 9 8 36 36 H 1.09004 * 109.46979 * 42.53630 * 11 9 8 37 37 H 1.08993 * 109.46861 * 162.53669 * 11 9 8 38 38 H 0.96997 * 120.00631 * 359.97438 * 12 11 9 39 39 H 1.08997 * 109.47163 * 305.00359 * 15 13 12 40 40 H 1.08998 * 109.46731 * 300.00040 * 16 15 13 41 41 H 1.09005 * 109.47242 * 59.99568 * 16 15 13 42 42 H 1.08999 * 109.47436 * 179.97438 * 16 15 13 43 43 H 1.07998 * 120.02339 * 359.97438 * 19 18 17 44 44 H 1.08005 * 119.97400 * 180.23261 * 20 19 18 45 45 H 1.08996 * 109.47291 * 240.01924 * 22 21 20 46 46 H 0.96693 * 114.00227 * 180.02562 * 23 22 21 47 47 H 1.48500 * 109.99951 * 60.00264 * 24 22 21 48 48 H 1.48498 * 110.00033 * 181.31825 * 24 22 21 49 49 H 1.08000 * 119.96909 * 179.97438 * 25 21 20 50 50 H 1.07997 * 120.02686 * 179.97438 * 26 25 21 51 51 H 1.09000 * 113.61261 * 334.56659 * 27 6 4 52 52 H 1.08997 * 113.61460 * 105.38862 * 27 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5449 -0.0005 5 8 4.0807 0.5868 -0.0015 6 6 3.9207 2.9375 0.0000 7 1 3.4706 3.5820 -0.7551 8 6 3.9868 3.5762 1.3974 9 6 5.3568 4.1420 0.9876 10 8 5.2816 5.4200 0.3528 11 6 6.4009 4.0942 2.1050 12 7 6.1487 5.1800 3.0556 13 6 6.9483 5.3346 4.1296 14 8 7.8768 4.5751 4.3087 15 6 6.6893 6.4518 5.1072 16 6 5.3442 6.2224 5.7992 17 8 7.7300 6.4790 6.0861 18 6 7.9611 7.6650 6.7081 19 6 7.1349 8.7518 6.4611 20 6 7.3688 9.9547 7.0986 21 6 8.4315 10.0792 7.9743 22 6 8.6877 11.3944 8.6641 23 8 8.6120 11.2126 10.0795 24 14 7.4069 12.6366 8.1283 25 6 9.2598 8.9992 8.2179 26 6 9.0270 7.7926 7.5869 27 6 5.4581 2.9683 -0.0013 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3633 0.5138 0.8901 31 1 1.8934 -0.5139 0.8899 32 1 1.8933 -0.5138 -0.8901 33 1 3.2298 4.3426 1.5635 34 1 4.0394 2.8491 2.2077 35 1 5.2177 6.1623 0.9693 36 1 6.3364 3.1366 2.6217 37 1 7.3966 4.2099 1.6770 38 1 5.4064 5.7877 2.9122 39 1 6.6664 7.4026 4.5747 40 1 4.5504 6.2016 5.0525 41 1 5.3670 5.2715 6.3317 42 1 5.1570 7.0302 6.5066 43 1 6.3074 8.6562 5.7737 44 1 6.7237 10.8000 6.9095 45 1 9.6802 11.7574 8.3971 46 1 8.7667 12.0200 10.5886 47 1 6.0494 12.1532 8.4870 48 1 7.6674 13.9467 8.7771 49 1 10.0895 9.0992 8.9020 50 1 9.6745 6.9495 7.7772 51 1 5.9130 2.0749 0.4265 52 1 5.8885 3.2427 -0.9644 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16466198_10157680.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:01:25 Heat of formation + Delta-G solvation = -178.656648 kcal Electronic energy + Delta-G solvation = -34428.739038 eV Core-core repulsion = 29554.769327 eV Total energy + Delta-G solvation = -4873.969711 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -42.18029 -41.75026 -40.85651 -40.11704 -38.96616 -37.77158 -37.34834 -36.02502 -35.48223 -33.43938 -32.67701 -31.91912 -31.68329 -29.57707 -27.03945 -26.76018 -26.38580 -25.09556 -24.09635 -23.68003 -22.35063 -21.94046 -21.48857 -20.76710 -19.50185 -19.28059 -18.69850 -18.50985 -17.78524 -17.48597 -17.40952 -17.36411 -16.91086 -16.77459 -16.53158 -16.25425 -15.92402 -15.74779 -15.53745 -15.18565 -15.14704 -14.80772 -14.58550 -14.49475 -14.27474 -14.17542 -14.00400 -13.81219 -13.74664 -13.50915 -13.45244 -13.34102 -13.24893 -12.98119 -12.89732 -12.77730 -12.56993 -12.44879 -12.26933 -12.10018 -11.92635 -11.76182 -11.68045 -11.58387 -11.46313 -10.98560 -10.89170 -10.47022 -10.34072 -10.03171 -9.20467 -4.90719 0.26932 0.30974 1.04393 1.33525 1.37418 1.41030 1.63213 1.63411 1.97843 2.43796 2.61953 2.86664 3.10784 3.32070 3.40997 3.42305 3.45054 3.54223 3.68149 3.80780 3.83181 3.86023 3.90578 3.95002 3.99243 4.02635 4.21177 4.28952 4.30122 4.31496 4.36888 4.44312 4.59092 4.60423 4.61564 4.66976 4.69808 4.72548 4.80110 4.87044 4.87936 4.91409 4.96975 5.10005 5.11384 5.12957 5.15117 5.19857 5.24999 5.41350 5.50971 5.69135 6.20490 6.39226 6.60952 6.63320 6.67099 7.03518 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.469 3.531 5 O -0.540 6.540 6 C -0.101 4.101 7 H 0.146 0.854 8 C -0.135 4.135 9 C 0.118 3.882 10 O -0.537 6.537 11 C 0.107 3.893 12 N -0.704 5.704 13 C 0.519 3.481 14 O -0.569 6.569 15 C 0.063 3.937 16 C -0.175 4.175 17 O -0.315 6.315 18 C 0.121 3.879 19 C -0.199 4.199 20 C -0.076 4.076 21 C -0.124 4.124 22 C -0.086 4.086 23 O -0.561 6.561 24 Si 0.769 3.231 25 C -0.061 4.061 26 C -0.168 4.168 27 C -0.111 4.111 28 H 0.095 0.905 29 H 0.069 0.931 30 H 0.070 0.930 31 H 0.067 0.933 32 H 0.066 0.934 33 H 0.117 0.883 34 H 0.094 0.906 35 H 0.395 0.605 36 H 0.074 0.926 37 H 0.069 0.931 38 H 0.420 0.580 39 H 0.137 0.863 40 H 0.116 0.884 41 H 0.055 0.945 42 H 0.085 0.915 43 H 0.168 0.832 44 H 0.153 0.847 45 H 0.091 0.909 46 H 0.394 0.606 47 H -0.294 1.294 48 H -0.290 1.290 49 H 0.133 0.867 50 H 0.126 0.874 51 H 0.101 0.899 52 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.038 7.187 -3.251 10.572 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.276 6.276 4 C 0.313 3.687 5 O -0.430 6.430 6 C -0.120 4.120 7 H 0.164 0.836 8 C -0.172 4.172 9 C 0.076 3.924 10 O -0.346 6.346 11 C -0.017 4.017 12 N -0.360 5.360 13 C 0.304 3.696 14 O -0.446 6.446 15 C 0.004 3.996 16 C -0.232 4.232 17 O -0.228 6.228 18 C 0.076 3.924 19 C -0.218 4.218 20 C -0.093 4.093 21 C -0.124 4.124 22 C -0.194 4.194 23 O -0.371 6.371 24 Si 0.674 3.326 25 C -0.080 4.080 26 C -0.186 4.186 27 C -0.148 4.148 28 H 0.113 0.887 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.085 0.915 32 H 0.084 0.916 33 H 0.136 0.864 34 H 0.113 0.887 35 H 0.247 0.753 36 H 0.093 0.907 37 H 0.088 0.912 38 H 0.259 0.741 39 H 0.154 0.846 40 H 0.134 0.866 41 H 0.074 0.926 42 H 0.104 0.896 43 H 0.185 0.815 44 H 0.170 0.830 45 H 0.109 0.891 46 H 0.244 0.756 47 H -0.221 1.221 48 H -0.218 1.218 49 H 0.151 0.849 50 H 0.144 0.856 51 H 0.120 0.880 52 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -6.816 5.696 -3.575 9.575 hybrid contribution 0.435 -0.016 1.746 1.799 sum -6.381 5.680 -1.830 8.736 Atomic orbital electron populations 1.21823 0.90606 1.04245 1.03816 1.23252 0.96998 0.79435 1.02392 1.86526 1.24275 1.33370 1.83387 1.24135 0.80531 0.93066 0.70950 1.90674 1.61192 1.44322 1.46840 1.22546 0.96805 0.89577 1.03060 0.83627 1.23657 0.98371 1.01194 0.94004 1.22038 0.93330 0.85429 0.91599 1.86593 1.96178 1.14617 1.37175 1.21871 0.99504 0.91079 0.89218 1.45490 1.33043 1.33535 1.23977 1.20554 0.81681 0.85411 0.81907 1.90780 1.31992 1.46511 1.75324 1.22470 0.88504 0.99426 0.89193 1.22403 0.93806 1.03953 1.03039 1.86197 1.54055 1.30478 1.52068 1.19201 0.94828 0.84850 0.93540 1.21480 1.02571 0.92380 1.05319 1.21022 0.95568 0.97672 0.95068 1.19456 0.97604 0.95412 0.99953 1.25051 1.09894 1.01391 0.83113 1.86549 1.94445 1.39067 1.17010 0.94228 0.74744 0.73335 0.90244 1.20910 0.98960 0.91166 0.96925 1.20617 0.98634 0.99212 1.00169 1.23084 0.93478 0.97051 1.01233 0.88667 0.91207 0.91094 0.91462 0.91581 0.86450 0.88736 0.75344 0.90739 0.91222 0.74120 0.84570 0.86580 0.92570 0.89603 0.81500 0.82960 0.89108 0.75608 1.22115 1.21790 0.84928 0.85583 0.88032 0.88887 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.61 10.29 71.98 0.74 1.35 16 2 C 0.05 0.04 6.19 71.98 0.45 0.48 16 3 O -0.36 -0.99 10.22 -51.43 -0.53 -1.52 16 4 C 0.47 1.70 7.48 71.24 0.53 2.24 16 5 O -0.54 -5.60 15.65 21.98 0.34 -5.26 16 6 C -0.10 0.32 4.19 -11.01 -0.05 0.28 16 7 H 0.15 -0.84 8.14 -2.39 -0.02 -0.86 16 8 C -0.13 1.06 7.02 31.12 0.22 1.28 16 9 C 0.12 -0.80 1.41 -10.25 -0.01 -0.81 16 10 O -0.54 4.33 13.41 -148.98 -2.00 2.33 16 11 C 0.11 -0.39 5.26 86.38 0.45 0.06 16 12 N -0.70 5.18 5.28 -463.05 -2.44 2.74 16 13 C 0.52 0.71 7.18 87.66 0.63 1.34 16 14 O -0.57 -7.86 16.51 15.94 0.26 -7.60 16 15 C 0.06 -0.21 2.64 29.85 0.08 -0.13 16 16 C -0.17 1.37 9.12 71.98 0.66 2.03 16 17 O -0.31 -1.94 9.34 -73.49 -0.69 -2.63 16 18 C 0.12 0.50 6.60 22.51 0.15 0.65 16 19 C -0.20 0.40 8.23 22.36 0.18 0.59 16 20 C -0.08 0.11 8.66 22.25 0.19 0.30 16 21 C -0.12 -0.25 5.42 -19.85 -0.11 -0.36 16 22 C -0.09 0.08 2.81 71.24 0.20 0.28 16 23 O -0.56 -1.30 12.74 -148.98 -1.90 -3.20 16 24 Si 0.77 -2.81 29.78 68.60 2.04 -0.76 16 25 C -0.06 -0.27 9.60 22.25 0.21 -0.06 16 26 C -0.17 -1.02 9.99 22.37 0.22 -0.80 16 27 C -0.11 0.25 6.80 31.13 0.21 0.46 16 28 H 0.09 -0.64 8.14 -2.38 -0.02 -0.66 16 29 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 30 H 0.07 -0.32 8.14 -2.38 -0.02 -0.34 16 31 H 0.07 0.08 8.13 -2.39 -0.02 0.06 16 32 H 0.07 0.10 8.13 -2.38 -0.02 0.08 16 33 H 0.12 -1.48 8.14 -2.39 -0.02 -1.50 16 34 H 0.09 -0.60 7.99 -2.39 -0.02 -0.62 16 35 H 0.40 -6.42 7.60 -74.06 -0.56 -6.98 16 36 H 0.07 -0.05 8.06 -2.38 -0.02 -0.07 16 37 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 38 H 0.42 -6.89 7.11 -92.71 -0.66 -7.55 16 39 H 0.14 -1.46 6.31 -2.39 -0.02 -1.47 16 40 H 0.12 -1.80 7.92 -2.39 -0.02 -1.82 16 41 H 0.06 -0.15 8.14 -2.38 -0.02 -0.17 16 42 H 0.09 -0.71 6.91 -2.39 -0.02 -0.73 16 43 H 0.17 -1.64 5.43 -2.91 -0.02 -1.65 16 44 H 0.15 -1.03 4.87 -2.91 -0.01 -1.04 16 45 H 0.09 -0.39 7.96 -2.39 -0.02 -0.41 16 46 H 0.39 -2.23 8.74 -74.06 -0.65 -2.87 16 47 H -0.29 -0.82 7.11 99.48 0.71 -0.11 16 48 H -0.29 -0.32 7.11 99.48 0.71 0.39 16 49 H 0.13 0.41 8.06 -2.91 -0.02 0.39 16 50 H 0.13 0.82 8.06 -2.91 -0.02 0.79 16 51 H 0.10 0.05 7.39 -2.39 -0.02 0.04 16 52 H 0.09 -0.18 8.14 -2.39 -0.02 -0.20 16 Total: 0.00 -33.54 429.87 -0.79 -34.33 By element: Atomic # 1 Polarization: -26.76 SS G_CDS: -0.85 Total: -27.61 kcal Atomic # 6 Polarization: 4.22 SS G_CDS: 4.96 Total: 9.18 kcal Atomic # 7 Polarization: 5.18 SS G_CDS: -2.44 Total: 2.74 kcal Atomic # 8 Polarization: -13.37 SS G_CDS: -4.50 Total: -17.87 kcal Atomic # 14 Polarization: -2.81 SS G_CDS: 2.04 Total: -0.76 kcal Total: -33.54 -0.79 -34.33 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16466198_10157680.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -144.328 kcal (2) G-P(sol) polarization free energy of solvation -33.536 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -177.865 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.792 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.328 kcal (6) G-S(sol) free energy of system = (1) + (5) -178.657 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds